RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 UBOX5O94941 541 aa10.24□□□□□ -0.77
HDAC8-217ENST00000478743 HOXB1P14653 301 aaPredicted RBP10.24□□□□□ -0.77
HDAC8-217ENST00000478743 PAX7P23759 505 aa10.24□□□□□ -0.77
HDAC8-217ENST00000478743 RYKP34925 604 aa10.24□□□□□ -0.77
HDAC8-217ENST00000478743 SPRP35270 261 aaPredicted RBP10.24□□□□□ -0.77
HDAC8-217ENST00000478743 APOBEC1P41238 236 aaKnown RBP10.24□□□□□ -0.77
HDAC8-217ENST00000478743 MAPK14Q16539 360 aa10.24□□□□□ -0.77
HDAC8-217ENST00000478743 FAM83EQ2M2I3 478 aa10.24□□□□□ -0.77
HDAC8-217ENST00000478743 CEACAM16Q2WEN9 425 aa10.24□□□□□ -0.77
HDAC8-217ENST00000478743 PHYHD1Q5SRE7 291 aa10.24□□□□□ -0.77
HDAC8-217ENST00000478743 CASC10Q5T4H9 136 aa10.24□□□□□ -0.77
HDAC8-217ENST00000478743 EMBQ6PCB8 327 aa10.24□□□□□ -0.77
HDAC8-217ENST00000478743 CREB3L2Q70SY1 520 aa10.24□□□□□ -0.77
HDAC8-217ENST00000478743 HMGN2P46Q86SG4 172 aa10.24□□□□□ -0.77
HDAC8-217ENST00000478743 CTAGE3PQ8IX95 158 aa10.24□□□□□ -0.77
HDAC8-217ENST00000478743 C1orf174Q8IYL3 243 aa10.24□□□□□ -0.77
HDAC8-217ENST00000478743 PAQR4Q8N4S7 273 aaPredicted RBP10.24□□□□□ -0.77
HDAC8-217ENST00000478743 TMEM86BQ8N661 226 aa10.24□□□□□ -0.77
HDAC8-217ENST00000478743 TMEM234Q8WY98 164 aa10.24□□□□□ -0.77
HDAC8-217ENST00000478743 DYRK2Q92630 601 aa10.24□□□□□ -0.77
HDAC8-217ENST00000478743 NAA11Q9BSU3 229 aaPredicted RBP10.24□□□□□ -0.77
HDAC8-217ENST00000478743 NMUR2Q9GZQ4 415 aa10.24□□□□□ -0.77
HDAC8-217ENST00000478743 C16orf95Q9H693 158 aa10.24□□□□□ -0.77
HDAC8-217ENST00000478743 GPR35Q9HC97 309 aa10.24□□□□□ -0.77
HDAC8-217ENST00000478743 NKIRAS2Q9NYR9 191 aa10.24□□□□□ -0.77
HDAC8-217ENST00000478743 GRHL1Q9NZI5 618 aa10.24□□□□□ -0.77
HDAC8-217ENST00000478743 FOXJ3Q9UPW0 622 aa10.24□□□□□ -0.77
HDAC8-217ENST00000478743 TRAPPC4Q9Y296 219 aa10.24□□□□□ -0.77
HDAC8-217ENST00000478743 TIMM22Q9Y584 194 aa10.24□□□□□ -0.77
HDAC8-217ENST00000478743 SPIN1Q9Y657 262 aaPredicted RBP10.24□□□□□ -0.77
HDAC8-217ENST00000478743 IGLV3-9A0A075B6K5 115 aa10.23□□□□□ -0.77
HDAC8-217ENST00000478743 ZNF816-ZNF321PA0A0X1KG74 233 aa10.23□□□□□ -0.77
HDAC8-217ENST00000478743 AGAP5A6NIR3 686 aa10.23□□□□□ -0.77
HDAC8-217ENST00000478743 AQP7P3A6NL99 342 aa10.23□□□□□ -0.77
HDAC8-217ENST00000478743 AP3D1O14617 1153 aa10.23□□□□□ -0.77
HDAC8-217ENST00000478743 KLHL2O95198 593 aa10.23□□□□□ -0.77
HDAC8-217ENST00000478743 HSPA4LO95757 839 aa10.23□□□□□ -0.77
HDAC8-217ENST00000478743 CSTAP01040 98 aa10.23□□□□□ -0.77
HDAC8-217ENST00000478743 SBK2P0C263 348 aa10.23□□□□□ -0.77
HDAC8-217ENST00000478743 OR8G3PP0DMU2 310 aa10.23□□□□□ -0.77
HDAC8-217ENST00000478743 CD79AP11912 226 aa10.23□□□□□ -0.77
HDAC8-217ENST00000478743 KRTAP10-11P60412 298 aa10.23□□□□□ -0.77
HDAC8-217ENST00000478743 TEKQ02763 1124 aa10.23□□□□□ -0.77
HDAC8-217ENST00000478743 OR7A5Q15622 319 aa10.23□□□□□ -0.77
HDAC8-217ENST00000478743 TRMT5Q32P41 509 aaKnown RBP10.23□□□□□ -0.77
HDAC8-217ENST00000478743 GRTP1Q5TC63 336 aa10.23□□□□□ -0.77
HDAC8-217ENST00000478743 FAM205BPQ63HN1 556 aa10.23□□□□□ -0.77
HDAC8-217ENST00000478743 GRINAQ7Z429 371 aa10.23□□□□□ -0.77
HDAC8-217ENST00000478743 ZNF584Q8IVC4 421 aa10.23□□□□□ -0.77
HDAC8-217ENST00000478743 FAM71CQ8NEG0 241 aa10.23□□□□□ -0.77
HDAC8-217ENST00000478743 IL17RDQ8NFM7 739 aa10.23□□□□□ -0.77
HDAC8-217ENST00000478743 ZNF563Q8TA94 476 aa10.23□□□□□ -0.77
HDAC8-217ENST00000478743 ADAMTS15Q8TE58 950 aa10.23□□□□□ -0.77
HDAC8-217ENST00000478743 DACT3Q96B18 629 aaPredicted RBP10.23□□□□□ -0.77
HDAC8-217ENST00000478743 DCLRE1CQ96SD1 692 aaKnown RBP10.23□□□□□ -0.77
HDAC8-217ENST00000478743 STACQ99469 402 aa10.23□□□□□ -0.77
HDAC8-217ENST00000478743 B9D2Q9BPU9 175 aa10.23□□□□□ -0.77
HDAC8-217ENST00000478743 HOXD1Q9GZZ0 328 aa10.23□□□□□ -0.77
HDAC8-217ENST00000478743 DENND2DQ9H6A0 471 aaPredicted RBP10.23□□□□□ -0.77
HDAC8-217ENST00000478743 PATZ1Q9HBE1 687 aaKnown RBP10.23□□□□□ -0.77
HDAC8-217ENST00000478743 MOV10Q9HCE1 1003 aaKnown RBP10.23□□□□□ -0.77
HDAC8-217ENST00000478743 NOX4Q9NPH5 578 aa10.23□□□□□ -0.77
HDAC8-217ENST00000478743 LZTFL1Q9NQ48 299 aa10.23□□□□□ -0.77
HDAC8-217ENST00000478743 ZCCHC3Q9NUD5 404 aaKnown RBP10.23□□□□□ -0.77
HDAC8-217ENST00000478743 SIRT5Q9NXA8 310 aa10.23□□□□□ -0.77
HDAC8-217ENST00000478743 SIGLEC9Q9Y336 463 aa10.23□□□□□ -0.77
HDAC8-217ENST00000478743 STAB2Q8WWQ8 2551 aa10.23□□□□□ -0.77
HDAC8-217ENST00000478743 TMED7-TICAM2A0A0A6YYA0 188 aa10.22□□□□□ -0.77
HDAC8-217ENST00000478743 LIPT2A6NK58 231 aa10.22□□□□□ -0.77
HDAC8-217ENST00000478743 NPIPB8E9PQR5 432 aa10.22□□□□□ -0.77
HDAC8-217ENST00000478743 RPL36A-HNRNPH2H7BZ11 118 aa10.22□□□□□ -0.77
HDAC8-217ENST00000478743 EIF1BO60739 113 aaKnown RBP10.22□□□□□ -0.77
HDAC8-217ENST00000478743 SLC43A1O75387 559 aa10.22□□□□□ -0.77
HDAC8-217ENST00000478743 URI1O94763 535 aaPredicted RBP10.22□□□□□ -0.77
HDAC8-217ENST00000478743 IGHV1-46P01743 117 aa10.22□□□□□ -0.77
HDAC8-217ENST00000478743 KRT6AP02538 564 aa10.22□□□□□ -0.77
HDAC8-217ENST00000478743 KRT6BP04259 564 aa10.22□□□□□ -0.77
HDAC8-217ENST00000478743 IGLL1P15814 213 aa10.22□□□□□ -0.77
HDAC8-217ENST00000478743 PGM1P36871 562 aa10.22□□□□□ -0.77
HDAC8-217ENST00000478743 FRKP42685 505 aaPredicted RBP10.22□□□□□ -0.77
HDAC8-217ENST00000478743 GSTM5P46439 218 aa10.22□□□□□ -0.77
HDAC8-217ENST00000478743 KRT6CP48668 564 aa10.22□□□□□ -0.77
HDAC8-217ENST00000478743 SH3BGRP55822 239 aaPredicted RBP10.22□□□□□ -0.77
HDAC8-217ENST00000478743 RPS23P62266 143 aaKnown RBP10.22□□□□□ -0.77
HDAC8-217ENST00000478743 CEACAM7Q14002 265 aa10.22□□□□□ -0.77
HDAC8-217ENST00000478743 HERPUD1Q15011 391 aa10.22□□□□□ -0.77
HDAC8-217ENST00000478743 GPR68Q15743 365 aa10.22□□□□□ -0.77
HDAC8-217ENST00000478743 PCGF3Q3KNV8 242 aa10.22□□□□□ -0.77
HDAC8-217ENST00000478743 MMEL1Q495T6 779 aa10.22□□□□□ -0.77
HDAC8-217ENST00000478743 RGS7BPQ6MZT1 257 aaPredicted RBP10.22□□□□□ -0.77
HDAC8-217ENST00000478743 OR5D16Q8NGK9 328 aa10.22□□□□□ -0.77
HDAC8-217ENST00000478743 GEMIN6Q8WXD5 167 aaKnown RBP10.22□□□□□ -0.77
HDAC8-217ENST00000478743 CDKL2Q92772 493 aa10.22□□□□□ -0.77
HDAC8-217ENST00000478743 DIRC2Q96SL1 478 aa10.22□□□□□ -0.77
HDAC8-217ENST00000478743 SF3B5Q9BWJ5 86 aaKnown RBP10.22□□□□□ -0.77
HDAC8-217ENST00000478743 LINC00470Q9BZP3 86 aa10.22□□□□□ -0.77
HDAC8-217ENST00000478743 DECR2Q9NUI1 292 aa10.22□□□□□ -0.77
HDAC8-217ENST00000478743 OSGIN1Q9UJX0 560 aa10.22□□□□□ -0.77
HDAC8-217ENST00000478743 TMED7Q9Y3B3 224 aa10.22□□□□□ -0.77
HDAC8-217ENST00000478743 POMT1Q9Y6A1 747 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms