RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 CANT1Q8WVQ1 401 aa12.89□□□□□ -0.35
USP11-207ENST00000478596 DNAJA4Q8WW22 397 aaPredicted RBP12.89□□□□□ -0.35
USP11-207ENST00000478596 ABTB1Q969K4 478 aaPredicted RBP12.89□□□□□ -0.35
USP11-207ENST00000478596 ZMYND19Q96E35 227 aaPredicted RBP12.89□□□□□ -0.35
USP11-207ENST00000478596 SLC41A3Q96GZ6 507 aa12.89□□□□□ -0.35
USP11-207ENST00000478596 MRGPRX4Q96LA9 322 aa12.89□□□□□ -0.35
USP11-207ENST00000478596 KLHDC3Q9BQ90 382 aa12.89□□□□□ -0.35
USP11-207ENST00000478596 PRR14Q9BWN1 585 aa12.89□□□□□ -0.35
USP11-207ENST00000478596 POLR2J2Q9GZM3 115 aaKnown RBP12.89□□□□□ -0.35
USP11-207ENST00000478596 POLR2J3Q9H1A7 115 aaKnown RBP12.89□□□□□ -0.35
USP11-207ENST00000478596 ACER3Q9NUN7 267 aa12.89□□□□□ -0.35
USP11-207ENST00000478596 RHCGQ9UBD6 479 aa12.89□□□□□ -0.35
USP11-207ENST00000478596 LAMP3Q9UQV4 416 aa12.89□□□□□ -0.35
USP11-207ENST00000478596 ENPP4Q9Y6X5 453 aa12.89□□□□□ -0.35
USP11-207ENST00000478596 A0A096LNT2 108 aa12.88□□□□□ -0.35
USP11-207ENST00000478596 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.88□□□□□ -0.35
USP11-207ENST00000478596 J3KTA2 159 aa12.88□□□□□ -0.35
USP11-207ENST00000478596 SEC14L5O43304 696 aa12.88□□□□□ -0.35
USP11-207ENST00000478596 ADAM11O75078 769 aa12.88□□□□□ -0.35
USP11-207ENST00000478596 FKBP6O75344 327 aa12.88□□□□□ -0.35
USP11-207ENST00000478596 E2F6O75461 281 aa12.88□□□□□ -0.35
USP11-207ENST00000478596 OR5F1O95221 314 aa12.88□□□□□ -0.35
USP11-207ENST00000478596 CPN1P15169 458 aa12.88□□□□□ -0.35
USP11-207ENST00000478596 SLC7A1P30825 629 aa12.88□□□□□ -0.35
USP11-207ENST00000478596 SFTPDP35247 375 aa12.88□□□□□ -0.35
USP11-207ENST00000478596 ACAA2P42765 397 aaKnown RBP12.88□□□□□ -0.35
USP11-207ENST00000478596 CDH12P55289 794 aa12.88□□□□□ -0.35
USP11-207ENST00000478596 BEX5Q5H9J7 111 aa12.88□□□□□ -0.35
USP11-207ENST00000478596 ZNF613Q6PF04 617 aa12.88□□□□□ -0.35
USP11-207ENST00000478596 ULK3Q6PHR2 472 aa12.88□□□□□ -0.35
USP11-207ENST00000478596 UBQLNLQ8IYU4 475 aa12.88□□□□□ -0.35
USP11-207ENST00000478596 GCNT2Q8N0V5 402 aa12.88□□□□□ -0.35
USP11-207ENST00000478596 PYDC1Q8WXC3 89 aa12.88□□□□□ -0.35
USP11-207ENST00000478596 ZNF300Q96RE9 604 aaPredicted RBP12.88□□□□□ -0.35
USP11-207ENST00000478596 ZNF347Q96SE7 839 aa12.88□□□□□ -0.35
USP11-207ENST00000478596 TUBA1CQ9BQE3 449 aa12.88□□□□□ -0.35
USP11-207ENST00000478596 WFDC6Q9BQY6 131 aa12.88□□□□□ -0.35
USP11-207ENST00000478596 TMEM204Q9BSN7 226 aa12.88□□□□□ -0.35
USP11-207ENST00000478596 DENND2DQ9H6A0 471 aaPredicted RBP12.88□□□□□ -0.35
USP11-207ENST00000478596 ELOVL5Q9NYP7 299 aa12.88□□□□□ -0.35
USP11-207ENST00000478596 MED12Q93074 2177 aa12.87□□□□□ -0.35
USP11-207ENST00000478596 TMED7-TICAM2A0A0A6YYA0 188 aa12.87□□□□□ -0.35
USP11-207ENST00000478596 A0A1W2PNV4 684 aa12.87□□□□□ -0.35
USP11-207ENST00000478596 OR2M5A3KFT3 312 aa12.87□□□□□ -0.35
USP11-207ENST00000478596 GJE1A6NN92 205 aa12.87□□□□□ -0.35
USP11-207ENST00000478596 B4DXG7 233 aa12.87□□□□□ -0.35
USP11-207ENST00000478596 C16orf97H3BN30 126 aa12.87□□□□□ -0.35
USP11-207ENST00000478596 KPNA4O00629 521 aaPredicted RBP12.87□□□□□ -0.35
USP11-207ENST00000478596 ADAMDEC1O15204 470 aa12.87□□□□□ -0.35
USP11-207ENST00000478596 KLF4O43474 513 aa12.87□□□□□ -0.35
USP11-207ENST00000478596 CHP2O43745 196 aa12.87□□□□□ -0.35
USP11-207ENST00000478596 TIPRLO75663 272 aa12.87□□□□□ -0.35
USP11-207ENST00000478596 ACTL6AO96019 429 aa12.87□□□□□ -0.35
USP11-207ENST00000478596 CST1P01037 141 aa12.87□□□□□ -0.35
USP11-207ENST00000478596 H1F0P07305 194 aaKnown RBP12.87□□□□□ -0.35
USP11-207ENST00000478596 PNMTP11086 282 aa12.87□□□□□ -0.35
USP11-207ENST00000478596 FCGR1AP12314 374 aa12.87□□□□□ -0.35
USP11-207ENST00000478596 RHCEP18577 417 aa12.87□□□□□ -0.35
USP11-207ENST00000478596 ELK4P28324 431 aa12.87□□□□□ -0.35
USP11-207ENST00000478596 GTF2E2P29084 291 aaKnown RBP12.87□□□□□ -0.35
USP11-207ENST00000478596 RRM2P31350 389 aa12.87□□□□□ -0.35
USP11-207ENST00000478596 APOBEC1P41238 236 aaKnown RBP12.87□□□□□ -0.35
USP11-207ENST00000478596 SMIM11AP58511 58 aa12.87□□□□□ -0.35
USP11-207ENST00000478596 ST3GAL3Q11203 375 aa12.87□□□□□ -0.35
USP11-207ENST00000478596 PIN1Q13526 163 aaPredicted RBP12.87□□□□□ -0.35
USP11-207ENST00000478596 TRAM2Q15035 370 aa12.87□□□□□ -0.35
USP11-207ENST00000478596 ZFP1Q6P2D0 407 aa12.87□□□□□ -0.35
USP11-207ENST00000478596 ZNF474Q6S9Z5 364 aaPredicted RBP12.87□□□□□ -0.35
USP11-207ENST00000478596 PLXDC2Q6UX71 529 aa12.87□□□□□ -0.35
USP11-207ENST00000478596 C22orf34Q6ZV56 151 aa12.87□□□□□ -0.35
USP11-207ENST00000478596 RRM2BQ7LG56 351 aa12.87□□□□□ -0.35
USP11-207ENST00000478596 OFCC1Q8IZS5 231 aa12.87□□□□□ -0.35
USP11-207ENST00000478596 GTPBP8Q8N3Z3 284 aaPredicted RBP12.87□□□□□ -0.35
USP11-207ENST00000478596 C10orf53Q8N6V4 93 aa12.87□□□□□ -0.35
USP11-207ENST00000478596 C3orf49Q96BT1 292 aa12.87□□□□□ -0.35
USP11-207ENST00000478596 DDIT4LQ96D03 193 aa12.87□□□□□ -0.35
USP11-207ENST00000478596 STARD4Q96DR4 205 aa12.87□□□□□ -0.35
USP11-207ENST00000478596 ZC3HAV1LQ96H79 300 aaKnown RBP12.87□□□□□ -0.35
USP11-207ENST00000478596 CHID1Q9BWS9 393 aa12.87□□□□□ -0.35
USP11-207ENST00000478596 RSPO3Q9BXY4 272 aaPredicted RBP12.87□□□□□ -0.35
USP11-207ENST00000478596 REEP1Q9H902 201 aa12.87□□□□□ -0.35
USP11-207ENST00000478596 IL1RAPQ9NPH3 570 aa12.87□□□□□ -0.35
USP11-207ENST00000478596 NDUFAF4Q9P032 175 aa12.87□□□□□ -0.35
USP11-207ENST00000478596 CLCF1Q9UBD9 225 aa12.87□□□□□ -0.35
USP11-207ENST00000478596 CHRNA9Q9UGM1 479 aa12.87□□□□□ -0.35
USP11-207ENST00000478596 RIMS3Q9UJD0 308 aa12.87□□□□□ -0.35
USP11-207ENST00000478596 TMED7Q9Y3B3 224 aa12.87□□□□□ -0.35
USP11-207ENST00000478596 AP4S1Q9Y587 144 aa12.87□□□□□ -0.35
USP11-207ENST00000478596 A0A0B4J2E0 115 aa12.86□□□□□ -0.35
USP11-207ENST00000478596 A0A1B0GX12 115 aa12.86□□□□□ -0.35
USP11-207ENST00000478596 C7orf72A4D263 438 aa12.86□□□□□ -0.35
USP11-207ENST00000478596 TMEM229AB2RXF0 380 aa12.86□□□□□ -0.35
USP11-207ENST00000478596 H0Y3Z8 333 aa12.86□□□□□ -0.35
USP11-207ENST00000478596 ENTPD5O75356 428 aa12.86□□□□□ -0.35
USP11-207ENST00000478596 GADD45GO95257 159 aa12.86□□□□□ -0.35
USP11-207ENST00000478596 IGHV4-39P01824 125 aa12.86□□□□□ -0.35
USP11-207ENST00000478596 SEMG1P04279 462 aa12.86□□□□□ -0.35
USP11-207ENST00000478596 CRHP06850 196 aa12.86□□□□□ -0.35
USP11-207ENST00000478596 CHMP24386 653 aa12.86□□□□□ -0.35
USP11-207ENST00000478596 SRYQ05066 204 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms