RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 KLHL28Q9NXS3 571 aa3.77□□□□□ -1.81
VPS50-214ENST00000477935 SPRR3Q9UBC9 169 aa3.77□□□□□ -1.81
VPS50-214ENST00000477935 PCSK1NQ9UHG2 260 aa3.77□□□□□ -1.81
VPS50-214ENST00000477935 LIPGQ9Y5X9 500 aa3.77□□□□□ -1.81
VPS50-214ENST00000477935 CMYA5Q8N3K9 4069 aa3.76□□□□□ -1.81
VPS50-214ENST00000477935 MED12Q93074 2177 aa3.76□□□□□ -1.81
VPS50-214ENST00000477935 IGHV4-30-2A0A087WSY4 118 aa3.76□□□□□ -1.81
VPS50-214ENST00000477935 PINLYPA6NC86 204 aa3.76□□□□□ -1.81
VPS50-214ENST00000477935 FRG2CA6NGY1 282 aa3.76□□□□□ -1.81
VPS50-214ENST00000477935 PES1O00541 588 aaKnown RBP3.76□□□□□ -1.81
VPS50-214ENST00000477935 STX7O15400 261 aaKnown RBP3.76□□□□□ -1.81
VPS50-214ENST00000477935 B4GALT2O60909 372 aa3.76□□□□□ -1.81
VPS50-214ENST00000477935 SRP72O76094 671 aaKnown RBP3.76□□□□□ -1.81
VPS50-214ENST00000477935 RCBTB2O95199 551 aa3.76□□□□□ -1.81
VPS50-214ENST00000477935 NSA2O95478 260 aaKnown RBP3.76□□□□□ -1.81
VPS50-214ENST00000477935 P04436 131 aa3.76□□□□□ -1.81
VPS50-214ENST00000477935 HLA-DQB2P05538 268 aa3.76□□□□□ -1.81
VPS50-214ENST00000477935 CRHP06850 196 aa3.76□□□□□ -1.81
VPS50-214ENST00000477935 CSN3P07498 182 aa3.76□□□□□ -1.81
VPS50-214ENST00000477935 CCDC166P0CW27 439 aa3.76□□□□□ -1.81
VPS50-214ENST00000477935 SAGP10523 405 aaPredicted RBP3.76□□□□□ -1.81
VPS50-214ENST00000477935 USF1P22415 310 aaPredicted RBP3.76□□□□□ -1.81
VPS50-214ENST00000477935 PSMA2P25787 234 aa3.76□□□□□ -1.81
VPS50-214ENST00000477935 LOXP28300 417 aaPredicted RBP3.76□□□□□ -1.81
VPS50-214ENST00000477935 MIPP30301 263 aa3.76□□□□□ -1.81
VPS50-214ENST00000477935 PKLRP30613 574 aa3.76□□□□□ -1.81
VPS50-214ENST00000477935 SRP14P37108 136 aaKnown RBP3.76□□□□□ -1.81
VPS50-214ENST00000477935 CD79BP40259 229 aa3.76□□□□□ -1.81
VPS50-214ENST00000477935 XCR1P46094 333 aa3.76□□□□□ -1.81
VPS50-214ENST00000477935 CYCSP99999 105 aaKnown RBP3.76□□□□□ -1.81
VPS50-214ENST00000477935 RCAN2Q14206 197 aa3.76□□□□□ -1.81
VPS50-214ENST00000477935 EFTUD2Q15029 972 aaKnown RBP eCLIP3.76□□□□□ -1.81
VPS50-214ENST00000477935 GPR33Q49SQ1 333 aa3.76□□□□□ -1.81
VPS50-214ENST00000477935 DNAJC21Q5F1R6 531 aaKnown RBP3.76□□□□□ -1.81
VPS50-214ENST00000477935 LCE3CQ5T5A8 94 aa3.76□□□□□ -1.81
VPS50-214ENST00000477935 PPP1R2P3Q6NXS1 205 aa3.76□□□□□ -1.81
VPS50-214ENST00000477935 TTC23LQ6PF05 361 aa3.76□□□□□ -1.81
VPS50-214ENST00000477935 RTL4Q6ZR62 310 aa3.76□□□□□ -1.81
VPS50-214ENST00000477935 FAM47EQ6ZV65 393 aa3.76□□□□□ -1.81
VPS50-214ENST00000477935 KIF2BQ8N4N8 673 aa3.76□□□□□ -1.81
VPS50-214ENST00000477935 KLHDC1Q8N7A1 406 aa3.76□□□□□ -1.81
VPS50-214ENST00000477935 LINC01555Q8NAE3 123 aa3.76□□□□□ -1.81
VPS50-214ENST00000477935 ZPLD1Q8TCW7 415 aa3.76□□□□□ -1.81
VPS50-214ENST00000477935 ZNF418Q8TF45 676 aaPredicted RBP3.76□□□□□ -1.81
VPS50-214ENST00000477935 IMP4Q96G21 291 aaKnown RBP3.76□□□□□ -1.81
VPS50-214ENST00000477935 MCEEQ96PE7 176 aa3.76□□□□□ -1.81
VPS50-214ENST00000477935 ZNF300Q96RE9 604 aaPredicted RBP3.76□□□□□ -1.81
VPS50-214ENST00000477935 C19orf43Q9BQ61 176 aa3.76□□□□□ -1.81
VPS50-214ENST00000477935 CCDC77Q9BR77 488 aa3.76□□□□□ -1.81
VPS50-214ENST00000477935 PRRG4Q9BZD6 226 aa3.76□□□□□ -1.81
VPS50-214ENST00000477935 SLC25A51Q9H1U9 297 aa3.76□□□□□ -1.81
VPS50-214ENST00000477935 ADAP2Q9NPF8 381 aa3.76□□□□□ -1.81
VPS50-214ENST00000477935 PARVAQ9NVD7 372 aa3.76□□□□□ -1.81
VPS50-214ENST00000477935 ETNK2Q9NVF9 386 aa3.76□□□□□ -1.81
VPS50-214ENST00000477935 STOX2Q9P2F5 926 aaPredicted RBP3.76□□□□□ -1.81
VPS50-214ENST00000477935 LIPT1Q9Y234 373 aa3.76□□□□□ -1.81
VPS50-214ENST00000477935 CR1P17927 2039 aa3.75□□□□□ -1.81
VPS50-214ENST00000477935 C15orf38-AP3S2A0A0A6YYH1 394 aa3.75□□□□□ -1.81
VPS50-214ENST00000477935 LOC285095A0A1B0GVY8 99 aa3.75□□□□□ -1.81
VPS50-214ENST00000477935 LRRD1A4D1F6 860 aa3.75□□□□□ -1.81
VPS50-214ENST00000477935 SAGE2PA6NJ88 616 aa3.75□□□□□ -1.81
VPS50-214ENST00000477935 SNURFLB1AK76 121 aa3.75□□□□□ -1.81
VPS50-214ENST00000477935 CSF3P09919 207 aa3.75□□□□□ -1.81
VPS50-214ENST00000477935 PNMA6AP0CW24 399 aaPredicted RBP3.75□□□□□ -1.81
VPS50-214ENST00000477935 ZNF10P21506 573 aaPredicted RBP3.75□□□□□ -1.81
VPS50-214ENST00000477935 PCMT1P22061 227 aa3.75□□□□□ -1.81
VPS50-214ENST00000477935 PRKACGP22612 351 aa3.75□□□□□ -1.81
VPS50-214ENST00000477935 CMPK1P30085 196 aa3.75□□□□□ -1.81
VPS50-214ENST00000477935 UGT2B10P36537 528 aa3.75□□□□□ -1.81
VPS50-214ENST00000477935 NDUFA8P51970 172 aa3.75□□□□□ -1.81
VPS50-214ENST00000477935 DSCR10P59022 87 aa3.75□□□□□ -1.81
VPS50-214ENST00000477935 KCNJ2P63252 427 aa3.75□□□□□ -1.81
VPS50-214ENST00000477935 TRAP1Q12931 704 aaKnown RBP3.75□□□□□ -1.81
VPS50-214ENST00000477935 PAFAH1B3Q15102 231 aaKnown RBP3.75□□□□□ -1.81
VPS50-214ENST00000477935 NPTX1Q15818 432 aa3.75□□□□□ -1.81
VPS50-214ENST00000477935 NHSL2Q5HYW2 709 aa3.75□□□□□ -1.81
VPS50-214ENST00000477935 VAX1Q5SQQ9 334 aa3.75□□□□□ -1.81
VPS50-214ENST00000477935 ARMC4Q5T2S8 1044 aa3.75□□□□□ -1.81
VPS50-214ENST00000477935 CCDC183Q5T5S1 534 aa3.75□□□□□ -1.81
VPS50-214ENST00000477935 NIPAL1Q6NVV3 410 aa3.75□□□□□ -1.81
VPS50-214ENST00000477935 KRT74Q7RTS7 529 aa3.75□□□□□ -1.81
VPS50-214ENST00000477935 LYG1Q8N1E2 194 aa3.75□□□□□ -1.81
VPS50-214ENST00000477935 B3GNT7Q8NFL0 401 aa3.75□□□□□ -1.81
VPS50-214ENST00000477935 OR2L3Q8NG85 312 aa3.75□□□□□ -1.81
VPS50-214ENST00000477935 OR7A2PQ8NGA2 310 aa3.75□□□□□ -1.81
VPS50-214ENST00000477935 GTF3AQ92664 365 aaKnown RBP3.75□□□□□ -1.81
VPS50-214ENST00000477935 MRPL24Q96A35 216 aaKnown RBP3.75□□□□□ -1.81
VPS50-214ENST00000477935 VPS33AQ96AX1 596 aa3.75□□□□□ -1.81
VPS50-214ENST00000477935 RAD51AP1Q96B01 352 aa3.75□□□□□ -1.81
VPS50-214ENST00000477935 TADA1Q96BN2 335 aa3.75□□□□□ -1.81
VPS50-214ENST00000477935 OMA1Q96E52 524 aa3.75□□□□□ -1.81
VPS50-214ENST00000477935 C11orf24Q96F05 449 aaPredicted RBP3.75□□□□□ -1.81
VPS50-214ENST00000477935 FAM111AQ96PZ2 611 aa3.75□□□□□ -1.81
VPS50-214ENST00000477935 OR2A5Q96R48 311 aa3.75□□□□□ -1.81
VPS50-214ENST00000477935 FICDQ9BVA6 458 aa3.75□□□□□ -1.81
VPS50-214ENST00000477935 OR10A4Q9H209 315 aa3.75□□□□□ -1.81
VPS50-214ENST00000477935 CCDC177Q9NQR7 707 aaPredicted RBP3.75□□□□□ -1.81
VPS50-214ENST00000477935 FAIMQ9NVQ4 179 aa3.75□□□□□ -1.81
VPS50-214ENST00000477935 AIPL1Q9NZN9 384 aa3.75□□□□□ -1.81
VPS50-214ENST00000477935 GIMAP2Q9UG22 337 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms