RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 CD3EP07766 207 aa13.64□□□□□ -0.23
COMMD6-209ENST00000477377 SOD3P08294 240 aa13.64□□□□□ -0.23
COMMD6-209ENST00000477377 HLA-DOBP13765 273 aa13.64□□□□□ -0.23
COMMD6-209ENST00000477377 PTNP21246 168 aa13.64□□□□□ -0.23
COMMD6-209ENST00000477377 CBLP22681 906 aa13.64□□□□□ -0.23
COMMD6-209ENST00000477377 MPGP29372 298 aa13.64□□□□□ -0.23
COMMD6-209ENST00000477377 VEZF1Q14119 521 aa13.64□□□□□ -0.23
COMMD6-209ENST00000477377 PGGHGQ32M88 737 aa13.64□□□□□ -0.23
COMMD6-209ENST00000477377 ZNF672Q499Z4 452 aaPredicted RBP13.64□□□□□ -0.23
COMMD6-209ENST00000477377 SWT1Q5T5J6 900 aaKnown RBP13.64□□□□□ -0.23
COMMD6-209ENST00000477377 ZNF613Q6PF04 617 aa13.64□□□□□ -0.23
COMMD6-209ENST00000477377 C1orf162Q8NEQ5 155 aaPredicted RBP13.64□□□□□ -0.23
COMMD6-209ENST00000477377 RCN3Q96D15 328 aa13.64□□□□□ -0.23
COMMD6-209ENST00000477377 OXGR1Q96P68 337 aa13.64□□□□□ -0.23
COMMD6-209ENST00000477377 PRSS27Q9BQR3 290 aa13.64□□□□□ -0.23
COMMD6-209ENST00000477377 TMEM43Q9BTV4 400 aa13.64□□□□□ -0.23
COMMD6-209ENST00000477377 ZNF426Q9BUY5 554 aa13.64□□□□□ -0.23
COMMD6-209ENST00000477377 GSX2Q9BZM3 304 aa13.64□□□□□ -0.23
COMMD6-209ENST00000477377 NELFAQ9H3P2 528 aa13.64□□□□□ -0.23
COMMD6-209ENST00000477377 SLC17A5Q9NRA2 495 aa13.64□□□□□ -0.23
COMMD6-209ENST00000477377 ZNF701Q9NV72 531 aaPredicted RBP13.64□□□□□ -0.23
COMMD6-209ENST00000477377 CMTM6Q9NX76 183 aa13.64□□□□□ -0.23
COMMD6-209ENST00000477377 UPB1Q9UBR1 384 aa13.64□□□□□ -0.23
COMMD6-209ENST00000477377 B3GALT5Q9Y2C3 310 aa13.64□□□□□ -0.23
COMMD6-209ENST00000477377 CAPN7Q9Y6W3 813 aa13.64□□□□□ -0.23
COMMD6-209ENST00000477377 CCT8L1PA6NM43 557 aa13.63□□□□□ -0.23
COMMD6-209ENST00000477377 CPSF4LA6NMK7 179 aaKnown RBP13.63□□□□□ -0.23
COMMD6-209ENST00000477377 OVOL3O00110 214 aa13.63□□□□□ -0.23
COMMD6-209ENST00000477377 CLOCKO15516 846 aa13.63□□□□□ -0.23
COMMD6-209ENST00000477377 TRAF3IP2O43734 574 aaPredicted RBP13.63□□□□□ -0.23
COMMD6-209ENST00000477377 CHP2O43745 196 aa13.63□□□□□ -0.23
COMMD6-209ENST00000477377 SMPD2O60906 423 aa13.63□□□□□ -0.23
COMMD6-209ENST00000477377 CD8AP01732 235 aa13.63□□□□□ -0.23
COMMD6-209ENST00000477377 SEC24CP53992 1094 aa13.63□□□□□ -0.23
COMMD6-209ENST00000477377 SPOCK1Q08629 439 aa13.63□□□□□ -0.23
COMMD6-209ENST00000477377 MAPRE2Q15555 327 aa13.63□□□□□ -0.23
COMMD6-209ENST00000477377 MMEL1Q495T6 779 aa13.63□□□□□ -0.23
COMMD6-209ENST00000477377 PHYHD1Q5SRE7 291 aa13.63□□□□□ -0.23
COMMD6-209ENST00000477377 SHEQ5VZ18 495 aa13.63□□□□□ -0.23
COMMD6-209ENST00000477377 OR7E24Q6IFN5 339 aa13.63□□□□□ -0.23
COMMD6-209ENST00000477377 NIPAL3Q6P499 406 aa13.63□□□□□ -0.23
COMMD6-209ENST00000477377 H1FNTQ75WM6 255 aaPredicted RBP13.63□□□□□ -0.23
COMMD6-209ENST00000477377 RANBP3LQ86VV4 465 aaPredicted RBP13.63□□□□□ -0.23
COMMD6-209ENST00000477377 POMGNT2Q8NAT1 580 aa13.63□□□□□ -0.23
COMMD6-209ENST00000477377 ADPRHL1Q8NDY3 354 aa13.63□□□□□ -0.23
COMMD6-209ENST00000477377 RP9Q8TA86 221 aaKnown RBP13.63□□□□□ -0.23
COMMD6-209ENST00000477377 VANGL1Q8TAA9 524 aaPredicted RBP13.63□□□□□ -0.23
COMMD6-209ENST00000477377 ADAMTS16Q8TE57 1224 aa13.63□□□□□ -0.23
COMMD6-209ENST00000477377 MUCL1Q96DR8 90 aa13.63□□□□□ -0.23
COMMD6-209ENST00000477377 SH3GL1Q99961 368 aa13.63□□□□□ -0.23
COMMD6-209ENST00000477377 ECSITQ9BQ95 431 aa13.63□□□□□ -0.23
COMMD6-209ENST00000477377 LINC00470Q9BZP3 86 aa13.63□□□□□ -0.23
COMMD6-209ENST00000477377 MYLK2Q9H1R3 596 aa13.63□□□□□ -0.23
COMMD6-209ENST00000477377 NGBQ9NPG2 151 aa13.63□□□□□ -0.23
COMMD6-209ENST00000477377 USF3Q68DE3 2245 aa13.63□□□□□ -0.23
COMMD6-209ENST00000477377 FAM220BPB1ANY3 271 aa13.62□□□□□ -0.23
COMMD6-209ENST00000477377 AIM2O14862 343 aa13.62□□□□□ -0.23
COMMD6-209ENST00000477377 TNFRSF1BP20333 461 aa13.62□□□□□ -0.23
COMMD6-209ENST00000477377 CD40P25942 277 aa13.62□□□□□ -0.23
COMMD6-209ENST00000477377 PTH2RP49190 550 aa13.62□□□□□ -0.23
COMMD6-209ENST00000477377 CLDN17P56750 224 aa13.62□□□□□ -0.23
COMMD6-209ENST00000477377 INTS11Q5TA45 600 aaKnown RBP13.62□□□□□ -0.23
COMMD6-209ENST00000477377 PRSS57Q6UWY2 283 aa13.62□□□□□ -0.23
COMMD6-209ENST00000477377 SSX8Q7RTT4 187 aa13.62□□□□□ -0.23
COMMD6-209ENST00000477377 SLC15A3Q8IY34 581 aa13.62□□□□□ -0.23
COMMD6-209ENST00000477377 C17orf78Q8N4C9 275 aa13.62□□□□□ -0.23
COMMD6-209ENST00000477377 ZNF837Q96EG3 531 aaPredicted RBP13.62□□□□□ -0.23
COMMD6-209ENST00000477377 TXNDC15Q96J42 360 aa13.62□□□□□ -0.23
COMMD6-209ENST00000477377 C1QTNF6Q9BXI9 259 aa13.62□□□□□ -0.23
COMMD6-209ENST00000477377 GSX1Q9H4S2 264 aaPredicted RBP13.62□□□□□ -0.23
COMMD6-209ENST00000477377 SLC13A4Q9UKG4 626 aa13.62□□□□□ -0.23
COMMD6-209ENST00000477377 LAMP3Q9UQV4 416 aa13.62□□□□□ -0.23
COMMD6-209ENST00000477377 RCE1Q9Y256 329 aa13.62□□□□□ -0.23
COMMD6-209ENST00000477377 RPL36A-HNRNPH2H7BZ11 118 aa13.61□□□□□ -0.23
COMMD6-209ENST00000477377 PLPP3O14495 311 aa13.61□□□□□ -0.23
COMMD6-209ENST00000477377 ABCD4O14678 606 aa13.61□□□□□ -0.23
COMMD6-209ENST00000477377 COX4I1P13073 169 aa13.61□□□□□ -0.23
COMMD6-209ENST00000477377 ZNF43P17038 809 aa13.61□□□□□ -0.23
COMMD6-209ENST00000477377 FUT4P22083 530 aa13.61□□□□□ -0.23
COMMD6-209ENST00000477377 ZNF83P51522 516 aa13.61□□□□□ -0.23
COMMD6-209ENST00000477377 NCALDP61601 193 aa13.61□□□□□ -0.23
COMMD6-209ENST00000477377 HIKESHIQ53FT3 197 aa13.61□□□□□ -0.23
COMMD6-209ENST00000477377 Q5PR19 223 aa13.61□□□□□ -0.23
COMMD6-209ENST00000477377 B3GLCTQ6Y288 498 aa13.61□□□□□ -0.23
COMMD6-209ENST00000477377 TMEM123Q8N131 208 aa13.61□□□□□ -0.23
COMMD6-209ENST00000477377 CIARTQ8N365 385 aaPredicted RBP13.61□□□□□ -0.23
COMMD6-209ENST00000477377 SCAIQ8N9R8 606 aa13.61□□□□□ -0.23
COMMD6-209ENST00000477377 PCYOX1LQ8NBM8 494 aa13.61□□□□□ -0.23
COMMD6-209ENST00000477377 OR1K1Q8NGR3 316 aa13.61□□□□□ -0.23
COMMD6-209ENST00000477377 SMAP2Q8WU79 429 aaPredicted RBP13.61□□□□□ -0.23
COMMD6-209ENST00000477377 BCL2L2Q92843 193 aaPredicted RBP13.61□□□□□ -0.23
COMMD6-209ENST00000477377 PERPQ96FX8 193 aa13.61□□□□□ -0.23
COMMD6-209ENST00000477377 ALKBH3Q96Q83 286 aaPredicted RBP13.61□□□□□ -0.23
COMMD6-209ENST00000477377 OR2M2Q96R28 347 aa13.61□□□□□ -0.23
COMMD6-209ENST00000477377 ELAC2Q9BQ52 826 aaKnown RBP13.61□□□□□ -0.23
COMMD6-209ENST00000477377 MEPEQ9NQ76 525 aaPredicted RBP13.61□□□□□ -0.23
COMMD6-209ENST00000477377 GID8Q9NWU2 228 aa13.61□□□□□ -0.23
COMMD6-209ENST00000477377 MRPL39Q9NYK5 338 aaKnown RBP13.61□□□□□ -0.23
COMMD6-209ENST00000477377 SLC7A7Q9UM01 511 aa13.61□□□□□ -0.23
COMMD6-209ENST00000477377 CORINQ9Y5Q5 1042 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms