RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 FREM1Q5H8C1 2179 aa9□□□□□ -0.97
CCM2-208ENST00000476594 LOC100653049A0A140TA62 436 aa8.99□□□□□ -0.97
CCM2-208ENST00000476594 TRAPPC13A5PLN9 417 aa8.99□□□□□ -0.97
CCM2-208ENST00000476594 FTCDNL1E5RQL4 147 aa8.99□□□□□ -0.97
CCM2-208ENST00000476594 M0R082 166 aa8.99□□□□□ -0.97
CCM2-208ENST00000476594 ABCD4O14678 606 aa8.99□□□□□ -0.97
CCM2-208ENST00000476594 TPST1O60507 370 aa8.99□□□□□ -0.97
CCM2-208ENST00000476594 FZD7O75084 574 aa8.99□□□□□ -0.97
CCM2-208ENST00000476594 ENTPD5O75356 428 aa8.99□□□□□ -0.97
CCM2-208ENST00000476594 KRT34O76011 436 aa8.99□□□□□ -0.97
CCM2-208ENST00000476594 OPN1SWP03999 348 aa8.99□□□□□ -0.97
CCM2-208ENST00000476594 ITGA5P08648 1049 aa8.99□□□□□ -0.97
CCM2-208ENST00000476594 BMP4P12644 408 aa8.99□□□□□ -0.97
CCM2-208ENST00000476594 HOXB1P14653 301 aaPredicted RBP8.99□□□□□ -0.97
CCM2-208ENST00000476594 HTR2AP28223 471 aa8.99□□□□□ -0.97
CCM2-208ENST00000476594 GRPRP30550 384 aa8.99□□□□□ -0.97
CCM2-208ENST00000476594 CDH11P55287 796 aa8.99□□□□□ -0.97
CCM2-208ENST00000476594 CLDN17P56750 224 aa8.99□□□□□ -0.97
CCM2-208ENST00000476594 ADAM8P78325 824 aa8.99□□□□□ -0.97
CCM2-208ENST00000476594 EGR4Q05215 589 aa8.99□□□□□ -0.97
CCM2-208ENST00000476594 FOXD4Q12950 439 aaPredicted RBP8.99□□□□□ -0.97
CCM2-208ENST00000476594 GABRA6Q16445 453 aa8.99□□□□□ -0.97
CCM2-208ENST00000476594 NRF1Q16656 503 aa8.99□□□□□ -0.97
CCM2-208ENST00000476594 ZNF672Q499Z4 452 aaPredicted RBP8.99□□□□□ -0.97
CCM2-208ENST00000476594 GLIPR1L2Q4G1C9 344 aa8.99□□□□□ -0.97
CCM2-208ENST00000476594 TSPO2Q5TGU0 170 aa8.99□□□□□ -0.97
CCM2-208ENST00000476594 TTC33Q6PID6 262 aaPredicted RBP8.99□□□□□ -0.97
CCM2-208ENST00000476594 SLC22A25Q6T423 547 aa8.99□□□□□ -0.97
CCM2-208ENST00000476594 CCDC80Q76M96 950 aa8.99□□□□□ -0.97
CCM2-208ENST00000476594 C10orf111Q8N326 155 aa8.99□□□□□ -0.97
CCM2-208ENST00000476594 ZNF417Q8TAU3 575 aa8.99□□□□□ -0.97
CCM2-208ENST00000476594 LZICQ8WZA0 190 aa8.99□□□□□ -0.97
CCM2-208ENST00000476594 KTI12Q96EK9 354 aaPredicted RBP8.99□□□□□ -0.97
CCM2-208ENST00000476594 PERPQ96FX8 193 aa8.99□□□□□ -0.97
CCM2-208ENST00000476594 ZNF385AQ96PM9 386 aaKnown RBP8.99□□□□□ -0.97
CCM2-208ENST00000476594 ZNF587Q96SQ5 575 aaPredicted RBP8.99□□□□□ -0.97
CCM2-208ENST00000476594 ARHGDIGQ99819 225 aa8.99□□□□□ -0.97
CCM2-208ENST00000476594 BDH2Q9BUT1 245 aa8.99□□□□□ -0.97
CCM2-208ENST00000476594 SLC19A3Q9BZV2 496 aa8.99□□□□□ -0.97
CCM2-208ENST00000476594 AMBRA1Q9C0C7 1298 aa8.99□□□□□ -0.97
CCM2-208ENST00000476594 SLC17A5Q9NRA2 495 aa8.99□□□□□ -0.97
CCM2-208ENST00000476594 NOX1Q9Y5S8 564 aa8.99□□□□□ -0.97
CCM2-208ENST00000476594 SLC25A15Q9Y619 301 aa8.99□□□□□ -0.97
CCM2-208ENST00000476594 MED13LQ71F56 2210 aa8.99□□□□□ -0.97
CCM2-208ENST00000476594 LOC102725191A0A1B0GVB3 256 aa8.98□□□□□ -0.97
CCM2-208ENST00000476594 CPSF4LA6NMK7 179 aaKnown RBP8.98□□□□□ -0.97
CCM2-208ENST00000476594 ZNF726A6NNF4 738 aa8.98□□□□□ -0.97
CCM2-208ENST00000476594 FAM220BPB1ANY3 271 aa8.98□□□□□ -0.97
CCM2-208ENST00000476594 M0R1B8 84 aa8.98□□□□□ -0.97
CCM2-208ENST00000476594 M0R3H8 397 aa8.98□□□□□ -0.97
CCM2-208ENST00000476594 PDLIM1O00151 329 aa8.98□□□□□ -0.97
CCM2-208ENST00000476594 FBP2O00757 339 aa8.98□□□□□ -0.97
CCM2-208ENST00000476594 HIST1H2ABP04908 130 aa8.98□□□□□ -0.97
CCM2-208ENST00000476594 EDNRAP25101 427 aa8.98□□□□□ -0.97
CCM2-208ENST00000476594 PTH2RP49190 550 aa8.98□□□□□ -0.97
CCM2-208ENST00000476594 ZNF83P51522 516 aa8.98□□□□□ -0.97
CCM2-208ENST00000476594 CDH12P55289 794 aa8.98□□□□□ -0.97
CCM2-208ENST00000476594 PUDPQ08623 228 aa8.98□□□□□ -0.97
CCM2-208ENST00000476594 PMS2P3Q13401 168 aa8.98□□□□□ -0.97
CCM2-208ENST00000476594 SELPLGQ14242 412 aa8.98□□□□□ -0.97
CCM2-208ENST00000476594 NPTX1Q15818 432 aa8.98□□□□□ -0.97
CCM2-208ENST00000476594 DUSP7Q16829 419 aa8.98□□□□□ -0.97
CCM2-208ENST00000476594 ENTPD8Q5MY95 495 aa8.98□□□□□ -0.97
CCM2-208ENST00000476594 C9orf135Q5VTT2 229 aa8.98□□□□□ -0.97
CCM2-208ENST00000476594 AGAP6Q5VW22 663 aa8.98□□□□□ -0.97
CCM2-208ENST00000476594 HIST3H2AQ7L7L0 130 aa8.98□□□□□ -0.97
CCM2-208ENST00000476594 YTHDF3Q7Z739 585 aaKnown RBP8.98□□□□□ -0.97
CCM2-208ENST00000476594 CCDC36Q8IYA8 594 aa8.98□□□□□ -0.97
CCM2-208ENST00000476594 KBTBD8Q8NFY9 601 aa8.98□□□□□ -0.97
CCM2-208ENST00000476594 OR2T12Q8NG77 320 aa8.98□□□□□ -0.97
CCM2-208ENST00000476594 VANGL1Q8TAA9 524 aaPredicted RBP8.98□□□□□ -0.97
CCM2-208ENST00000476594 ADAMTS16Q8TE57 1224 aa8.98□□□□□ -0.97
CCM2-208ENST00000476594 SMAP2Q8WU79 429 aaPredicted RBP8.98□□□□□ -0.97
CCM2-208ENST00000476594 HIST1H2ACQ93077 130 aa8.98□□□□□ -0.97
CCM2-208ENST00000476594 TAAR8Q969N4 342 aa8.98□□□□□ -0.97
CCM2-208ENST00000476594 CMTM5Q96DZ9 223 aa8.98□□□□□ -0.97
CCM2-208ENST00000476594 C18orf12Q96KH6 178 aa8.98□□□□□ -0.97
CCM2-208ENST00000476594 ALKBH3Q96Q83 286 aaPredicted RBP8.98□□□□□ -0.97
CCM2-208ENST00000476594 HOPXQ9BPY8 73 aaPredicted RBP8.98□□□□□ -0.97
CCM2-208ENST00000476594 PTDSS2Q9BVG9 487 aa8.98□□□□□ -0.97
CCM2-208ENST00000476594 BARX1Q9HBU1 254 aaPredicted RBP8.98□□□□□ -0.97
CCM2-208ENST00000476594 MRPL39Q9NYK5 338 aaKnown RBP8.98□□□□□ -0.97
CCM2-208ENST00000476594 CISD1Q9NZ45 108 aaKnown RBP8.98□□□□□ -0.97
CCM2-208ENST00000476594 LAMP3Q9UQV4 416 aa8.98□□□□□ -0.97
CCM2-208ENST00000476594 DSCAMO60469 2012 aa8.98□□□□□ -0.97
CCM2-208ENST00000476594 ARID1AO14497 2285 aa8.98□□□□□ -0.97
CCM2-208ENST00000476594 ROS1P08922 2347 aa8.98□□□□□ -0.97
CCM2-208ENST00000476594 MAP1AP78559 2803 aaPredicted RBP8.97□□□□□ -0.97
CCM2-208ENST00000476594 ELOVL7A1L3X0 281 aa8.97□□□□□ -0.97
CCM2-208ENST00000476594 DPRXA6NFQ7 191 aa8.97□□□□□ -0.97
CCM2-208ENST00000476594 PLAUP00749 431 aa8.97□□□□□ -0.97
CCM2-208ENST00000476594 UMPSP11172 480 aa8.97□□□□□ -0.97
CCM2-208ENST00000476594 PAX1P15863 534 aa8.97□□□□□ -0.97
CCM2-208ENST00000476594 CDH2P19022 906 aaPredicted RBP8.97□□□□□ -0.97
CCM2-208ENST00000476594 AHCYP23526 432 aa8.97□□□□□ -0.97
CCM2-208ENST00000476594 CD40P25942 277 aa8.97□□□□□ -0.97
CCM2-208ENST00000476594 SELENOPP49908 381 aa8.97□□□□□ -0.97
CCM2-208ENST00000476594 P2RY4P51582 365 aa8.97□□□□□ -0.97
CCM2-208ENST00000476594 ATP5J2P56134 94 aa8.97□□□□□ -0.97
CCM2-208ENST00000476594 TAS2R41P59536 307 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms