RNA–Protein interactions for RNA: ENST00000475049.5

SDHB-204, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 3

Gene SDHB, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-204ENST00000475049 NLRP9Q7RTR0 991 aa2.84□□□□□ -1.95
SDHB-204ENST00000475049 TBC1D21Q8IYX1 336 aa2.84□□□□□ -1.95
SDHB-204ENST00000475049 OR4K14Q8NGD5 310 aa2.84□□□□□ -1.95
SDHB-204ENST00000475049 CHCHD10Q8WYQ3 142 aaPredicted RBP2.84□□□□□ -1.95
SDHB-204ENST00000475049 UCN3Q969E3 161 aa2.84□□□□□ -1.95
SDHB-204ENST00000475049 TIMD4Q96H15 378 aa2.84□□□□□ -1.95
SDHB-204ENST00000475049 TMEM101Q96IK0 257 aa2.84□□□□□ -1.95
SDHB-204ENST00000475049 CLCC1Q96S66 551 aa2.84□□□□□ -1.95
SDHB-204ENST00000475049 SECISBP2Q96T21 854 aaKnown RBP2.84□□□□□ -1.95
SDHB-204ENST00000475049 HIST1H4GQ99525 98 aa2.84□□□□□ -1.95
SDHB-204ENST00000475049 NPAS2Q99743 824 aa2.84□□□□□ -1.95
SDHB-204ENST00000475049 TSG101Q99816 390 aa2.84□□□□□ -1.95
SDHB-204ENST00000475049 CCT7Q99832 543 aa2.84□□□□□ -1.95
SDHB-204ENST00000475049 SELENOIQ9C0D9 397 aa2.84□□□□□ -1.95
SDHB-204ENST00000475049 REEP4Q9H6H4 257 aa2.84□□□□□ -1.95
SDHB-204ENST00000475049 NHEJ1Q9H9Q4 299 aaPredicted RBP2.84□□□□□ -1.95
SDHB-204ENST00000475049 FOLH1BQ9HBA9 442 aa2.84□□□□□ -1.95
SDHB-204ENST00000475049 HOXC10Q9NYD6 342 aa2.84□□□□□ -1.95
SDHB-204ENST00000475049 ANAPC11Q9NYG5 84 aa2.84□□□□□ -1.95
SDHB-204ENST00000475049 RPS6KB2Q9UBS0 482 aa2.84□□□□□ -1.95
SDHB-204ENST00000475049 CDH9Q9ULB4 789 aa2.84□□□□□ -1.95
SDHB-204ENST00000475049 STAP1Q9ULZ2 295 aa2.84□□□□□ -1.95
SDHB-204ENST00000475049 TMCO1Q9UM00 188 aa2.84□□□□□ -1.95
SDHB-204ENST00000475049 CLEC4AQ9UMR7 237 aa2.84□□□□□ -1.95
SDHB-204ENST00000475049 SH3TC1Q8TE82 1336 aa2.84□□□□□ -1.96
SDHB-204ENST00000475049 TRANK1O15050 2925 aa2.84□□□□□ -1.96
SDHB-204ENST00000475049 RPAP1Q9BWH6 1393 aaPredicted RBP2.84□□□□□ -1.96
SDHB-204ENST00000475049 PLEKHG1Q9ULL1 1385 aa2.84□□□□□ -1.96
SDHB-204ENST00000475049 C10orf71Q711Q0 1435 aa2.84□□□□□ -1.96
SDHB-204ENST00000475049 PXDNLA1KZ92 1463 aa2.84□□□□□ -1.96
SDHB-204ENST00000475049 NEXMIFQ5QGS0 1516 aa2.83□□□□□ -1.96
SDHB-204ENST00000475049 THSD7BQ9C0I4 1608 aa2.83□□□□□ -1.96
SDHB-204ENST00000475049 PCP4L1A6NKN8 68 aa2.83□□□□□ -1.96
SDHB-204ENST00000475049 A8MUA0 341 aa2.83□□□□□ -1.96
SDHB-204ENST00000475049 TRIM49D1C9J1S8 452 aa2.83□□□□□ -1.96
SDHB-204ENST00000475049 SNNO75324 88 aaPredicted RBP2.83□□□□□ -1.96
SDHB-204ENST00000475049 STAMBPO95630 424 aa2.83□□□□□ -1.96
SDHB-204ENST00000475049 OXSR1O95747 527 aaPredicted RBP2.83□□□□□ -1.96
SDHB-204ENST00000475049 LGI1O95970 557 aa2.83□□□□□ -1.96
SDHB-204ENST00000475049 KLK3P07288 261 aaPredicted RBP2.83□□□□□ -1.96
SDHB-204ENST00000475049 NCK1P16333 377 aa2.83□□□□□ -1.96
SDHB-204ENST00000475049 HTR1EP28566 365 aa2.83□□□□□ -1.96
SDHB-204ENST00000475049 RFC4P35249 363 aa2.83□□□□□ -1.96
SDHB-204ENST00000475049 GRIA1P42261 906 aa2.83□□□□□ -1.96
SDHB-204ENST00000475049 TNNT2P45379 298 aaPredicted RBP2.83□□□□□ -1.96
SDHB-204ENST00000475049 CASP4P49662 377 aa2.83□□□□□ -1.96
SDHB-204ENST00000475049 KLK7P49862 253 aa2.83□□□□□ -1.96
SDHB-204ENST00000475049 GPM6AP51674 278 aa2.83□□□□□ -1.96
SDHB-204ENST00000475049 ARFIP1P53367 373 aa2.83□□□□□ -1.96
SDHB-204ENST00000475049 ASPHQ12797 758 aa2.83□□□□□ -1.96
SDHB-204ENST00000475049 ZNF630Q2M218 657 aaPredicted RBP2.83□□□□□ -1.96
SDHB-204ENST00000475049 KLF17Q5JT82 389 aaPredicted RBP2.83□□□□□ -1.96
SDHB-204ENST00000475049 GPRC6AQ5T6X5 926 aa2.83□□□□□ -1.96
SDHB-204ENST00000475049 OR4F3Q6IEY1 312 aa2.83□□□□□ -1.96
SDHB-204ENST00000475049 OR52E8Q6IFG1 317 aa2.83□□□□□ -1.96
SDHB-204ENST00000475049 PGAP1Q75T13 922 aa2.83□□□□□ -1.96
SDHB-204ENST00000475049 UTS2BQ765I0 119 aa2.83□□□□□ -1.96
SDHB-204ENST00000475049 MTERF4Q7Z6M4 381 aaKnown RBP2.83□□□□□ -1.96
SDHB-204ENST00000475049 RNF175Q8N4F7 328 aa2.83□□□□□ -1.96
SDHB-204ENST00000475049 CCDC71LQ8N9Z2 235 aa2.83□□□□□ -1.96
SDHB-204ENST00000475049 CATSPER1Q8NEC5 780 aa2.83□□□□□ -1.96
SDHB-204ENST00000475049 FANK1Q8TC84 345 aa2.83□□□□□ -1.96
SDHB-204ENST00000475049 BRSK1Q8TDC3 778 aa2.83□□□□□ -1.96
SDHB-204ENST00000475049 ANP32BQ92688 251 aaKnown RBP2.83□□□□□ -1.96
SDHB-204ENST00000475049 ELSPBP1Q96BH3 223 aa2.83□□□□□ -1.96
SDHB-204ENST00000475049 RPUSD4Q96CM3 377 aaKnown RBP2.83□□□□□ -1.96
SDHB-204ENST00000475049 PAGE5Q96GU1 130 aa2.83□□□□□ -1.96
SDHB-204ENST00000475049 SLC38A2Q96QD8 506 aa2.83□□□□□ -1.96
SDHB-204ENST00000475049 RNF2Q99496 336 aa2.83□□□□□ -1.96
SDHB-204ENST00000475049 TMEM43Q9BTV4 400 aa2.83□□□□□ -1.96
SDHB-204ENST00000475049 SUDS3Q9H7L9 328 aaPredicted RBP2.83□□□□□ -1.96
SDHB-204ENST00000475049 SLC25A22Q9H936 323 aa2.83□□□□□ -1.96
SDHB-204ENST00000475049 SMOXQ9NWM0 555 aa2.83□□□□□ -1.96
SDHB-204ENST00000475049 THUMPD1Q9NXG2 353 aaKnown RBP2.83□□□□□ -1.96
SDHB-204ENST00000475049 BFARQ9NZS9 450 aa2.83□□□□□ -1.96
SDHB-204ENST00000475049 KIF25Q9UIL4 384 aa2.83□□□□□ -1.96
SDHB-204ENST00000475049 POLDIP2Q9Y2S7 368 aa2.83□□□□□ -1.96
SDHB-204ENST00000475049 RPL36Q9Y3U8 105 aaKnown RBP2.83□□□□□ -1.96
SDHB-204ENST00000475049 CENPJQ9HC77 1338 aaPredicted RBP2.83□□□□□ -1.96
SDHB-204ENST00000475049 PLEKHH1Q9ULM0 1364 aa2.83□□□□□ -1.96
SDHB-204ENST00000475049 PREX2Q70Z35 1606 aa2.82□□□□□ -1.96
SDHB-204ENST00000475049 TNRC6CQ9HCJ0 1690 aaKnown RBP2.82□□□□□ -1.96
SDHB-204ENST00000475049 IGKV1D-8A0A087WSZ0 117 aa2.82□□□□□ -1.96
SDHB-204ENST00000475049 TRAV26-1A0A087WT03 109 aa2.82□□□□□ -1.96
SDHB-204ENST00000475049 IGHV1OR21-1A0A087WYE8 117 aa2.82□□□□□ -1.96
SDHB-204ENST00000475049 TCRBV9S1A1TA0A576 114 aa2.82□□□□□ -1.96
SDHB-204ENST00000475049 IGHG4P01861 327 aa2.82□□□□□ -1.96
SDHB-204ENST00000475049 POU2F1P14859 743 aa2.82□□□□□ -1.96
SDHB-204ENST00000475049 CXCR2P25025 360 aa2.82□□□□□ -1.96
SDHB-204ENST00000475049 PTGDSP41222 190 aa2.82□□□□□ -1.96
SDHB-204ENST00000475049 ACTR1AP61163 376 aa2.82□□□□□ -1.96
SDHB-204ENST00000475049 RPS14P62263 151 aaKnown RBP2.82□□□□□ -1.96
SDHB-204ENST00000475049 IL24Q13007 206 aa2.82□□□□□ -1.96
SDHB-204ENST00000475049 GPM6BQ13491 265 aa2.82□□□□□ -1.96
SDHB-204ENST00000475049 GRB7Q14451 532 aa2.82□□□□□ -1.96
SDHB-204ENST00000475049 BCL7AQ4VC05 210 aa2.82□□□□□ -1.96
SDHB-204ENST00000475049 PDZK1Q5T2W1 519 aa2.82□□□□□ -1.96
SDHB-204ENST00000475049 C11orf71Q6IPW1 123 aa2.82□□□□□ -1.96
SDHB-204ENST00000475049 CASC1Q6TDU7 716 aa2.82□□□□□ -1.96
SDHB-204ENST00000475049 TMIGD1Q6UXZ0 262 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms