RNA–Protein interactions for RNA: ENST00000474851.1

LSAMP-203, Transcript of limbic system associated membrane protein, humanhuman

TSL 5

Gene LSAMP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-203ENST00000474851 CCNA2P20248 432 aa6.36□□□□□ -1.39
LSAMP-203ENST00000474851 OR3A2P47893 321 aa6.36□□□□□ -1.39
LSAMP-203ENST00000474851 POLR2HP52434 150 aaKnown RBP6.36□□□□□ -1.39
LSAMP-203ENST00000474851 MAP2K6P52564 334 aa6.36□□□□□ -1.39
LSAMP-203ENST00000474851 SLC16A1P53985 500 aa6.36□□□□□ -1.39
LSAMP-203ENST00000474851 CSNK2A1P68400 391 aaPredicted RBP6.36□□□□□ -1.39
LSAMP-203ENST00000474851 LARS2Q15031 903 aaKnown RBP6.36□□□□□ -1.39
LSAMP-203ENST00000474851 P2RY6Q15077 328 aa6.36□□□□□ -1.39
LSAMP-203ENST00000474851 TSC22D1Q15714 1073 aa6.36□□□□□ -1.39
LSAMP-203ENST00000474851 ZSWIM7Q19AV6 140 aa6.36□□□□□ -1.39
LSAMP-203ENST00000474851 FAM209AQ5JX71 171 aa6.36□□□□□ -1.39
LSAMP-203ENST00000474851 SFRP5Q5T4F7 317 aa6.36□□□□□ -1.39
LSAMP-203ENST00000474851 ABLIM2Q6H8Q1 611 aa6.36□□□□□ -1.39
LSAMP-203ENST00000474851 C16orf87Q6PH81 154 aa6.36□□□□□ -1.39
LSAMP-203ENST00000474851 SEZ6L2Q6UXD5 910 aa6.36□□□□□ -1.39
LSAMP-203ENST00000474851 PAMR1Q6UXH9 720 aa6.36□□□□□ -1.39
LSAMP-203ENST00000474851 AMIGO2Q86SJ2 522 aa6.36□□□□□ -1.39
LSAMP-203ENST00000474851 SERPINA11Q86U17 422 aa6.36□□□□□ -1.39
LSAMP-203ENST00000474851 CXorf67Q86X51 503 aaPredicted RBP6.36□□□□□ -1.39
LSAMP-203ENST00000474851 ZNF440Q8IYI8 595 aa6.36□□□□□ -1.39
LSAMP-203ENST00000474851 ZIC4Q8N9L1 334 aa6.36□□□□□ -1.39
LSAMP-203ENST00000474851 PLPP7Q8NBV4 271 aa6.36□□□□□ -1.39
LSAMP-203ENST00000474851 SLC26A7Q8TE54 656 aa6.36□□□□□ -1.39
LSAMP-203ENST00000474851 TMIGD2Q96BF3 282 aa6.36□□□□□ -1.39
LSAMP-203ENST00000474851 C12orf43Q96C57 262 aaKnown RBP6.36□□□□□ -1.39
LSAMP-203ENST00000474851 ISOC1Q96CN7 298 aa6.36□□□□□ -1.39
LSAMP-203ENST00000474851 DNAJA3Q96EY1 480 aa6.36□□□□□ -1.39
LSAMP-203ENST00000474851 ZC3HAV1LQ96H79 300 aaKnown RBP6.36□□□□□ -1.39
LSAMP-203ENST00000474851 ZNF300Q96RE9 604 aaPredicted RBP6.36□□□□□ -1.39
LSAMP-203ENST00000474851 WFDC6Q9BQY6 131 aa6.36□□□□□ -1.39
LSAMP-203ENST00000474851 OSBPL10Q9BXB5 764 aa6.36□□□□□ -1.39
LSAMP-203ENST00000474851 HDHD5Q9BXW7 423 aa6.36□□□□□ -1.39
LSAMP-203ENST00000474851 POTEKPQ9BYX7 375 aa6.36□□□□□ -1.39
LSAMP-203ENST00000474851 ANKRD60Q9BZ19 345 aa6.36□□□□□ -1.39
LSAMP-203ENST00000474851 ACTR6Q9GZN1 396 aa6.36□□□□□ -1.39
LSAMP-203ENST00000474851 TMEM38AQ9H6F2 299 aa6.36□□□□□ -1.39
LSAMP-203ENST00000474851 ZNF226Q9NYT6 803 aa6.36□□□□□ -1.39
LSAMP-203ENST00000474851 TMEM181Q9P2C4 612 aa6.36□□□□□ -1.39
LSAMP-203ENST00000474851 CRNNQ9UBG3 495 aaPredicted RBP6.36□□□□□ -1.39
LSAMP-203ENST00000474851 PRSS50Q9UI38 385 aa6.36□□□□□ -1.39
LSAMP-203ENST00000474851 CELSR1Q9NYQ6 3014 aa6.36□□□□□ -1.39
LSAMP-203ENST00000474851 CACNA1CQ13936 2221 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 INTS1Q8N201 2190 aaKnown RBP6.35□□□□□ -1.39
LSAMP-203ENST00000474851 ZNF469Q96JG9 3925 aaPredicted RBP6.35□□□□□ -1.39
LSAMP-203ENST00000474851 TEP1Q99973 2627 aaKnown RBP6.35□□□□□ -1.39
LSAMP-203ENST00000474851 MTORP42345 2549 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 LOC105371267A0A1B0GV96 52 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 CCDC160A6NGH7 325 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 LIPT2A6NK58 231 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 KPNA4O00629 521 aaPredicted RBP6.35□□□□□ -1.39
LSAMP-203ENST00000474851 FRS3O43559 492 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 TPST2O60704 377 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 RAF1P04049 648 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 TFPIP10646 304 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 ATP6V1B1P15313 513 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 JUNBP17275 347 aaPredicted RBP6.35□□□□□ -1.39
LSAMP-203ENST00000474851 FPR1P21462 350 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 DNASE1P24855 282 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 PRKAR1BP31321 381 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 EIF2B2P49770 351 aaKnown RBP6.35□□□□□ -1.39
LSAMP-203ENST00000474851 P2RY4P51582 365 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 BMXP51813 675 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 OR2B6P58173 313 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 HOXC5Q00444 222 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 CDK6Q00534 326 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 IFITM2Q01629 132 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 EGR4Q05215 589 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 BNIP2Q12982 314 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 ITGADQ13349 1161 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 SELPLGQ14242 412 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 GK3PQ14409 553 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 SLC17A1Q14916 467 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 TAB1Q15750 504 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 RGS21Q2M5E4 152 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 DEFB113Q30KQ7 82 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 ZNF311Q5JNZ3 666 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 GCNT6Q5T4J0 391 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 WBP2NLQ6ICG8 309 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 Q6ZT83 130 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 VASH1Q7L8A9 365 aaPredicted RBP6.35□□□□□ -1.39
LSAMP-203ENST00000474851 GALNT5Q7Z7M9 940 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 ATG4DQ86TL0 474 aaPredicted RBP6.35□□□□□ -1.39
LSAMP-203ENST00000474851 STK32CQ86UX6 486 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 PTOV1Q86YD1 416 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 KRTAP1-3Q8IUG1 177 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 POU5F2Q8N7G0 328 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 STEAP2Q8NFT2 490 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 NFKBIDQ8NI38 313 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 ANGPTL6Q8NI99 470 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 BBS10Q8TAM1 723 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 TSPEARQ8WU66 669 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 IGFBPL1Q8WX77 278 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 C3orf49Q96BT1 292 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 S100PBPQ96BU1 408 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 PIK3IP1Q96FE7 263 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 MED30Q96HR3 178 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 CPPED1Q9BRF8 314 aaPredicted RBP6.35□□□□□ -1.39
LSAMP-203ENST00000474851 TMEM204Q9BSN7 226 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 RAD21L1Q9H4I0 556 aa6.35□□□□□ -1.39
LSAMP-203ENST00000474851 KAT8Q9H7Z6 458 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms