RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 SQLEQ14534 574 aa17.79■□□□□ 0.44
PDLIM4-206ENST00000474421 TBRG1Q3YBR2 411 aa17.79■□□□□ 0.44
PDLIM4-206ENST00000474421 HIKESHIQ53FT3 197 aa17.79■□□□□ 0.44
PDLIM4-206ENST00000474421 AGKQ53H12 422 aa17.79■□□□□ 0.44
PDLIM4-206ENST00000474421 FAM69AQ5T7M9 428 aa17.79■□□□□ 0.44
PDLIM4-206ENST00000474421 FAM91A1Q658Y4 838 aa17.79■□□□□ 0.44
PDLIM4-206ENST00000474421 MAGEE2Q8TD90 523 aaPredicted RBP17.79■□□□□ 0.44
PDLIM4-206ENST00000474421 KTI12Q96EK9 354 aaPredicted RBP17.79■□□□□ 0.44
PDLIM4-206ENST00000474421 OXGR1Q96P68 337 aa17.79■□□□□ 0.44
PDLIM4-206ENST00000474421 ALKBH3Q96Q83 286 aaPredicted RBP17.79■□□□□ 0.44
PDLIM4-206ENST00000474421 TMEM38AQ9H6F2 299 aa17.79■□□□□ 0.44
PDLIM4-206ENST00000474421 EVA1AQ9H8M9 152 aa17.79■□□□□ 0.44
PDLIM4-206ENST00000474421 VAPAQ9P0L0 249 aa17.79■□□□□ 0.44
PDLIM4-206ENST00000474421 SLAMF8Q9P0V8 285 aa17.79■□□□□ 0.44
PDLIM4-206ENST00000474421 SLC13A4Q9UKG4 626 aa17.79■□□□□ 0.44
PDLIM4-206ENST00000474421 A0A1B0GWA3 101 aa17.78■□□□□ 0.44
PDLIM4-206ENST00000474421 ATP6V1G2-DDX39BF2Z307 99 aa17.78■□□□□ 0.44
PDLIM4-206ENST00000474421 AKAP8O43823 692 aaKnown RBP17.78■□□□□ 0.44
PDLIM4-206ENST00000474421 CD5LO43866 347 aa17.78■□□□□ 0.44
PDLIM4-206ENST00000474421 SERPINB7O75635 380 aa17.78■□□□□ 0.44
PDLIM4-206ENST00000474421 LGI1O95970 557 aa17.78■□□□□ 0.44
PDLIM4-206ENST00000474421 CSF3P09919 207 aa17.78■□□□□ 0.44
PDLIM4-206ENST00000474421 C1DQ13901 141 aaKnown RBP17.78■□□□□ 0.44
PDLIM4-206ENST00000474421 MFSD13AQ14CX5 517 aa17.78■□□□□ 0.44
PDLIM4-206ENST00000474421 C3orf36Q3SXR2 165 aa17.78■□□□□ 0.44
PDLIM4-206ENST00000474421 ALG10BQ5I7T1 473 aa17.78■□□□□ 0.44
PDLIM4-206ENST00000474421 PAGE3Q5JUK9 113 aa17.78■□□□□ 0.44
PDLIM4-206ENST00000474421 ANKRD16Q6P6B7 361 aa17.78■□□□□ 0.44
PDLIM4-206ENST00000474421 ULK3Q6PHR2 472 aa17.78■□□□□ 0.44
PDLIM4-206ENST00000474421 OR10H5Q8NGA6 315 aa17.78■□□□□ 0.44
PDLIM4-206ENST00000474421 BCL2L2Q92843 193 aaPredicted RBP17.78■□□□□ 0.44
PDLIM4-206ENST00000474421 SLC38A2Q96QD8 506 aa17.78■□□□□ 0.44
PDLIM4-206ENST00000474421 SLC52A3Q9NQ40 469 aa17.78■□□□□ 0.44
PDLIM4-206ENST00000474421 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.78■□□□□ 0.44
PDLIM4-206ENST00000474421 TESQ9UGI8 421 aaKnown RBP17.78■□□□□ 0.44
PDLIM4-206ENST00000474421 MOKQ9UQ07 419 aa17.78■□□□□ 0.44
PDLIM4-206ENST00000474421 TRAV36DV7A0A075B6V5 113 aa17.77■□□□□ 0.44
PDLIM4-206ENST00000474421 TRBV5-3A0A0A0MS03 114 aa17.77■□□□□ 0.44
PDLIM4-206ENST00000474421 ARPC4-TTLL3A0A0A6YYG9 625 aa17.77■□□□□ 0.44
PDLIM4-206ENST00000474421 SLC43A1O75387 559 aa17.77■□□□□ 0.44
PDLIM4-206ENST00000474421 GPX2P18283 190 aa17.77■□□□□ 0.44
PDLIM4-206ENST00000474421 CLDN17P56750 224 aa17.77■□□□□ 0.44
PDLIM4-206ENST00000474421 SCARB2Q14108 478 aa17.77■□□□□ 0.44
PDLIM4-206ENST00000474421 H1FNTQ75WM6 255 aaPredicted RBP17.77■□□□□ 0.44
PDLIM4-206ENST00000474421 STON2Q8WXE9 905 aa17.77■□□□□ 0.44
PDLIM4-206ENST00000474421 SLC47A1Q96FL8 570 aa17.77■□□□□ 0.44
PDLIM4-206ENST00000474421 EPYCQ99645 322 aa17.77■□□□□ 0.44
PDLIM4-206ENST00000474421 KATNB1Q9BVA0 655 aa17.77■□□□□ 0.44
PDLIM4-206ENST00000474421 TMEM27Q9HBJ8 222 aa17.77■□□□□ 0.44
PDLIM4-206ENST00000474421 ARFGEF3Q5TH69 2177 aa17.77■□□□□ 0.43
PDLIM4-206ENST00000474421 IGHV4-30-2A0A087WSY4 118 aa17.76■□□□□ 0.43
PDLIM4-206ENST00000474421 IGHV1-18A0A0C4DH31 117 aa17.76■□□□□ 0.43
PDLIM4-206ENST00000474421 LOC102725191A0A1B0GVB3 256 aa17.76■□□□□ 0.43
PDLIM4-206ENST00000474421 RPL36A-HNRNPH2H7BZ11 118 aa17.76■□□□□ 0.43
PDLIM4-206ENST00000474421 UPK3AO75631 287 aa17.76■□□□□ 0.43
PDLIM4-206ENST00000474421 ZNF432O94892 652 aa17.76■□□□□ 0.43
PDLIM4-206ENST00000474421 CRYAAP02489 173 aa17.76■□□□□ 0.43
PDLIM4-206ENST00000474421 SLC25A16P16260 332 aa17.76■□□□□ 0.43
PDLIM4-206ENST00000474421 HTR2AP28223 471 aa17.76■□□□□ 0.43
PDLIM4-206ENST00000474421 EFNA4P52798 201 aa17.76■□□□□ 0.43
PDLIM4-206ENST00000474421 ROR2Q01974 943 aaKnown RBP17.76■□□□□ 0.43
PDLIM4-206ENST00000474421 LGALS3BPQ08380 585 aa17.76■□□□□ 0.43
PDLIM4-206ENST00000474421 KDM8Q8N371 416 aa17.76■□□□□ 0.43
PDLIM4-206ENST00000474421 GPR137CQ8N3F9 429 aa17.76■□□□□ 0.43
PDLIM4-206ENST00000474421 FAM169BQ8N8A8 192 aa17.76■□□□□ 0.43
PDLIM4-206ENST00000474421 ADPRHL1Q8NDY3 354 aa17.76■□□□□ 0.43
PDLIM4-206ENST00000474421 HIPK4Q8NE63 616 aa17.76■□□□□ 0.43
PDLIM4-206ENST00000474421 OR6S1Q8NH40 331 aa17.76■□□□□ 0.43
PDLIM4-206ENST00000474421 TAAR8Q969N4 342 aa17.76■□□□□ 0.43
PDLIM4-206ENST00000474421 INTS9Q9NV88 658 aaKnown RBP17.76■□□□□ 0.43
PDLIM4-206ENST00000474421 ANGPT4Q9Y264 503 aa17.76■□□□□ 0.43
PDLIM4-206ENST00000474421 CORINQ9Y5Q5 1042 aa17.76■□□□□ 0.43
PDLIM4-206ENST00000474421 ANK3Q12955 4377 aaKnown RBP17.76■□□□□ 0.43
PDLIM4-206ENST00000474421 KIAA1324LA8MWY0 1029 aaPredicted RBP17.75■□□□□ 0.43
PDLIM4-206ENST00000474421 M0R082 166 aa17.75■□□□□ 0.43
PDLIM4-206ENST00000474421 GRPRP30550 384 aa17.75■□□□□ 0.43
PDLIM4-206ENST00000474421 RGS8P57771 180 aaPredicted RBP17.75■□□□□ 0.43
PDLIM4-206ENST00000474421 TTMPQ5BVD1 217 aa17.75■□□□□ 0.43
PDLIM4-206ENST00000474421 LINGO2Q7L985 606 aa17.75■□□□□ 0.43
PDLIM4-206ENST00000474421 RANBP3LQ86VV4 465 aaPredicted RBP17.75■□□□□ 0.43
PDLIM4-206ENST00000474421 ARMC8Q8IUR7 673 aa17.75■□□□□ 0.43
PDLIM4-206ENST00000474421 C10orf111Q8N326 155 aa17.75■□□□□ 0.43
PDLIM4-206ENST00000474421 PIK3C3Q8NEB9 887 aa17.75■□□□□ 0.43
PDLIM4-206ENST00000474421 ZNF417Q8TAU3 575 aa17.75■□□□□ 0.43
PDLIM4-206ENST00000474421 FAM168AQ92567 244 aa17.75■□□□□ 0.43
PDLIM4-206ENST00000474421 ZNF587Q96SQ5 575 aaPredicted RBP17.75■□□□□ 0.43
PDLIM4-206ENST00000474421 KLHL14Q9P2G3 628 aa17.75■□□□□ 0.43
PDLIM4-206ENST00000474421 B3GAT1Q9P2W7 334 aa17.75■□□□□ 0.43
PDLIM4-206ENST00000474421 CRNNQ9UBG3 495 aaPredicted RBP17.75■□□□□ 0.43
PDLIM4-206ENST00000474421 LEF1Q9UJU2 399 aaPredicted RBP17.75■□□□□ 0.43
PDLIM4-206ENST00000474421 A0A087WUJ7 227 aa17.74■□□□□ 0.43
PDLIM4-206ENST00000474421 HMGB1P1B2RPK0 211 aaPredicted RBP17.74■□□□□ 0.43
PDLIM4-206ENST00000474421 TPST1O60507 370 aa17.74■□□□□ 0.43
PDLIM4-206ENST00000474421 SNRPD2P62316 118 aaKnown RBP17.74■□□□□ 0.43
PDLIM4-206ENST00000474421 IL1RL1Q01638 556 aa17.74■□□□□ 0.43
PDLIM4-206ENST00000474421 LOXL1Q08397 574 aaPredicted RBP17.74■□□□□ 0.43
PDLIM4-206ENST00000474421 SWT1Q5T5J6 900 aaKnown RBP17.74■□□□□ 0.43
PDLIM4-206ENST00000474421 DLEU7Q6UYE1 221 aa17.74■□□□□ 0.43
PDLIM4-206ENST00000474421 CCDC36Q8IYA8 594 aa17.74■□□□□ 0.43
PDLIM4-206ENST00000474421 ZNF525Q8N782 197 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms