RNA–Protein interactions for RNA: ENST00000474042.5

COPS7B-219, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-219ENST00000474042 HOXB1P14653 301 aaPredicted RBP11.62□□□□□ -0.55
COPS7B-219ENST00000474042 IDO1P14902 403 aa11.62□□□□□ -0.55
COPS7B-219ENST00000474042 ZNF23P17027 643 aa11.62□□□□□ -0.55
COPS7B-219ENST00000474042 ROR2Q01974 943 aaKnown RBP11.62□□□□□ -0.55
COPS7B-219ENST00000474042 EGR4Q05215 589 aa11.62□□□□□ -0.55
COPS7B-219ENST00000474042 FAM120AOSQ5T036 256 aa11.62□□□□□ -0.55
COPS7B-219ENST00000474042 IL17RELQ6ZVW7 336 aa11.62□□□□□ -0.55
COPS7B-219ENST00000474042 OR4F15Q8NGB8 312 aa11.62□□□□□ -0.55
COPS7B-219ENST00000474042 SLC35B4Q969S0 331 aa11.62□□□□□ -0.55
COPS7B-219ENST00000474042 VPS33AQ96AX1 596 aa11.62□□□□□ -0.55
COPS7B-219ENST00000474042 FOXN4Q96NZ1 517 aa11.62□□□□□ -0.55
COPS7B-219ENST00000474042 C19orf24Q9BVV8 132 aa11.62□□□□□ -0.55
COPS7B-219ENST00000474042 BPESC1Q9GZL8 116 aa11.62□□□□□ -0.55
COPS7B-219ENST00000474042 CHODLQ9H9P2 273 aa11.62□□□□□ -0.55
COPS7B-219ENST00000474042 TPT1P8Q9HAU6 139 aa11.62□□□□□ -0.55
COPS7B-219ENST00000474042 B3GAT1Q9P2W7 334 aa11.62□□□□□ -0.55
COPS7B-219ENST00000474042 A0A096LPE4 126 aa11.61□□□□□ -0.55
COPS7B-219ENST00000474042 A0A0G2JPF8 293 aa11.61□□□□□ -0.55
COPS7B-219ENST00000474042 A0A1W2PPZ6 126 aa11.61□□□□□ -0.55
COPS7B-219ENST00000474042 TRPC5OSA6NMA1 111 aa11.61□□□□□ -0.55
COPS7B-219ENST00000474042 HNRNPCL2B2RXH8 293 aa11.61□□□□□ -0.55
COPS7B-219ENST00000474042 HNRNPCL3B7ZW38 293 aa11.61□□□□□ -0.55
COPS7B-219ENST00000474042 HNRNPCL1O60812 293 aaKnown RBP11.61□□□□□ -0.55
COPS7B-219ENST00000474042 SLC22A3O75751 556 aa11.61□□□□□ -0.55
COPS7B-219ENST00000474042 CELA3BP08861 270 aa11.61□□□□□ -0.55
COPS7B-219ENST00000474042 HNRNPCL4P0DMR1 293 aa11.61□□□□□ -0.55
COPS7B-219ENST00000474042 HOXB9P17482 250 aaPredicted RBP11.61□□□□□ -0.55
COPS7B-219ENST00000474042 NCF2P19878 526 aaPredicted RBP11.61□□□□□ -0.55
COPS7B-219ENST00000474042 GIFP27352 417 aa11.61□□□□□ -0.55
COPS7B-219ENST00000474042 CRATP43155 626 aa11.61□□□□□ -0.55
COPS7B-219ENST00000474042 IDH3GP51553 393 aaPredicted RBP11.61□□□□□ -0.55
COPS7B-219ENST00000474042 WDR4P57081 412 aaKnown RBP11.61□□□□□ -0.55
COPS7B-219ENST00000474042 HGFACQ04756 655 aa11.61□□□□□ -0.55
COPS7B-219ENST00000474042 VRK1Q99986 396 aaPredicted RBP11.61□□□□□ -0.55
COPS7B-219ENST00000474042 SOX7Q9BT81 388 aa11.61□□□□□ -0.55
COPS7B-219ENST00000474042 BCL2L10Q9HD36 194 aa11.61□□□□□ -0.55
COPS7B-219ENST00000474042 KCNK9Q9NPC2 374 aa11.61□□□□□ -0.55
COPS7B-219ENST00000474042 SDR39U1Q9NRG7 319 aaPredicted RBP11.61□□□□□ -0.55
COPS7B-219ENST00000474042 THAP1Q9NVV9 213 aa11.61□□□□□ -0.55
COPS7B-219ENST00000474042 THUMPD1Q9NXG2 353 aaKnown RBP11.61□□□□□ -0.55
COPS7B-219ENST00000474042 ZIM2Q9NZV7 527 aa11.61□□□□□ -0.55
COPS7B-219ENST00000474042 SEC14L4Q9UDX3 406 aa11.61□□□□□ -0.55
COPS7B-219ENST00000474042 FBXO9Q9UK97 447 aaPredicted RBP11.61□□□□□ -0.55
COPS7B-219ENST00000474042 IFT52Q9Y366 437 aa11.61□□□□□ -0.55
COPS7B-219ENST00000474042 IGHV2OR16-5A0A0B4J2B6 119 aa11.6□□□□□ -0.55
COPS7B-219ENST00000474042 ZNF503-AS2A6NEH8 195 aa11.6□□□□□ -0.55
COPS7B-219ENST00000474042 STAMBPO95630 424 aa11.6□□□□□ -0.55
COPS7B-219ENST00000474042 IGFBP1P08833 259 aaPredicted RBP11.6□□□□□ -0.55
COPS7B-219ENST00000474042 TACSTD2P09758 323 aa11.6□□□□□ -0.55
COPS7B-219ENST00000474042 BMP2P12643 396 aa11.6□□□□□ -0.55
COPS7B-219ENST00000474042 CBR1P16152 277 aa11.6□□□□□ -0.55
COPS7B-219ENST00000474042 HNF1AP20823 631 aa11.6□□□□□ -0.55
COPS7B-219ENST00000474042 RPS5P46782 204 aaKnown RBP11.6□□□□□ -0.55
COPS7B-219ENST00000474042 CLDN17P56750 224 aa11.6□□□□□ -0.55
COPS7B-219ENST00000474042 ARF1P84077 181 aaKnown RBP11.6□□□□□ -0.55
COPS7B-219ENST00000474042 CARTPTQ16568 116 aa11.6□□□□□ -0.55
COPS7B-219ENST00000474042 CEP85LQ5SZL2 805 aa11.6□□□□□ -0.55
COPS7B-219ENST00000474042 VHLLQ6RSH7 139 aa11.6□□□□□ -0.55
COPS7B-219ENST00000474042 MAVSQ7Z434 540 aa11.6□□□□□ -0.55
COPS7B-219ENST00000474042 TMEM123Q8N131 208 aa11.6□□□□□ -0.55
COPS7B-219ENST00000474042 KDM8Q8N371 416 aa11.6□□□□□ -0.55
COPS7B-219ENST00000474042 ANKRD42Q8N9B4 389 aa11.6□□□□□ -0.55
COPS7B-219ENST00000474042 ZNF540Q8NDQ6 660 aa11.6□□□□□ -0.55
COPS7B-219ENST00000474042 KTI12Q96EK9 354 aaPredicted RBP11.6□□□□□ -0.55
COPS7B-219ENST00000474042 ITCHQ96J02 903 aa11.6□□□□□ -0.55
COPS7B-219ENST00000474042 PAIP2Q9BPZ3 127 aaKnown RBP11.6□□□□□ -0.55
COPS7B-219ENST00000474042 ARMC7Q9H6L4 198 aa11.6□□□□□ -0.55
COPS7B-219ENST00000474042 RMND5AQ9H871 391 aa11.6□□□□□ -0.55
COPS7B-219ENST00000474042 C12orf10Q9HB07 376 aa11.6□□□□□ -0.55
COPS7B-219ENST00000474042 GPR35Q9HC97 309 aa11.6□□□□□ -0.55
COPS7B-219ENST00000474042 A4GALTQ9NPC4 353 aa11.6□□□□□ -0.55
COPS7B-219ENST00000474042 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.6□□□□□ -0.55
COPS7B-219ENST00000474042 ZNF232Q9UNY5 417 aa11.6□□□□□ -0.55
COPS7B-219ENST00000474042 V9GYY5 206 aaPredicted RBP11.6□□□□□ -0.55
COPS7B-219ENST00000474042 IGKV1D-42A0A075B6H8 117 aa11.59□□□□□ -0.55
COPS7B-219ENST00000474042 TMEM129A0AVI4 362 aa11.59□□□□□ -0.55
COPS7B-219ENST00000474042 SLCO1B7G3V0H7 640 aa11.59□□□□□ -0.55
COPS7B-219ENST00000474042 hCG_2039718K7EN88 272 aa11.59□□□□□ -0.55
COPS7B-219ENST00000474042 AIM2O14862 343 aa11.59□□□□□ -0.55
COPS7B-219ENST00000474042 TRAF3IP2O43734 574 aaPredicted RBP11.59□□□□□ -0.55
COPS7B-219ENST00000474042 SLC43A1O75387 559 aa11.59□□□□□ -0.55
COPS7B-219ENST00000474042 ANP32DO95626 131 aa11.59□□□□□ -0.55
COPS7B-219ENST00000474042 NUDT7P0C024 238 aa11.59□□□□□ -0.55
COPS7B-219ENST00000474042 KITP10721 976 aa11.59□□□□□ -0.55
COPS7B-219ENST00000474042 ZNF43P17038 809 aa11.59□□□□□ -0.55
COPS7B-219ENST00000474042 THBS4P35443 961 aa11.59□□□□□ -0.55
COPS7B-219ENST00000474042 HOXC5Q00444 222 aa11.59□□□□□ -0.55
COPS7B-219ENST00000474042 SRSF2Q01130 221 aaKnown RBP11.59□□□□□ -0.55
COPS7B-219ENST00000474042 IQCCQ4KMZ1 466 aa11.59□□□□□ -0.55
COPS7B-219ENST00000474042 SLC9B1Q4ZJI4 515 aa11.59□□□□□ -0.55
COPS7B-219ENST00000474042 ZNF311Q5JNZ3 666 aa11.59□□□□□ -0.55
COPS7B-219ENST00000474042 FAM69AQ5T7M9 428 aa11.59□□□□□ -0.55
COPS7B-219ENST00000474042 HHATQ5VTY9 493 aa11.59□□□□□ -0.55
COPS7B-219ENST00000474042 ATG16L1Q676U5 607 aa11.59□□□□□ -0.55
COPS7B-219ENST00000474042 NXNQ6DKJ4 435 aa11.59□□□□□ -0.55
COPS7B-219ENST00000474042 ADPRHL1Q8NDY3 354 aa11.59□□□□□ -0.55
COPS7B-219ENST00000474042 OR9I1Q8NGQ6 314 aa11.59□□□□□ -0.55
COPS7B-219ENST00000474042 BBS10Q8TAM1 723 aa11.59□□□□□ -0.55
COPS7B-219ENST00000474042 SLC25A36Q96CQ1 311 aa11.59□□□□□ -0.55
COPS7B-219ENST00000474042 ZNF837Q96EG3 531 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms