RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 PARPBPQ9NWS1 579 aa16.68■□□□□ 0.26
PTCD3-210ENST00000473829 ST6GALNAC2Q9UJ37 374 aa16.68■□□□□ 0.26
PTCD3-210ENST00000473829 ITGB1BP2Q9UKP3 347 aa16.68■□□□□ 0.26
PTCD3-210ENST00000473829 B3GALT5Q9Y2C3 310 aa16.68■□□□□ 0.26
PTCD3-210ENST00000473829 PLEKHA6Q9Y2H5 1048 aa16.68■□□□□ 0.26
PTCD3-210ENST00000473829 MS4A18H0YCH9 400 aa16.67■□□□□ 0.26
PTCD3-210ENST00000473829 KPNA4O00629 521 aaPredicted RBP16.67■□□□□ 0.26
PTCD3-210ENST00000473829 GSTA4O15217 222 aa16.67■□□□□ 0.26
PTCD3-210ENST00000473829 TRAF3IP2O43734 574 aaPredicted RBP16.67■□□□□ 0.26
PTCD3-210ENST00000473829 SERPINA1P01009 418 aa16.67■□□□□ 0.26
PTCD3-210ENST00000473829 GGT1P19440 569 aa16.67■□□□□ 0.26
PTCD3-210ENST00000473829 CLDN17P56750 224 aa16.67■□□□□ 0.26
PTCD3-210ENST00000473829 SLC25A3Q00325 362 aa16.67■□□□□ 0.26
PTCD3-210ENST00000473829 STK11Q15831 433 aa16.67■□□□□ 0.26
PTCD3-210ENST00000473829 MS4A18Q3C1V0 323 aa16.67■□□□□ 0.26
PTCD3-210ENST00000473829 BEX5Q5H9J7 111 aa16.67■□□□□ 0.26
PTCD3-210ENST00000473829 NIPAL3Q6P499 406 aa16.67■□□□□ 0.26
PTCD3-210ENST00000473829 TTC33Q6PID6 262 aaPredicted RBP16.67■□□□□ 0.26
PTCD3-210ENST00000473829 PAMR1Q6UXH9 720 aa16.67■□□□□ 0.26
PTCD3-210ENST00000473829 CBLL1Q75N03 491 aa16.67■□□□□ 0.26
PTCD3-210ENST00000473829 C10orf53Q8N6V4 93 aa16.67■□□□□ 0.26
PTCD3-210ENST00000473829 FAM156AQ8NDB6 213 aa16.67■□□□□ 0.26
PTCD3-210ENST00000473829 RBM15BQ8NDT2 890 aaKnown RBP16.67■□□□□ 0.26
PTCD3-210ENST00000473829 ADPRHL1Q8NDY3 354 aa16.67■□□□□ 0.26
PTCD3-210ENST00000473829 MPP4Q96JB8 637 aa16.67■□□□□ 0.26
PTCD3-210ENST00000473829 OXGR1Q96P68 337 aa16.67■□□□□ 0.26
PTCD3-210ENST00000473829 MEPEQ9NQ76 525 aaPredicted RBP16.67■□□□□ 0.26
PTCD3-210ENST00000473829 TAS2R16Q9NYV7 291 aa16.67■□□□□ 0.26
PTCD3-210ENST00000473829 ADA2Q9NZK5 511 aa16.67■□□□□ 0.26
PTCD3-210ENST00000473829 EGFL7Q9UHF1 273 aa16.67■□□□□ 0.26
PTCD3-210ENST00000473829 SNX13Q9Y5W8 968 aa16.67■□□□□ 0.26
PTCD3-210ENST00000473829 NDUFAB1O14561 156 aa16.66■□□□□ 0.26
PTCD3-210ENST00000473829 OR5F1O95221 314 aa16.66■□□□□ 0.26
PTCD3-210ENST00000473829 ZNF682O95780 498 aa16.66■□□□□ 0.26
PTCD3-210ENST00000473829 HLA-DOBP13765 273 aa16.66■□□□□ 0.26
PTCD3-210ENST00000473829 NQO1P15559 274 aaKnown RBP16.66■□□□□ 0.26
PTCD3-210ENST00000473829 ZNF43P17038 809 aa16.66■□□□□ 0.26
PTCD3-210ENST00000473829 IST1P53990 364 aa16.66■□□□□ 0.26
PTCD3-210ENST00000473829 UGT2B15P54855 530 aa16.66■□□□□ 0.26
PTCD3-210ENST00000473829 TAS2R41P59536 307 aa16.66■□□□□ 0.26
PTCD3-210ENST00000473829 MFSD13AQ14CX5 517 aa16.66■□□□□ 0.26
PTCD3-210ENST00000473829 ZNF74Q16587 644 aa16.66■□□□□ 0.26
PTCD3-210ENST00000473829 GKAP1Q5VSY0 366 aaPredicted RBP16.66■□□□□ 0.26
PTCD3-210ENST00000473829 LINGO2Q7L985 606 aa16.66■□□□□ 0.26
PTCD3-210ENST00000473829 WDFY1Q8IWB7 410 aa16.66■□□□□ 0.26
PTCD3-210ENST00000473829 SCAIQ8N9R8 606 aa16.66■□□□□ 0.26
PTCD3-210ENST00000473829 TMEM255BQ8WV15 326 aa16.66■□□□□ 0.26
PTCD3-210ENST00000473829 HSD17B8Q92506 261 aa16.66■□□□□ 0.26
PTCD3-210ENST00000473829 PLPPR2Q96GM1 343 aa16.66■□□□□ 0.26
PTCD3-210ENST00000473829 ASPNQ9BXN1 380 aa16.66■□□□□ 0.26
PTCD3-210ENST00000473829 AMBRA1Q9C0C7 1298 aa16.66■□□□□ 0.26
PTCD3-210ENST00000473829 MRPL39Q9NYK5 338 aaKnown RBP16.66■□□□□ 0.26
PTCD3-210ENST00000473829 UPB1Q9UBR1 384 aa16.66■□□□□ 0.26
PTCD3-210ENST00000473829 RIMS3Q9UJD0 308 aa16.66■□□□□ 0.26
PTCD3-210ENST00000473829 A4GNTQ9UNA3 340 aa16.66■□□□□ 0.26
PTCD3-210ENST00000473829 CORINQ9Y5Q5 1042 aa16.66■□□□□ 0.26
PTCD3-210ENST00000473829 CELSR1Q9NYQ6 3014 aa16.66■□□□□ 0.26
PTCD3-210ENST00000473829 OR5H1A6NKK0 313 aa16.65■□□□□ 0.26
PTCD3-210ENST00000473829 J3KTA2 159 aa16.65■□□□□ 0.26
PTCD3-210ENST00000473829 UPK3AO75631 287 aa16.65■□□□□ 0.26
PTCD3-210ENST00000473829 ZNF432O94892 652 aa16.65■□□□□ 0.26
PTCD3-210ENST00000473829 CH25HO95992 272 aa16.65■□□□□ 0.26
PTCD3-210ENST00000473829 PLAUP00749 431 aa16.65■□□□□ 0.26
PTCD3-210ENST00000473829 IL1RL1Q01638 556 aa16.65■□□□□ 0.26
PTCD3-210ENST00000473829 FOXD4Q12950 439 aaPredicted RBP16.65■□□□□ 0.26
PTCD3-210ENST00000473829 PMS2P3Q13401 168 aa16.65■□□□□ 0.26
PTCD3-210ENST00000473829 GABRA6Q16445 453 aa16.65■□□□□ 0.26
PTCD3-210ENST00000473829 NHLRC1Q6VVB1 395 aa16.65■□□□□ 0.26
PTCD3-210ENST00000473829 SLC46A3Q7Z3Q1 461 aa16.65■□□□□ 0.26
PTCD3-210ENST00000473829 PGAM4Q8N0Y7 254 aa16.65■□□□□ 0.26
PTCD3-210ENST00000473829 LRRC17Q8N6Y2 441 aa16.65■□□□□ 0.26
PTCD3-210ENST00000473829 POMGNT2Q8NAT1 580 aa16.65■□□□□ 0.26
PTCD3-210ENST00000473829 PFN4Q8NHR9 129 aa16.65■□□□□ 0.26
PTCD3-210ENST00000473829 LZICQ8WZA0 190 aa16.65■□□□□ 0.26
PTCD3-210ENST00000473829 FAM162AQ96A26 154 aa16.65■□□□□ 0.26
PTCD3-210ENST00000473829 HSH2DQ96JZ2 352 aa16.65■□□□□ 0.26
PTCD3-210ENST00000473829 ALKBH3Q96Q83 286 aaPredicted RBP16.65■□□□□ 0.26
PTCD3-210ENST00000473829 POLR2J2Q9GZM3 115 aaKnown RBP16.65■□□□□ 0.26
PTCD3-210ENST00000473829 POLR2J3Q9H1A7 115 aaKnown RBP16.65■□□□□ 0.26
PTCD3-210ENST00000473829 CCM2LQ9NUG4 571 aaPredicted RBP16.65■□□□□ 0.26
PTCD3-210ENST00000473829 NPAP1Q9NZP6 1156 aa16.65■□□□□ 0.26
PTCD3-210ENST00000473829 ADAM21Q9UKJ8 722 aa16.65■□□□□ 0.26
PTCD3-210ENST00000473829 LOC102725191A0A1B0GVB3 256 aa16.64■□□□□ 0.25
PTCD3-210ENST00000473829 A0A1W2PR80 420 aa16.64■□□□□ 0.25
PTCD3-210ENST00000473829 CIB4A0PJX0 185 aa16.64■□□□□ 0.25
PTCD3-210ENST00000473829 PLPP3O14495 311 aa16.64■□□□□ 0.25
PTCD3-210ENST00000473829 ATE1O95260 518 aa16.64■□□□□ 0.25
PTCD3-210ENST00000473829 MT-ATP6P00846 226 aa16.64■□□□□ 0.25
PTCD3-210ENST00000473829 YAP1P46937 504 aaKnown RBP16.64■□□□□ 0.25
PTCD3-210ENST00000473829 C1DQ13901 141 aaKnown RBP16.64■□□□□ 0.25
PTCD3-210ENST00000473829 PPA1Q15181 289 aa16.64■□□□□ 0.25
PTCD3-210ENST00000473829 IFI44LQ53G44 452 aa16.64■□□□□ 0.25
PTCD3-210ENST00000473829 TIMM23BQ5SRD1 257 aa16.64■□□□□ 0.25
PTCD3-210ENST00000473829 TSEN54Q7Z6J9 526 aaKnown RBP16.64■□□□□ 0.25
PTCD3-210ENST00000473829 OR5J2Q8NH18 312 aa16.64■□□□□ 0.25
PTCD3-210ENST00000473829 OR52N5Q8NH56 324 aa16.64■□□□□ 0.25
PTCD3-210ENST00000473829 GEMIN6Q8WXD5 167 aaKnown RBP16.64■□□□□ 0.25
PTCD3-210ENST00000473829 PRRC1Q96M27 445 aa16.64■□□□□ 0.25
PTCD3-210ENST00000473829 USB1Q9BQ65 265 aaKnown RBP16.64■□□□□ 0.25
PTCD3-210ENST00000473829 TMEM204Q9BSN7 226 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms