RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 KLRF1Q9NZS2 232 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 EXTL2Q9UBQ6 330 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 LCMT1Q9UIC8 334 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 CLEC4AQ9UMR7 237 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 FOXJ3Q9UPW0 622 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 MRPS28Q9Y2Q9 187 aaKnown RBP1.97□□□□□ -2.09
CALD1-216ENST00000473714 AUP1Q9Y679 476 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 AP4B1Q9Y6B7 739 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 ANKRD36A6QL64 1941 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 DNAH9Q9NYC9 4486 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 SPTBP11277 2137 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 LOC390937A0A1W2PQ73 354 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 A0A1W2PR80 420 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 CTAGE15A4D2H0 777 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 E9PMD0 336 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 C11orf98E9PRG8 122 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 SGK494L7N484 410 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 CYB561D2O14569 222 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 TFECO14948 347 aaPredicted RBP1.96□□□□□ -2.1
CALD1-216ENST00000473714 RAD51BO15315 384 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 HCRTO43612 131 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 TSPAN2O60636 221 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 SCGNO76038 276 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 PLEKHA8P1O95397 391 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 ADCY5O95622 1261 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 ANGPTL1O95841 491 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 NUDT14O95848 222 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 ALPIP09923 528 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 TRIM49P0CI25 452 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 TRIM49CP0CI26 452 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 PRSS56P0CW18 603 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 HSMCR30P0CW71 290 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 CYP11B1P15538 503 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 GLRA1P23415 457 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 CD1CP29017 333 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 PBLDP30039 288 aaPredicted RBP1.96□□□□□ -2.1
CALD1-216ENST00000473714 YWHABP31946 246 aaKnown RBP1.96□□□□□ -2.1
CALD1-216ENST00000473714 FCGR2CP31995 323 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 OTX2P32243 289 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 MTIF2P46199 727 aaKnown RBP1.96□□□□□ -2.1
CALD1-216ENST00000473714 PGFP49763 221 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 NDST1P52848 882 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 AIF1P55008 147 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 DLX5P56178 289 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 ATP5IP56385 69 aaPredicted RBP1.96□□□□□ -2.1
CALD1-216ENST00000473714 LINC01547P58512 204 aaPredicted RBP1.96□□□□□ -2.1
CALD1-216ENST00000473714 ERVFC1-1P60608 527 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 RPS15P62841 145 aaKnown RBP1.96□□□□□ -2.1
CALD1-216ENST00000473714 GUCY2DQ02846 1103 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 FGL1Q08830 312 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 ARL16Q0P5N6 197 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 PJVKQ0ZLH3 352 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 IL24Q13007 206 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 MRPL28Q13084 256 aaKnown RBP1.96□□□□□ -2.1
CALD1-216ENST00000473714 CHIT1Q13231 466 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 MSLNQ13421 630 aaPredicted RBP1.96□□□□□ -2.1
CALD1-216ENST00000473714 SLC17A1Q14916 467 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 PDK3Q15120 406 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 ELOCQ15369 112 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 ZBTB6Q15916 424 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 HAGHQ16775 308 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 CFAP221Q4G0U5 840 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 RABGAP1LQ5R372 815 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 SEL1L3Q68CR1 1132 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 DMKNQ6E0U4 476 aaPredicted RBP1.96□□□□□ -2.1
CALD1-216ENST00000473714 DOK6Q6PKX4 331 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 FIP1L1Q6UN15 594 aaKnown RBP1.96□□□□□ -2.1
CALD1-216ENST00000473714 CCBE1Q6UXH8 406 aaPredicted RBP1.96□□□□□ -2.1
CALD1-216ENST00000473714 APOOLQ6UXV4 268 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 TAS2R42Q7RTR8 314 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 DPY19L4Q7Z388 723 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 CTAGE6Q86UF2 777 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 SLC22A16Q86VW1 577 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 GKN2Q86XP6 184 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 ZBTB8OSQ8IWT0 167 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 STK40Q8N2I9 435 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 MTURNQ8N3F0 131 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 METTL4Q8N3J2 472 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 SAMD12Q8N8I0 201 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 EIF1ADQ8N9N8 165 aaKnown RBP1.96□□□□□ -2.1
CALD1-216ENST00000473714 NUP37Q8NFH4 326 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 OR52M1Q8NGK5 317 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 GATAD1Q8WUU5 269 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 MAIP1Q8WWC4 291 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 FBXO17Q96EF6 278 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 SDSLQ96GA7 329 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 DHTKD1Q96HY7 919 aaPredicted RBP1.96□□□□□ -2.1
CALD1-216ENST00000473714 PRAC1Q96KF2 57 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 C4orf36Q96KX1 117 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 RPRD1AQ96P16 312 aaPredicted RBP1.96□□□□□ -2.1
CALD1-216ENST00000473714 SIGLEC12Q96PQ1 595 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 ALKBH3Q96Q83 286 aaPredicted RBP1.96□□□□□ -2.1
CALD1-216ENST00000473714 ACCSQ96QU6 501 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 USP28Q96RU2 1077 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 RIT2Q99578 217 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 LYSTQ99698 3801 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 SLC39A3Q9BRY0 314 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 CABLES2Q9BTV7 478 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 ZSCAN5AQ9BUG6 496 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 ALG12Q9BV10 488 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms