RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 EDC4Q6P2E9 1401 aaKnown RBP4.47□□□□□ -1.69
SEC22A-204ENST00000473494 SHANK3Q9BYB0 1731 aa4.47□□□□□ -1.69
SEC22A-204ENST00000473494 IGLV3-10A0A075B6K4 115 aa4.47□□□□□ -1.69
SEC22A-204ENST00000473494 TUBAL3A6NHL2 446 aa4.47□□□□□ -1.69
SEC22A-204ENST00000473494 PCP4L1A6NKN8 68 aa4.47□□□□□ -1.69
SEC22A-204ENST00000473494 SNTNA6NMZ2 147 aa4.47□□□□□ -1.69
SEC22A-204ENST00000473494 FAM25EA8MYX2 175 aa4.47□□□□□ -1.69
SEC22A-204ENST00000473494 K7N7A8 449 aa4.47□□□□□ -1.69
SEC22A-204ENST00000473494 B4GALT2O60909 372 aa4.47□□□□□ -1.69
SEC22A-204ENST00000473494 TSPAN12O95859 305 aa4.47□□□□□ -1.69
SEC22A-204ENST00000473494 AQP1P29972 269 aa4.47□□□□□ -1.69
SEC22A-204ENST00000473494 HTR1FP30939 366 aa4.47□□□□□ -1.69
SEC22A-204ENST00000473494 UGT1A5P35504 534 aa4.47□□□□□ -1.69
SEC22A-204ENST00000473494 OR3A4PP47883 348 aa4.47□□□□□ -1.69
SEC22A-204ENST00000473494 QARSP47897 775 aaKnown RBP4.47□□□□□ -1.69
SEC22A-204ENST00000473494 CCDC173Q0VFZ6 552 aa4.47□□□□□ -1.69
SEC22A-204ENST00000473494 GRB7Q14451 532 aa4.47□□□□□ -1.69
SEC22A-204ENST00000473494 RABL6Q3YEC7 729 aaPredicted RBP4.47□□□□□ -1.69
SEC22A-204ENST00000473494 HSD17B13Q7Z5P4 300 aaPredicted RBP4.47□□□□□ -1.69
SEC22A-204ENST00000473494 ZNF589Q86UQ0 364 aaPredicted RBP4.47□□□□□ -1.69
SEC22A-204ENST00000473494 FBXL16Q8N461 479 aa4.47□□□□□ -1.69
SEC22A-204ENST00000473494 OR10H4Q8NGA5 316 aa4.47□□□□□ -1.69
SEC22A-204ENST00000473494 OR9A1PQ8NGU1 263 aa4.47□□□□□ -1.69
SEC22A-204ENST00000473494 NEIL2Q969S2 332 aa4.47□□□□□ -1.69
SEC22A-204ENST00000473494 NT5C3BQ969T7 300 aa4.47□□□□□ -1.69
SEC22A-204ENST00000473494 GON7Q9BXV9 100 aa4.47□□□□□ -1.69
SEC22A-204ENST00000473494 YY1AP1Q9H869 796 aa4.47□□□□□ -1.69
SEC22A-204ENST00000473494 SGK2Q9HBY8 427 aa4.47□□□□□ -1.69
SEC22A-204ENST00000473494 MCCC2Q9HCC0 563 aa4.47□□□□□ -1.69
SEC22A-204ENST00000473494 PRPF19Q9UMS4 504 aaKnown RBP4.47□□□□□ -1.69
SEC22A-204ENST00000473494 COPS3Q9UNS2 423 aa4.47□□□□□ -1.69
SEC22A-204ENST00000473494 ANKRD36BQ8N2N9 1353 aa4.47□□□□□ -1.69
SEC22A-204ENST00000473494 MAP3K19Q56UN5 1328 aa4.46□□□□□ -1.69
SEC22A-204ENST00000473494 DISP2A7MBM2 1401 aa4.46□□□□□ -1.69
SEC22A-204ENST00000473494 CRB1P82279 1406 aa4.46□□□□□ -1.69
SEC22A-204ENST00000473494 NSD3Q9BZ95 1437 aa4.46□□□□□ -1.69
SEC22A-204ENST00000473494 MAP2P11137 1827 aaKnown RBP4.46□□□□□ -1.69
SEC22A-204ENST00000473494 SRCAPQ6ZRS2 3230 aa4.46□□□□□ -1.69
SEC22A-204ENST00000473494 BRD4O60885 1362 aaPredicted RBP4.46□□□□□ -1.7
SEC22A-204ENST00000473494 A0A1B0GUS0 222 aa4.46□□□□□ -1.7
SEC22A-204ENST00000473494 IDSB3KWA1 339 aa4.46□□□□□ -1.7
SEC22A-204ENST00000473494 CASQ2O14958 399 aaPredicted RBP4.46□□□□□ -1.7
SEC22A-204ENST00000473494 POLR2DO15514 142 aaKnown RBP4.46□□□□□ -1.7
SEC22A-204ENST00000473494 FCMRO60667 390 aa4.46□□□□□ -1.7
SEC22A-204ENST00000473494 CLDN9O95484 217 aa4.46□□□□□ -1.7
SEC22A-204ENST00000473494 PSMB1P20618 241 aaKnown RBP4.46□□□□□ -1.7
SEC22A-204ENST00000473494 MAGEA8P43361 318 aa4.46□□□□□ -1.7
SEC22A-204ENST00000473494 DIO3P55073 304 aa4.46□□□□□ -1.7
SEC22A-204ENST00000473494 ZNF45Q02386 682 aa4.46□□□□□ -1.7
SEC22A-204ENST00000473494 DDX39BQ13838 428 aaKnown RBP4.46□□□□□ -1.7
SEC22A-204ENST00000473494 KLF17Q5JT82 389 aaPredicted RBP4.46□□□□□ -1.7
SEC22A-204ENST00000473494 RSBN1Q5VWQ0 802 aaPredicted RBP4.46□□□□□ -1.7
SEC22A-204ENST00000473494 UNQ9370/PRO34162Q6UXP9 181 aa4.46□□□□□ -1.7
SEC22A-204ENST00000473494 ARCQ7LC44 396 aa4.46□□□□□ -1.7
SEC22A-204ENST00000473494 FAM83FQ8NEG4 500 aaPredicted RBP4.46□□□□□ -1.7
SEC22A-204ENST00000473494 BBS1Q8NFJ9 593 aa4.46□□□□□ -1.7
SEC22A-204ENST00000473494 ZNF564Q8TBZ8 553 aaPredicted RBP4.46□□□□□ -1.7
SEC22A-204ENST00000473494 GIMAP1Q8WWP7 306 aa4.46□□□□□ -1.7
SEC22A-204ENST00000473494 RAPGEF5Q92565 580 aa4.46□□□□□ -1.7
SEC22A-204ENST00000473494 RBM14Q96PK6 669 aaKnown RBP4.46□□□□□ -1.7
SEC22A-204ENST00000473494 COPS8Q99627 209 aa4.46□□□□□ -1.7
SEC22A-204ENST00000473494 SLC39A3Q9BRY0 314 aa4.46□□□□□ -1.7
SEC22A-204ENST00000473494 KIF25-AS1Q9Y6Z4 181 aa4.46□□□□□ -1.7
SEC22A-204ENST00000473494 ADAMTS9Q9P2N4 1935 aa4.46□□□□□ -1.7
SEC22A-204ENST00000473494 RGPD1P0DJD0 1748 aa4.46□□□□□ -1.7
SEC22A-204ENST00000473494 BLMP54132 1417 aaPredicted RBP4.46□□□□□ -1.7
SEC22A-204ENST00000473494 TDRD6O60522 2096 aaKnown RBP4.45□□□□□ -1.7
SEC22A-204ENST00000473494 ZNF646O15015 1829 aaPredicted RBP4.45□□□□□ -1.7
SEC22A-204ENST00000473494 ERICH4A6NGS2 130 aa4.45□□□□□ -1.7
SEC22A-204ENST00000473494 RGS16O15492 202 aaPredicted RBP4.45□□□□□ -1.7
SEC22A-204ENST00000473494 TIMM8AO60220 97 aaPredicted RBP4.45□□□□□ -1.7
SEC22A-204ENST00000473494 PFKFB2O60825 505 aa4.45□□□□□ -1.7
SEC22A-204ENST00000473494 IGKV3-15P01624 115 aa4.45□□□□□ -1.7
SEC22A-204ENST00000473494 NPR2P20594 1047 aa4.45□□□□□ -1.7
SEC22A-204ENST00000473494 BTDP43251 543 aa4.45□□□□□ -1.7
SEC22A-204ENST00000473494 BIDP55957 195 aa4.45□□□□□ -1.7
SEC22A-204ENST00000473494 RPL23AP62750 156 aaKnown RBP4.45□□□□□ -1.7
SEC22A-204ENST00000473494 ASPHQ12797 758 aa4.45□□□□□ -1.7
SEC22A-204ENST00000473494 ARL6IP1Q15041 203 aa4.45□□□□□ -1.7
SEC22A-204ENST00000473494 EOGTQ5NDL2 527 aa4.45□□□□□ -1.7
SEC22A-204ENST00000473494 PHYHD1Q5SRE7 291 aa4.45□□□□□ -1.7
SEC22A-204ENST00000473494 ATL3Q6DD88 541 aa4.45□□□□□ -1.7
SEC22A-204ENST00000473494 DHDDSQ86SQ9 333 aa4.45□□□□□ -1.7
SEC22A-204ENST00000473494 SCFD1Q8WVM8 642 aa4.45□□□□□ -1.7
SEC22A-204ENST00000473494 MAIP1Q8WWC4 291 aa4.45□□□□□ -1.7
SEC22A-204ENST00000473494 CHCHD10Q8WYQ3 142 aaPredicted RBP4.45□□□□□ -1.7
SEC22A-204ENST00000473494 GAL3ST1Q99999 423 aa4.45□□□□□ -1.7
SEC22A-204ENST00000473494 GCOM2Q9BZD3 368 aaPredicted RBP4.45□□□□□ -1.7
SEC22A-204ENST00000473494 NMUR2Q9GZQ4 415 aa4.45□□□□□ -1.7
SEC22A-204ENST00000473494 PTGES2Q9H7Z7 377 aa4.45□□□□□ -1.7
SEC22A-204ENST00000473494 ISG20L2Q9H9L3 353 aaKnown RBP4.45□□□□□ -1.7
SEC22A-204ENST00000473494 NUP188Q5SRE5 1749 aa4.45□□□□□ -1.7
SEC22A-204ENST00000473494 MEGF6O75095 1541 aa4.45□□□□□ -1.7
SEC22A-204ENST00000473494 RREB1Q92766 1687 aa4.45□□□□□ -1.7
SEC22A-204ENST00000473494 ANKRD26Q9UPS8 1709 aa4.44□□□□□ -1.7
SEC22A-204ENST00000473494 RPAP1Q9BWH6 1393 aaPredicted RBP4.44□□□□□ -1.7
SEC22A-204ENST00000473494 A0A0U1RQS6 177 aa4.44□□□□□ -1.7
SEC22A-204ENST00000473494 E7ENQ6 273 aa4.44□□□□□ -1.7
SEC22A-204ENST00000473494 PES1O00541 588 aaKnown RBP4.44□□□□□ -1.7
SEC22A-204ENST00000473494 ZNF264O43296 627 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms