RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 PRKACBP22694 351 aa2.2□□□□□ -2.06
XRN1-210ENST00000472697 AADACP22760 399 aa2.2□□□□□ -2.06
XRN1-210ENST00000472697 HOXD3P31249 432 aaPredicted RBP2.2□□□□□ -2.06
XRN1-210ENST00000472697 SLC1A4P43007 532 aa2.2□□□□□ -2.06
XRN1-210ENST00000472697 TMED10P49755 219 aaKnown RBP2.2□□□□□ -2.06
XRN1-210ENST00000472697 RAB9AP51151 201 aa2.2□□□□□ -2.06
XRN1-210ENST00000472697 HMGCS2P54868 508 aa2.2□□□□□ -2.06
XRN1-210ENST00000472697 EEF1A1P68104 462 aaKnown RBP2.2□□□□□ -2.06
XRN1-210ENST00000472697 SSBP2P81877 361 aaPredicted RBP2.2□□□□□ -2.06
XRN1-210ENST00000472697 CD300CQ08708 224 aa2.2□□□□□ -2.06
XRN1-210ENST00000472697 ILF3Q12906 894 aaKnown RBP eCLIP2.2□□□□□ -2.06
XRN1-210ENST00000472697 SLC10A2Q12908 348 aaPredicted RBP2.2□□□□□ -2.06
XRN1-210ENST00000472697 ECSCRQ19T08 205 aa2.2□□□□□ -2.06
XRN1-210ENST00000472697 PPM1LQ5SGD2 360 aa2.2□□□□□ -2.06
XRN1-210ENST00000472697 EEF1A1P5Q5VTE0 462 aa2.2□□□□□ -2.06
XRN1-210ENST00000472697 ZNF470Q6ECI4 717 aa2.2□□□□□ -2.06
XRN1-210ENST00000472697 FAM53AQ6NSI3 398 aaPredicted RBP2.2□□□□□ -2.06
XRN1-210ENST00000472697 CRIP3Q6Q6R5 217 aa2.2□□□□□ -2.06
XRN1-210ENST00000472697 PGAP1Q75T13 922 aa2.2□□□□□ -2.06
XRN1-210ENST00000472697 C1QL2Q7Z5L3 287 aa2.2□□□□□ -2.06
XRN1-210ENST00000472697 BOD1L2Q8IYS8 172 aa2.2□□□□□ -2.06
XRN1-210ENST00000472697 GABRG1Q8N1C3 465 aa2.2□□□□□ -2.06
XRN1-210ENST00000472697 KLHDC9Q8NEP7 349 aa2.2□□□□□ -2.06
XRN1-210ENST00000472697 DMBX1Q8NFW5 382 aa2.2□□□□□ -2.06
XRN1-210ENST00000472697 OR1S2Q8NGQ3 325 aa2.2□□□□□ -2.06
XRN1-210ENST00000472697 OR8K3Q8NH51 312 aa2.2□□□□□ -2.06
XRN1-210ENST00000472697 SETD7Q8WTS6 366 aaKnown RBP2.2□□□□□ -2.06
XRN1-210ENST00000472697 GLYATL2Q8WU03 294 aa2.2□□□□□ -2.06
XRN1-210ENST00000472697 MAIP1Q8WWC4 291 aa2.2□□□□□ -2.06
XRN1-210ENST00000472697 BAALCQ8WXS3 180 aa2.2□□□□□ -2.06
XRN1-210ENST00000472697 SLC38A4Q969I6 547 aa2.2□□□□□ -2.06
XRN1-210ENST00000472697 MYLPFQ96A32 169 aa2.2□□□□□ -2.06
XRN1-210ENST00000472697 ZNF396Q96N95 335 aaPredicted RBP2.2□□□□□ -2.06
XRN1-210ENST00000472697 CNN2Q99439 309 aaKnown RBP2.2□□□□□ -2.06
XRN1-210ENST00000472697 MAPKAP1Q9BPZ7 522 aa2.2□□□□□ -2.06
XRN1-210ENST00000472697 MYOZ2Q9NPC6 264 aa2.2□□□□□ -2.06
XRN1-210ENST00000472697 STMN3Q9NZ72 180 aa2.2□□□□□ -2.06
XRN1-210ENST00000472697 PEF1Q9UBV8 284 aaKnown RBP2.2□□□□□ -2.06
XRN1-210ENST00000472697 MMP17Q9ULZ9 603 aa2.2□□□□□ -2.06
XRN1-210ENST00000472697 ROCK2O75116 1388 aaKnown RBP2.2□□□□□ -2.06
XRN1-210ENST00000472697 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.19□□□□□ -2.06
XRN1-210ENST00000472697 PLSCR5A0PG75 271 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 IGLON5A6NGN9 336 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 ZNF879B4DU55 563 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 C16orf97H3BN30 126 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 ZNF701M0R085 212 aaPredicted RBP2.19□□□□□ -2.06
XRN1-210ENST00000472697 SURF4O15260 269 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 MBTPS2O43462 519 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 WBP4O75554 376 aaKnown RBP2.19□□□□□ -2.06
XRN1-210ENST00000472697 HTR1FP30939 366 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 RPL13AP40429 203 aaKnown RBP2.19□□□□□ -2.06
XRN1-210ENST00000472697 ALDH3B1P43353 468 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 ZFP36L2P47974 494 aaKnown RBP2.19□□□□□ -2.06
XRN1-210ENST00000472697 SLC7A2P52569 658 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 TMEM50BP56557 158 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 UBE2G2P60604 165 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 SKP1P63208 163 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 CSTF1Q05048 431 aaKnown RBP2.19□□□□□ -2.06
XRN1-210ENST00000472697 ARL16Q0P5N6 197 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 RAB40BQ12829 278 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 ZNF154Q13106 437 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 ZNF177Q13360 481 aaPredicted RBP2.19□□□□□ -2.06
XRN1-210ENST00000472697 MAB21L1Q13394 359 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 CRMP1Q14194 572 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 LAGE3Q14657 143 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 GLIPR1L2Q4G1C9 344 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 MS4A13Q5J8X5 152 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 C9orf57Q5W0N0 161 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 LRRC31Q6UY01 552 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 STAC2Q6ZMT1 411 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 CREB3L2Q70SY1 520 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 MRGPRGQ86SM5 289 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 APOBEC3FQ8IUX4 373 aaKnown RBP2.19□□□□□ -2.06
XRN1-210ENST00000472697 FBXO16Q8IX29 292 aaPredicted RBP2.19□□□□□ -2.06
XRN1-210ENST00000472697 SYCE1Q8N0S2 351 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 BPIFB2Q8N4F0 458 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 MARVELD2Q8N4S9 558 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 OR9A4Q8NGU2 314 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 SECTM1Q8WVN6 248 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 C19orf60Q96EN9 201 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 DDX19BQ9UMR2 479 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 BZW2Q9Y6E2 419 aaKnown RBP2.19□□□□□ -2.06
XRN1-210ENST00000472697 DDX49Q9Y6V7 483 aaKnown RBP2.19□□□□□ -2.06
XRN1-210ENST00000472697 MYO3BQ8WXR4 1341 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 COL4A5P29400 1685 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 IGHV3-38A0A0C4DH36 116 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 A0A1B0GU03 582 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 RPL37AP8A6NKH3 93 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 M0QXV9 152 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 FBP2O00757 339 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 TFECO14948 347 aaPredicted RBP2.19□□□□□ -2.06
XRN1-210ENST00000472697 BUB3O43684 328 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 KDELR3O43731 214 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 N4BP1O75113 896 aaKnown RBP2.19□□□□□ -2.06
XRN1-210ENST00000472697 SEMA4FO95754 770 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 PRSS2P07478 247 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 PATE4P0C8F1 98 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 UBTFL6P0CB48 400 aaPredicted RBP2.19□□□□□ -2.06
XRN1-210ENST00000472697 CCL2P13500 99 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 FOSL2P15408 326 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms