RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 CHRDL1Q9BU40 450 aa2.53□□□□□ -2
PTCD3-209ENST00000472044 FAIM2Q9BWQ8 316 aa2.53□□□□□ -2
PTCD3-209ENST00000472044 ANKRD19PQ9H560 264 aa2.53□□□□□ -2
PTCD3-209ENST00000472044 AZI2Q9H6S1 392 aa2.53□□□□□ -2
PTCD3-209ENST00000472044 LY9Q9HBG7 655 aa2.53□□□□□ -2
PTCD3-209ENST00000472044 GIN1Q9NXP7 522 aa2.53□□□□□ -2
PTCD3-209ENST00000472044 HOXC10Q9NYD6 342 aa2.53□□□□□ -2
PTCD3-209ENST00000472044 CLCF1Q9UBD9 225 aa2.53□□□□□ -2
PTCD3-209ENST00000472044 TRAF3IP3Q9Y228 551 aa2.53□□□□□ -2
PTCD3-209ENST00000472044 N6AMT1Q9Y5N5 214 aa2.53□□□□□ -2
PTCD3-209ENST00000472044 NPTNQ9Y639 398 aa2.53□□□□□ -2
PTCD3-209ENST00000472044 ZNFX1Q9P2E3 1918 aaKnown RBP2.52□□□□□ -2.01
PTCD3-209ENST00000472044 A0A0G2JN53 185 aa2.52□□□□□ -2.01
PTCD3-209ENST00000472044 A0A0U1RQS6 177 aa2.52□□□□□ -2.01
PTCD3-209ENST00000472044 GJE1A6NN92 205 aa2.52□□□□□ -2.01
PTCD3-209ENST00000472044 TDGF1P13385 188 aa2.52□□□□□ -2.01
PTCD3-209ENST00000472044 CRISP2P16562 243 aa2.52□□□□□ -2.01
PTCD3-209ENST00000472044 VDAC2P45880 294 aaPredicted RBP2.52□□□□□ -2.01
PTCD3-209ENST00000472044 TDGF1P3P51864 188 aa2.52□□□□□ -2.01
PTCD3-209ENST00000472044 ZNF133P52736 654 aaPredicted RBP2.52□□□□□ -2.01
PTCD3-209ENST00000472044 SEC61GP60059 68 aa2.52□□□□□ -2.01
PTCD3-209ENST00000472044 SCRN3Q0VDG4 424 aa2.52□□□□□ -2.01
PTCD3-209ENST00000472044 CAPRIN1Q14444 709 aaKnown RBP2.52□□□□□ -2.01
PTCD3-209ENST00000472044 ZNF77Q15935 545 aa2.52□□□□□ -2.01
PTCD3-209ENST00000472044 PAGE3Q5JUK9 113 aa2.52□□□□□ -2.01
PTCD3-209ENST00000472044 GPR157Q5UAW9 335 aa2.52□□□□□ -2.01
PTCD3-209ENST00000472044 OR2A2Q6IF42 318 aa2.52□□□□□ -2.01
PTCD3-209ENST00000472044 Q6ZN92 141 aa2.52□□□□□ -2.01
PTCD3-209ENST00000472044 COX15Q7KZN9 410 aa2.52□□□□□ -2.01
PTCD3-209ENST00000472044 RUFY3Q7L099 469 aa2.52□□□□□ -2.01
PTCD3-209ENST00000472044 PAQR7Q86WK9 346 aa2.52□□□□□ -2.01
PTCD3-209ENST00000472044 RALGPS2Q86X27 583 aaPredicted RBP2.52□□□□□ -2.01
PTCD3-209ENST00000472044 ECHDC2Q86YB7 292 aa2.52□□□□□ -2.01
PTCD3-209ENST00000472044 TGIF2LXQ8IUE1 241 aa2.52□□□□□ -2.01
PTCD3-209ENST00000472044 PIANPQ8IYJ0 282 aa2.52□□□□□ -2.01
PTCD3-209ENST00000472044 FAM71E2Q8N5Q1 922 aa2.52□□□□□ -2.01
PTCD3-209ENST00000472044 FNDC5Q8NAU1 212 aa2.52□□□□□ -2.01
PTCD3-209ENST00000472044 OR1L4Q8NGR5 311 aa2.52□□□□□ -2.01
PTCD3-209ENST00000472044 OR13C2Q8NGS9 318 aa2.52□□□□□ -2.01
PTCD3-209ENST00000472044 OR9G1Q8NH87 305 aa2.52□□□□□ -2.01
PTCD3-209ENST00000472044 BLOC1S5Q8TDH9 187 aa2.52□□□□□ -2.01
PTCD3-209ENST00000472044 ARPC1AQ92747 370 aa2.52□□□□□ -2.01
PTCD3-209ENST00000472044 ZNF641Q96N77 438 aaPredicted RBP2.52□□□□□ -2.01
PTCD3-209ENST00000472044 CNN2Q99439 309 aaKnown RBP2.52□□□□□ -2.01
PTCD3-209ENST00000472044 RASL11BQ9BPW5 248 aa2.52□□□□□ -2.01
PTCD3-209ENST00000472044 RIOK1Q9BRS2 568 aaKnown RBP2.52□□□□□ -2.01
PTCD3-209ENST00000472044 NAT9Q9BTE0 207 aa2.52□□□□□ -2.01
PTCD3-209ENST00000472044 TRIM62Q9BVG3 475 aa2.52□□□□□ -2.01
PTCD3-209ENST00000472044 GON7Q9BXV9 100 aa2.52□□□□□ -2.01
PTCD3-209ENST00000472044 ACTR6Q9GZN1 396 aa2.52□□□□□ -2.01
PTCD3-209ENST00000472044 ROGDIQ9GZN7 287 aa2.52□□□□□ -2.01
PTCD3-209ENST00000472044 DEFB127Q9H1M4 99 aa2.52□□□□□ -2.01
PTCD3-209ENST00000472044 GBA3Q9H227 469 aa2.52□□□□□ -2.01
PTCD3-209ENST00000472044 NMRAL1Q9HBL8 299 aa2.52□□□□□ -2.01
PTCD3-209ENST00000472044 GLRX2Q9NS18 164 aa2.52□□□□□ -2.01
PTCD3-209ENST00000472044 HYPKQ9NX55 129 aa2.52□□□□□ -2.01
PTCD3-209ENST00000472044 QPCTLQ9NXS2 382 aa2.52□□□□□ -2.01
PTCD3-209ENST00000472044 KCNIP1Q9NZI2 227 aa2.52□□□□□ -2.01
PTCD3-209ENST00000472044 ZNF225Q9UK10 706 aa2.52□□□□□ -2.01
PTCD3-209ENST00000472044 KCNIP3Q9Y2W7 256 aa2.52□□□□□ -2.01
PTCD3-209ENST00000472044 A0A0G2JLM5 398 aa2.51□□□□□ -2.01
PTCD3-209ENST00000472044 A0A1B0GVL5 298 aa2.51□□□□□ -2.01
PTCD3-209ENST00000472044 INSP01308 110 aa2.51□□□□□ -2.01
PTCD3-209ENST00000472044 FGF1P05230 155 aa2.51□□□□□ -2.01
PTCD3-209ENST00000472044 MX1P20591 662 aa2.51□□□□□ -2.01
PTCD3-209ENST00000472044 FMO3P31513 532 aa2.51□□□□□ -2.01
PTCD3-209ENST00000472044 FDFT1P37268 417 aa2.51□□□□□ -2.01
PTCD3-209ENST00000472044 VHLP40337 213 aa2.51□□□□□ -2.01
PTCD3-209ENST00000472044 YAP1P46937 504 aaKnown RBP2.51□□□□□ -2.01
PTCD3-209ENST00000472044 GYG1P46976 350 aa2.51□□□□□ -2.01
PTCD3-209ENST00000472044 CSNK1DP48730 415 aa2.51□□□□□ -2.01
PTCD3-209ENST00000472044 SH3BGRP55822 239 aaPredicted RBP2.51□□□□□ -2.01
PTCD3-209ENST00000472044 ERVK-25P63136 954 aa2.51□□□□□ -2.01
PTCD3-209ENST00000472044 PLD1Q13393 1074 aa2.51□□□□□ -2.01
PTCD3-209ENST00000472044 ZMYND11Q15326 602 aa2.51□□□□□ -2.01
PTCD3-209ENST00000472044 IMMTQ16891 758 aaKnown RBP2.51□□□□□ -2.01
PTCD3-209ENST00000472044 CTSL3PQ5NE16 218 aa2.51□□□□□ -2.01
PTCD3-209ENST00000472044 C1orf94Q6P1W5 598 aa2.51□□□□□ -2.01
PTCD3-209ENST00000472044 ACP7Q6ZNF0 438 aa2.51□□□□□ -2.01
PTCD3-209ENST00000472044 ZNF620Q6ZNG0 422 aa2.51□□□□□ -2.01
PTCD3-209ENST00000472044 ZNF546Q86UE3 836 aa2.51□□□□□ -2.01
PTCD3-209ENST00000472044 PLA2G4DQ86XP0 818 aa2.51□□□□□ -2.01
PTCD3-209ENST00000472044 MFSD6LQ8IWD5 586 aa2.51□□□□□ -2.01
PTCD3-209ENST00000472044 MKXQ8IYA7 352 aa2.51□□□□□ -2.01
PTCD3-209ENST00000472044 TPRX1Q8N7U7 411 aa2.51□□□□□ -2.01
PTCD3-209ENST00000472044 OR10G9Q8NGN4 311 aa2.51□□□□□ -2.01
PTCD3-209ENST00000472044 PYROXD1Q8WU10 500 aa2.51□□□□□ -2.01
PTCD3-209ENST00000472044 SHC3Q92529 594 aa2.51□□□□□ -2.01
PTCD3-209ENST00000472044 ZNF799Q96GE5 643 aa2.51□□□□□ -2.01
PTCD3-209ENST00000472044 ZNF414Q96IQ9 312 aa2.51□□□□□ -2.01
PTCD3-209ENST00000472044 OR2M2Q96R28 347 aa2.51□□□□□ -2.01
PTCD3-209ENST00000472044 RNF167Q9H6Y7 350 aa2.51□□□□□ -2.01
PTCD3-209ENST00000472044 EML4Q9HC35 981 aaKnown RBP2.51□□□□□ -2.01
PTCD3-209ENST00000472044 CACNG2Q9Y698 323 aa2.51□□□□□ -2.01
PTCD3-209ENST00000472044 NACAE9PAV3 2078 aa2.51□□□□□ -2.01
PTCD3-209ENST00000472044 NKX2-6A6NCS4 301 aa2.5□□□□□ -2.01
PTCD3-209ENST00000472044 C12orf71A8MTZ7 269 aa2.5□□□□□ -2.01
PTCD3-209ENST00000472044 C12orf77C9JDV5 145 aa2.5□□□□□ -2.01
PTCD3-209ENST00000472044 HAS3O00219 553 aa2.5□□□□□ -2.01
PTCD3-209ENST00000472044 FOXE1O00358 373 aaPredicted RBP2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms