RNA–Protein interactions for RNA: ENST00000471812.5

GGPS1-204, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2

Gene GGPS1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-204ENST00000471812 NAV3Q8IVL0 2385 aa8.28□□□□□ -1.08
GGPS1-204ENST00000471812 NIPBLQ6KC79 2804 aaeCLIP8.28□□□□□ -1.08
GGPS1-204ENST00000471812 SONP18583 2426 aaKnown RBP8.28□□□□□ -1.08
GGPS1-204ENST00000471812 TMEM247A6NEH6 219 aa8.28□□□□□ -1.08
GGPS1-204ENST00000471812 ZNF503-AS2A6NEH8 195 aa8.28□□□□□ -1.08
GGPS1-204ENST00000471812 CPSF4LA6NMK7 179 aaKnown RBP8.28□□□□□ -1.08
GGPS1-204ENST00000471812 SHISA9B4DS77 424 aa8.28□□□□□ -1.08
GGPS1-204ENST00000471812 CLOCKO15516 846 aa8.28□□□□□ -1.08
GGPS1-204ENST00000471812 FZD7O75084 574 aa8.28□□□□□ -1.08
GGPS1-204ENST00000471812 NDUFS7O75251 213 aa8.28□□□□□ -1.08
GGPS1-204ENST00000471812 SEC14L2O76054 403 aa8.28□□□□□ -1.08
GGPS1-204ENST00000471812 LGI1O95970 557 aa8.28□□□□□ -1.08
GGPS1-204ENST00000471812 BGLAPP02818 100 aa8.28□□□□□ -1.08
GGPS1-204ENST00000471812 SOD3P08294 240 aa8.28□□□□□ -1.08
GGPS1-204ENST00000471812 TROVE2P10155 538 aaKnown RBP eCLIP8.28□□□□□ -1.08
GGPS1-204ENST00000471812 CDH2P19022 906 aaPredicted RBP8.28□□□□□ -1.08
GGPS1-204ENST00000471812 PPIBP23284 216 aaKnown RBP8.28□□□□□ -1.08
GGPS1-204ENST00000471812 CLK1P49759 484 aaKnown RBP8.28□□□□□ -1.08
GGPS1-204ENST00000471812 ZNF83P51522 516 aa8.28□□□□□ -1.08
GGPS1-204ENST00000471812 NR1H2P55055 460 aa8.28□□□□□ -1.08
GGPS1-204ENST00000471812 COPZ1P61923 177 aa8.28□□□□□ -1.08
GGPS1-204ENST00000471812 GABRA6Q16445 453 aa8.28□□□□□ -1.08
GGPS1-204ENST00000471812 ACKR1Q16570 336 aa8.28□□□□□ -1.08
GGPS1-204ENST00000471812 VMACQ2NL98 169 aa8.28□□□□□ -1.08
GGPS1-204ENST00000471812 HIKESHIQ53FT3 197 aa8.28□□□□□ -1.08
GGPS1-204ENST00000471812 BEX5Q5H9J7 111 aa8.28□□□□□ -1.08
GGPS1-204ENST00000471812 ALG10BQ5I7T1 473 aa8.28□□□□□ -1.08
GGPS1-204ENST00000471812 METTL21CQ5VZV1 264 aa8.28□□□□□ -1.08
GGPS1-204ENST00000471812 NHLRC1Q6VVB1 395 aa8.28□□□□□ -1.08
GGPS1-204ENST00000471812 CREB3L2Q70SY1 520 aa8.28□□□□□ -1.08
GGPS1-204ENST00000471812 MYPOPQ86VE0 399 aaPredicted RBP8.28□□□□□ -1.08
GGPS1-204ENST00000471812 MEX3DQ86XN8 651 aaKnown RBP8.28□□□□□ -1.08
GGPS1-204ENST00000471812 TGIF2LYQ8IUE0 185 aa8.28□□□□□ -1.08
GGPS1-204ENST00000471812 UBE2J2Q8N2K1 259 aa8.28□□□□□ -1.08
GGPS1-204ENST00000471812 LRRC17Q8N6Y2 441 aa8.28□□□□□ -1.08
GGPS1-204ENST00000471812 C11orf65Q8NCR3 313 aa8.28□□□□□ -1.08
GGPS1-204ENST00000471812 STEAP2Q8NFT2 490 aa8.28□□□□□ -1.08
GGPS1-204ENST00000471812 AKAP1Q92667 903 aaKnown RBP eCLIP8.28□□□□□ -1.08
GGPS1-204ENST00000471812 MBD6Q96DN6 1003 aa8.28□□□□□ -1.08
GGPS1-204ENST00000471812 ALKBH3Q96Q83 286 aaPredicted RBP8.28□□□□□ -1.08
GGPS1-204ENST00000471812 MCHR1Q99705 422 aa8.28□□□□□ -1.08
GGPS1-204ENST00000471812 DLL4Q9NR61 685 aa8.28□□□□□ -1.08
GGPS1-204ENST00000471812 TMEM45AQ9NWC5 275 aa8.28□□□□□ -1.08
GGPS1-204ENST00000471812 THUMPD1Q9NXG2 353 aaKnown RBP8.28□□□□□ -1.08
GGPS1-204ENST00000471812 TRIM33Q9UPN9 1127 aa8.28□□□□□ -1.08
GGPS1-204ENST00000471812 ANGPT4Q9Y264 503 aa8.28□□□□□ -1.08
GGPS1-204ENST00000471812 SLC25A15Q9Y619 301 aa8.28□□□□□ -1.08
GGPS1-204ENST00000471812 A0A096LPE4 126 aa8.27□□□□□ -1.09
GGPS1-204ENST00000471812 A0A1W2PPZ6 126 aa8.27□□□□□ -1.09
GGPS1-204ENST00000471812 OR5H1A6NKK0 313 aa8.27□□□□□ -1.09
GGPS1-204ENST00000471812 ELOA3DA6NLF2 546 aaPredicted RBP8.27□□□□□ -1.09
GGPS1-204ENST00000471812 ADARB2-AS1A8MUL3 147 aa8.27□□□□□ -1.09
GGPS1-204ENST00000471812 MS4A18H0YCH9 400 aa8.27□□□□□ -1.09
GGPS1-204ENST00000471812 NME4O00746 187 aa8.27□□□□□ -1.09
GGPS1-204ENST00000471812 DNPH1O43598 174 aa8.27□□□□□ -1.09
GGPS1-204ENST00000471812 TRAF3IP2O43734 574 aaPredicted RBP8.27□□□□□ -1.09
GGPS1-204ENST00000471812 MRPL33O75394 65 aaKnown RBP8.27□□□□□ -1.09
GGPS1-204ENST00000471812 GPIP06744 558 aa8.27□□□□□ -1.09
GGPS1-204ENST00000471812 DRD4P21917 467 aa8.27□□□□□ -1.09
GGPS1-204ENST00000471812 HOXC12P31275 282 aa8.27□□□□□ -1.09
GGPS1-204ENST00000471812 OR1E2P47887 323 aa8.27□□□□□ -1.09
GGPS1-204ENST00000471812 CLDN17P56750 224 aa8.27□□□□□ -1.09
GGPS1-204ENST00000471812 P2RY6Q15077 328 aa8.27□□□□□ -1.09
GGPS1-204ENST00000471812 PPA1Q15181 289 aa8.27□□□□□ -1.09
GGPS1-204ENST00000471812 MS4A18Q3C1V0 323 aa8.27□□□□□ -1.09
GGPS1-204ENST00000471812 ELOA3BQ3SY89 546 aa8.27□□□□□ -1.09
GGPS1-204ENST00000471812 ENTPD8Q5MY95 495 aa8.27□□□□□ -1.09
GGPS1-204ENST00000471812 NIPAL3Q6P499 406 aa8.27□□□□□ -1.09
GGPS1-204ENST00000471812 Q71RC1 249 aaPredicted RBP8.27□□□□□ -1.09
GGPS1-204ENST00000471812 AAED1Q7RTV5 226 aa8.27□□□□□ -1.09
GGPS1-204ENST00000471812 LSMEM1Q8N8F7 131 aa8.27□□□□□ -1.09
GGPS1-204ENST00000471812 RBM15BQ8NDT2 890 aaKnown RBP8.27□□□□□ -1.09
GGPS1-204ENST00000471812 ELOA3Q8NG57 546 aa8.27□□□□□ -1.09
GGPS1-204ENST00000471812 STK35Q8TDR2 534 aa8.27□□□□□ -1.09
GGPS1-204ENST00000471812 TSPEARQ8WU66 669 aa8.27□□□□□ -1.09
GGPS1-204ENST00000471812 HTRA1Q92743 480 aa8.27□□□□□ -1.09
GGPS1-204ENST00000471812 SLC38A4Q969I6 547 aa8.27□□□□□ -1.09
GGPS1-204ENST00000471812 ZHX1-C8orf76Q96EF9 292 aa8.27□□□□□ -1.09
GGPS1-204ENST00000471812 PERPQ96FX8 193 aa8.27□□□□□ -1.09
GGPS1-204ENST00000471812 TXNDC15Q96J42 360 aa8.27□□□□□ -1.09
GGPS1-204ENST00000471812 ALPK1Q96QP1 1244 aa8.27□□□□□ -1.09
GGPS1-204ENST00000471812 ELAC2Q9BQ52 826 aaKnown RBP8.27□□□□□ -1.09
GGPS1-204ENST00000471812 PRSS27Q9BQR3 290 aa8.27□□□□□ -1.09
GGPS1-204ENST00000471812 SIKE1Q9BRV8 207 aa8.27□□□□□ -1.09
GGPS1-204ENST00000471812 NAA11Q9BSU3 229 aaPredicted RBP8.27□□□□□ -1.09
GGPS1-204ENST00000471812 EMC6Q9BV81 110 aa8.27□□□□□ -1.09
GGPS1-204ENST00000471812 FAM107BQ9H098 131 aa8.27□□□□□ -1.09
GGPS1-204ENST00000471812 EMC3Q9P0I2 261 aa8.27□□□□□ -1.09
GGPS1-204ENST00000471812 MALT1Q9UDY8 824 aa8.27□□□□□ -1.09
GGPS1-204ENST00000471812 SNX13Q9Y5W8 968 aa8.27□□□□□ -1.09
GGPS1-204ENST00000471812 CAPN7Q9Y6W3 813 aa8.27□□□□□ -1.09
GGPS1-204ENST00000471812 YLPM1P49750 1951 aaKnown RBP8.26□□□□□ -1.09
GGPS1-204ENST00000471812 A0A087WUJ7 227 aa8.26□□□□□ -1.09
GGPS1-204ENST00000471812 TRIM64A6NGJ6 449 aa8.26□□□□□ -1.09
GGPS1-204ENST00000471812 TRIM64BA6NI03 449 aa8.26□□□□□ -1.09
GGPS1-204ENST00000471812 KPNA4O00629 521 aaPredicted RBP8.26□□□□□ -1.09
GGPS1-204ENST00000471812 HS3ST1O14792 307 aa8.26□□□□□ -1.09
GGPS1-204ENST00000471812 PIP5K1CO60331 668 aa8.26□□□□□ -1.09
GGPS1-204ENST00000471812 ZNF432O94892 652 aa8.26□□□□□ -1.09
GGPS1-204ENST00000471812 AHSA1O95433 338 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms