RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 MIER2Q8N344 545 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 FGFBP3Q8TAT2 258 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 ZNF417Q8TAU3 575 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 C10orf105Q8TEF2 133 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 ITCHQ96J02 903 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 FOXN4Q96NZ1 517 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 MOGAT1Q96PD6 335 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 ZNF587Q96SQ5 575 aaPredicted RBP7.02□□□□□ -1.29
USP48-207ENST00000471752 GRIP2Q9C0E4 1043 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 ALG2Q9H553 416 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 GPR35Q9HC97 309 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 BCL2L10Q9HD36 194 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 A4GALTQ9NPC4 353 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 PARPBPQ9NWS1 579 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 CCDC167Q9P0B6 97 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 P2RX2Q9UBL9 471 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 SLC9A8Q9Y2E8 581 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 A0A096LPI6 279 aa7.01□□□□□ -1.29
USP48-207ENST00000471752 IGHV4-61A0A0C4DH41 118 aa7.01□□□□□ -1.29
USP48-207ENST00000471752 ELOA3DA6NLF2 546 aaPredicted RBP7.01□□□□□ -1.29
USP48-207ENST00000471752 VWC2LB2RUY7 222 aa7.01□□□□□ -1.29
USP48-207ENST00000471752 TRAF3IP2O43734 574 aaPredicted RBP7.01□□□□□ -1.29
USP48-207ENST00000471752 TMCC2O75069 709 aa7.01□□□□□ -1.29
USP48-207ENST00000471752 SNUPNO95149 360 aaKnown RBP7.01□□□□□ -1.29
USP48-207ENST00000471752 BGLAPP02818 100 aa7.01□□□□□ -1.29
USP48-207ENST00000471752 CECR9P0C854 216 aa7.01□□□□□ -1.29
USP48-207ENST00000471752 PATE4P0C8F1 98 aa7.01□□□□□ -1.29
USP48-207ENST00000471752 IGHV4-31P0DP07 118 aa7.01□□□□□ -1.29
USP48-207ENST00000471752 ARAFP10398 606 aa7.01□□□□□ -1.29
USP48-207ENST00000471752 BMP2P12643 396 aa7.01□□□□□ -1.29
USP48-207ENST00000471752 IL2RGP31785 369 aa7.01□□□□□ -1.29
USP48-207ENST00000471752 APOBEC3AP31941 199 aaPredicted RBP7.01□□□□□ -1.29
USP48-207ENST00000471752 THBS4P35443 961 aa7.01□□□□□ -1.29
USP48-207ENST00000471752 PRPS1P60891 318 aa7.01□□□□□ -1.29
USP48-207ENST00000471752 ROR2Q01974 943 aaKnown RBP7.01□□□□□ -1.29
USP48-207ENST00000471752 ADIPOQQ15848 244 aa7.01□□□□□ -1.29
USP48-207ENST00000471752 ELOA3BQ3SY89 546 aa7.01□□□□□ -1.29
USP48-207ENST00000471752 AGKQ53H12 422 aa7.01□□□□□ -1.29
USP48-207ENST00000471752 LRIF1Q5T3J3 769 aa7.01□□□□□ -1.29
USP48-207ENST00000471752 C6orf52Q5T4I8 152 aa7.01□□□□□ -1.29
USP48-207ENST00000471752 PRAMEF8Q5VWM4 474 aa7.01□□□□□ -1.29
USP48-207ENST00000471752 PRAMEF7Q5VXH5 474 aa7.01□□□□□ -1.29
USP48-207ENST00000471752 KLHL17Q6TDP4 642 aa7.01□□□□□ -1.29
USP48-207ENST00000471752 WDR88Q6ZMY6 472 aa7.01□□□□□ -1.29
USP48-207ENST00000471752 LRP11Q86VZ4 500 aa7.01□□□□□ -1.29
USP48-207ENST00000471752 CARM1Q86X55 608 aa7.01□□□□□ -1.29
USP48-207ENST00000471752 PTOV1Q86YD1 416 aa7.01□□□□□ -1.29
USP48-207ENST00000471752 HIPK1Q86Z02 1210 aa7.01□□□□□ -1.29
USP48-207ENST00000471752 PHC2Q8IXK0 858 aa7.01□□□□□ -1.29
USP48-207ENST00000471752 TMEM123Q8N131 208 aa7.01□□□□□ -1.29
USP48-207ENST00000471752 SMYD1Q8NB12 490 aa7.01□□□□□ -1.29
USP48-207ENST00000471752 ELOA3Q8NG57 546 aa7.01□□□□□ -1.29
USP48-207ENST00000471752 MFSD8Q8NHS3 518 aa7.01□□□□□ -1.29
USP48-207ENST00000471752 OIT3Q8WWZ8 545 aa7.01□□□□□ -1.29
USP48-207ENST00000471752 OR2M2Q96R28 347 aa7.01□□□□□ -1.29
USP48-207ENST00000471752 TNFRSF13CQ96RJ3 184 aa7.01□□□□□ -1.29
USP48-207ENST00000471752 USB1Q9BQ65 265 aaKnown RBP7.01□□□□□ -1.29
USP48-207ENST00000471752 RHNO1Q9BSD3 238 aa7.01□□□□□ -1.29
USP48-207ENST00000471752 SF3B5Q9BWJ5 86 aaKnown RBP7.01□□□□□ -1.29
USP48-207ENST00000471752 TCF7L2Q9NQB0 619 aa7.01□□□□□ -1.29
USP48-207ENST00000471752 TMEM45AQ9NWC5 275 aa7.01□□□□□ -1.29
USP48-207ENST00000471752 MED29Q9NX70 200 aa7.01□□□□□ -1.29
USP48-207ENST00000471752 NKIRAS1Q9NYS0 192 aa7.01□□□□□ -1.29
USP48-207ENST00000471752 USP22Q9UPT9 525 aa7.01□□□□□ -1.29
USP48-207ENST00000471752 PKD1L1Q8TDX9 2849 aa7.01□□□□□ -1.29
USP48-207ENST00000471752 YLPM1P49750 1951 aaKnown RBP7□□□□□ -1.29
USP48-207ENST00000471752 CHD3Q12873 2000 aaKnown RBP7□□□□□ -1.29
USP48-207ENST00000471752 SH3PXD2BA1X283 911 aa7□□□□□ -1.29
USP48-207ENST00000471752 LRP5LA4QPB2 252 aa7□□□□□ -1.29
USP48-207ENST00000471752 A8MV72 311 aaPredicted RBP7□□□□□ -1.29
USP48-207ENST00000471752 H7C417 338 aa7□□□□□ -1.29
USP48-207ENST00000471752 M0R3G1 203 aa7□□□□□ -1.29
USP48-207ENST00000471752 M0R3H8 397 aa7□□□□□ -1.29
USP48-207ENST00000471752 F12P00748 615 aaPredicted RBP7□□□□□ -1.29
USP48-207ENST00000471752 HLA-HP01893 362 aa7□□□□□ -1.29
USP48-207ENST00000471752 OPN1SWP03999 348 aa7□□□□□ -1.29
USP48-207ENST00000471752 OR4A8P0C604 315 aa7□□□□□ -1.29
USP48-207ENST00000471752 ZNF16P17020 682 aaPredicted RBP7□□□□□ -1.29
USP48-207ENST00000471752 FKBP2P26885 142 aaKnown RBP7□□□□□ -1.29
USP48-207ENST00000471752 EFNA4P52798 201 aa7□□□□□ -1.29
USP48-207ENST00000471752 CRYBA2P53672 197 aa7□□□□□ -1.29
USP48-207ENST00000471752 CDH12P55289 794 aa7□□□□□ -1.29
USP48-207ENST00000471752 COPZ1P61923 177 aa7□□□□□ -1.29
USP48-207ENST00000471752 CDK6Q00534 326 aa7□□□□□ -1.29
USP48-207ENST00000471752 NAAAQ02083 359 aa7□□□□□ -1.29
USP48-207ENST00000471752 PIGFQ07326 219 aa7□□□□□ -1.29
USP48-207ENST00000471752 LOXL1Q08397 574 aaPredicted RBP7□□□□□ -1.29
USP48-207ENST00000471752 GNA13Q14344 377 aa7□□□□□ -1.29
USP48-207ENST00000471752 LARS2Q15031 903 aaKnown RBP7□□□□□ -1.29
USP48-207ENST00000471752 OR1Q1Q15612 314 aa7□□□□□ -1.29
USP48-207ENST00000471752 CARTPTQ16568 116 aa7□□□□□ -1.29
USP48-207ENST00000471752 DUSP7Q16829 419 aa7□□□□□ -1.29
USP48-207ENST00000471752 CEACAM16Q2WEN9 425 aa7□□□□□ -1.29
USP48-207ENST00000471752 RUNDC3AQ59EK9 446 aa7□□□□□ -1.29
USP48-207ENST00000471752 ZNF544Q6NX49 715 aa7□□□□□ -1.29
USP48-207ENST00000471752 MDP1Q86V88 176 aa7□□□□□ -1.29
USP48-207ENST00000471752 ZNF440Q8IYI8 595 aa7□□□□□ -1.29
USP48-207ENST00000471752 LRRC17Q8N6Y2 441 aa7□□□□□ -1.29
USP48-207ENST00000471752 GPR32P1Q8NGA4 272 aa7□□□□□ -1.29
USP48-207ENST00000471752 STK35Q8TDR2 534 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms