RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 PLAC9Q5JTB6 97 aa12.34□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 MAMSTRQ6ZN01 415 aa12.34□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 AAED1Q7RTV5 226 aa12.34□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 OR10AD1Q8NGE0 317 aa12.34□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 ZBED3Q96IU2 234 aaPredicted RBP12.34□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 DDX31Q9H8H2 851 aaKnown RBP12.34□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 HIDE1A8MVS5 230 aa12.34□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 MSMO1Q15800 293 aa12.34□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 ADGRF3Q8IZF5 1079 aa12.34□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 ZADH2Q8N4Q0 377 aa12.34□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 OR10X1Q8NGY0 326 aa12.34□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 HRASLS5Q96KN8 279 aa12.34□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 HYLS1Q96M11 299 aa12.34□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 PRRC1Q96M27 445 aa12.34□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 MBOAT4Q96T53 435 aa12.34□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 SGPP1Q9BX95 441 aa12.34□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 IL26Q9NPH9 171 aa12.34□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 KIF1AQ12756 1690 aa12.34□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 ARPC1BO15143 372 aaKnown RBP12.34□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 CIDEAO60543 219 aa12.34□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 SLC43A1O75387 559 aa12.34□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 OCSTAMPQ9BR26 566 aa12.34□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 TMEM43Q9BTV4 400 aa12.34□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 SELENOIQ9C0D9 397 aa12.34□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 NT5DC2Q9H857 520 aa12.34□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 OBP2AQ9NY56 170 aa12.34□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 NKX6-3A6NJ46 265 aa12.34□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 METTL15P1P0C7V9 234 aa12.34□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 PIPP12273 146 aaPredicted RBP12.34□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 EN2P19622 333 aaPredicted RBP12.34□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 FAM58AQ8N1B3 248 aa12.34□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 CLSTN3Q9BQT9 956 aa12.34□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 MAF1Q9H063 256 aa12.34□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 QRSL1Q9H0R6 528 aaKnown RBP12.34□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 CBLCQ9ULV8 474 aa12.34□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 NPTNQ9Y639 398 aa12.34□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 OSMP13725 252 aa12.34□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 ZNF17P17021 662 aa12.34□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 GM2AP17900 193 aa12.34□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 DCDP81605 110 aaKnown RBP12.34□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 ADPRMQ3LIE5 342 aa12.34□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 RAB41Q5JT25 222 aa12.34□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 ZNF705AQ6ZN79 300 aaPredicted RBP12.34□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 FER1L6-AS2Q96M78 137 aa12.34□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 AKAIN1P0CW23 69 aa12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 PRKACAP17612 351 aa12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 DUSP2Q05923 314 aa12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 GK2Q14410 553 aaPredicted RBP12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 MICAQ29983 383 aa12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 SLC22A25Q6T423 547 aa12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 FUBP1Q96AE4 644 aaKnown RBP12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 DMRT3Q9NQL9 472 aa12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 FAM166BA8MTA8 275 aa12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 CHATP28329 748 aa12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 PHYHD1Q5SRE7 291 aa12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 GDPD3Q7L5L3 318 aa12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 DEFB108BQ8NET1 73 aa12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 WNK2Q9Y3S1 2297 aa12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 NCR1O76036 304 aa12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 SORBS2O94875 1100 aaKnown RBP12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 RAB6CQ53S08 254 aa12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ENTPD8Q5MY95 495 aa12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 BLOC1S3Q6QNY0 202 aa12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 TAS1R1Q7RTX1 841 aa12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 FUNDC2Q9BWH2 189 aa12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 RAB6CQ9H0N0 254 aa12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ZMAT3Q9HA38 289 aaKnown RBP12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 AQP9O43315 295 aa12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 S100A4P26447 101 aaKnown RBP12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 GTDC1Q4AE62 458 aa12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 NLRP8Q86W28 1048 aa12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 OCEL1Q9H607 264 aa12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 PRKYO43930 277 aa12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 DCTP40126 519 aa12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ILKQ13418 452 aa12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ZNF169Q14929 603 aaPredicted RBP12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 VWA2Q5GFL6 755 aa12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 FADS6Q8N9I5 356 aa12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ADAMTS16Q8TE57 1224 aa12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 SLC38A5Q8WUX1 472 aa12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 PATZ1Q9HBE1 687 aaKnown RBP12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 SLC6A20Q9NP91 592 aa12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 MRPL22Q9NWU5 206 aaKnown RBP12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ATP23Q9Y6H3 246 aa12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ANKRD26Q9UPS8 1709 aa12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 TNK1Q13470 666 aa12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 UCN3Q969E3 161 aa12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 GDE1Q9NZC3 331 aa12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ZNF337Q9Y3M9 751 aa12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 NUMBLQ9Y6R0 609 aa12.33□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 KLF11O14901 512 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 MED6O75586 246 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ADH4P08319 380 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 WNT4P56705 351 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 RGNQ15493 299 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 CLLU1OSQ5K130 101 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 DEDD2Q8WXF8 326 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ACOT13Q9NPJ3 140 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 THSD1Q9NS62 852 aa12.32□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 PPT1P50897 306 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms