RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 NMUR2Q9GZQ4 415 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 RACGAP1Q9H0H5 632 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 SLITRK2Q9H156 845 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 OR51I1Q9H343 314 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 ZMAT3Q9HA38 289 aaKnown RBP5.88□□□□□ -1.47
HDAC1-204ENST00000471488 BEX1Q9HBH7 125 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 MOV10Q9HCE1 1003 aaKnown RBP5.88□□□□□ -1.47
HDAC1-204ENST00000471488 TNFRSF12AQ9NP84 129 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 ATAD3AQ9NVI7 634 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 GPATCH2Q9NW75 528 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 CRNNQ9UBG3 495 aaPredicted RBP5.88□□□□□ -1.47
HDAC1-204ENST00000471488 GIMAP2Q9UG22 337 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 OSGIN1Q9UJX0 560 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 NUP50Q9UKX7 468 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 TRAPPC4Q9Y296 219 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 WDR45Q9Y484 360 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 WIPI2Q9Y4P8 454 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 AUP1Q9Y679 476 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 CACNG2Q9Y698 323 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 NOTCH1P46531 2555 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 IGHV1-69-2A0A0G2JMI3 117 aa5.87□□□□□ -1.47
HDAC1-204ENST00000471488 RNF103-CHMP3A0A140T963 221 aa5.87□□□□□ -1.47
HDAC1-204ENST00000471488 MDFIC2A0A1B0GVS7 189 aa5.87□□□□□ -1.47
HDAC1-204ENST00000471488 EXOC1LA0A1B0GW35 172 aa5.87□□□□□ -1.47
HDAC1-204ENST00000471488 SERTM1A2A2V5 107 aa5.87□□□□□ -1.47
HDAC1-204ENST00000471488 LIPT2A6NK58 231 aa5.87□□□□□ -1.47
HDAC1-204ENST00000471488 AQP7P3A6NL99 342 aa5.87□□□□□ -1.47
HDAC1-204ENST00000471488 DUXAA6NLW8 204 aa5.87□□□□□ -1.47
HDAC1-204ENST00000471488 TMEM114B3SHH9 223 aa5.87□□□□□ -1.47
HDAC1-204ENST00000471488 PEX11AO75192 247 aa5.87□□□□□ -1.47
HDAC1-204ENST00000471488 SLC43A1O75387 559 aa5.87□□□□□ -1.47
HDAC1-204ENST00000471488 CLPTM1O96005 669 aa5.87□□□□□ -1.47
HDAC1-204ENST00000471488 LCKP06239 509 aa5.87□□□□□ -1.47
HDAC1-204ENST00000471488 RNASE1P07998 156 aaKnown RBP5.87□□□□□ -1.47
HDAC1-204ENST00000471488 SNRPAP09012 282 aaKnown RBP5.87□□□□□ -1.47
HDAC1-204ENST00000471488 OR12D1P0DN82 309 aa5.87□□□□□ -1.47
HDAC1-204ENST00000471488 ZNF43P17038 809 aa5.87□□□□□ -1.47
HDAC1-204ENST00000471488 DRD4P21917 467 aa5.87□□□□□ -1.47
HDAC1-204ENST00000471488 CBLP22681 906 aa5.87□□□□□ -1.47
HDAC1-204ENST00000471488 PAX7P23759 505 aa5.87□□□□□ -1.47
HDAC1-204ENST00000471488 GATA3P23771 443 aa5.87□□□□□ -1.47
HDAC1-204ENST00000471488 GCH1P30793 250 aa5.87□□□□□ -1.47
HDAC1-204ENST00000471488 PGM1P36871 562 aa5.87□□□□□ -1.47
HDAC1-204ENST00000471488 FRKP42685 505 aaPredicted RBP5.87□□□□□ -1.47
HDAC1-204ENST00000471488 ATP4BP51164 291 aa5.87□□□□□ -1.47
HDAC1-204ENST00000471488 AQP5P55064 265 aa5.87□□□□□ -1.47
HDAC1-204ENST00000471488 SH3BGRP55822 239 aaPredicted RBP5.87□□□□□ -1.47
HDAC1-204ENST00000471488 RPS23P62266 143 aaKnown RBP5.87□□□□□ -1.47
HDAC1-204ENST00000471488 KCNJ10P78508 379 aa5.87□□□□□ -1.47
HDAC1-204ENST00000471488 TEKQ02763 1124 aa5.87□□□□□ -1.47
HDAC1-204ENST00000471488 PDE7AQ13946 482 aa5.87□□□□□ -1.47
HDAC1-204ENST00000471488 SLC9A3R2Q15599 337 aa5.87□□□□□ -1.47
HDAC1-204ENST00000471488 GSG1Q2KHT4 349 aa5.87□□□□□ -1.47
HDAC1-204ENST00000471488 C3orf36Q3SXR2 165 aa5.87□□□□□ -1.47
HDAC1-204ENST00000471488 FBLN7Q53RD9 439 aa5.87□□□□□ -1.47
HDAC1-204ENST00000471488 C1QTNF12Q5T7M4 302 aa5.87□□□□□ -1.47
HDAC1-204ENST00000471488 RGS7BPQ6MZT1 257 aaPredicted RBP5.87□□□□□ -1.47
HDAC1-204ENST00000471488 DOK3Q7L591 496 aa5.87□□□□□ -1.47
HDAC1-204ENST00000471488 C6orf120Q7Z4R8 191 aa5.87□□□□□ -1.47
HDAC1-204ENST00000471488 MIER2Q8N344 545 aa5.87□□□□□ -1.47
HDAC1-204ENST00000471488 TMEM151AQ8N4L1 468 aa5.87□□□□□ -1.47
HDAC1-204ENST00000471488 SPATA4Q8NEY3 305 aa5.87□□□□□ -1.47
HDAC1-204ENST00000471488 IL17RDQ8NFM7 739 aa5.87□□□□□ -1.47
HDAC1-204ENST00000471488 DVL3Q92997 716 aaPredicted RBP5.87□□□□□ -1.47
HDAC1-204ENST00000471488 ZNF837Q96EG3 531 aaPredicted RBP5.87□□□□□ -1.47
HDAC1-204ENST00000471488 L3HYPDHQ96EM0 354 aa5.87□□□□□ -1.47
HDAC1-204ENST00000471488 C1orf147Q96MC9 270 aaPredicted RBP5.87□□□□□ -1.47
HDAC1-204ENST00000471488 TSPAN32Q96QS1 320 aa5.87□□□□□ -1.47
HDAC1-204ENST00000471488 DCLRE1CQ96SD1 692 aaKnown RBP5.87□□□□□ -1.47
HDAC1-204ENST00000471488 MRI1Q9BV20 369 aa5.87□□□□□ -1.47
HDAC1-204ENST00000471488 SF3B5Q9BWJ5 86 aaKnown RBP5.87□□□□□ -1.47
HDAC1-204ENST00000471488 DPY30Q9C005 99 aa5.87□□□□□ -1.47
HDAC1-204ENST00000471488 NELFAQ9H3P2 528 aa5.87□□□□□ -1.47
HDAC1-204ENST00000471488 GPR35Q9HC97 309 aa5.87□□□□□ -1.47
HDAC1-204ENST00000471488 HINT3Q9NQE9 182 aaKnown RBP5.87□□□□□ -1.47
HDAC1-204ENST00000471488 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.87□□□□□ -1.47
HDAC1-204ENST00000471488 TESQ9UGI8 421 aaKnown RBP5.87□□□□□ -1.47
HDAC1-204ENST00000471488 OPN4Q9UHM6 478 aa5.87□□□□□ -1.47
HDAC1-204ENST00000471488 GPR160Q9UJ42 338 aa5.87□□□□□ -1.47
HDAC1-204ENST00000471488 ZNF346Q9UL40 294 aaKnown RBP5.87□□□□□ -1.47
HDAC1-204ENST00000471488 SOX21Q9Y651 276 aaPredicted RBP5.87□□□□□ -1.47
HDAC1-204ENST00000471488 FAM181BA6NEQ2 426 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 ZNF208O43345 1280 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 HOXA3O43365 443 aaPredicted RBP5.86□□□□□ -1.47
HDAC1-204ENST00000471488 SPRY3O43610 288 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 TBX19O60806 448 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 DEAF1O75398 565 aaPredicted RBP5.86□□□□□ -1.47
HDAC1-204ENST00000471488 RP2O75695 350 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 SERPINI2O75830 405 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 CPSF4O95639 269 aaKnown RBP5.86□□□□□ -1.47
HDAC1-204ENST00000471488 AK1P00568 194 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 MT-ND5P03915 603 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 SBK2P0C263 348 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 VSIG8P0DPA2 414 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 NEFHP12036 1026 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 CCL2P13500 99 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 B4GALT1P15291 398 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 NCF2P19878 526 aaPredicted RBP5.86□□□□□ -1.47
HDAC1-204ENST00000471488 MAPK1P28482 360 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 GLRXP35754 106 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms