RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 B3GAT1Q9P2W7 334 aa7.31□□□□□ -1.24
NPHP3-204ENST00000469232 SLC6A5Q9Y345 797 aa7.31□□□□□ -1.24
NPHP3-204ENST00000469232 AQP7P3A6NL99 342 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 M0R082 166 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 BCKDKO14874 412 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 SEC14L5O43304 696 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 EIF1BO60739 113 aaKnown RBP7.3□□□□□ -1.24
NPHP3-204ENST00000469232 SOX14O95416 240 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 HMGN1P05114 100 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 CD14P08571 375 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 SAGP10523 405 aaPredicted RBP7.3□□□□□ -1.24
NPHP3-204ENST00000469232 ZNF24P17028 368 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 BMP7P18075 431 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 SLC6A6P31641 620 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 DIO1P49895 249 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 SMSP52788 366 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 CLDN20P56880 219 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 CXCR4P61073 352 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 SLC35A1P78382 337 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 PLGLB1Q02325 96 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 C19orf57Q0VDD7 668 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 GINS1Q14691 196 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 PDK3Q15120 406 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 TAF11Q15544 211 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 PGGHGQ32M88 737 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 ZIK1Q3SY52 487 aaPredicted RBP7.3□□□□□ -1.24
NPHP3-204ENST00000469232 TMEM176BQ3YBM2 270 aaPredicted RBP7.3□□□□□ -1.24
NPHP3-204ENST00000469232 PCSK4Q6UW60 755 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 Q6ZPB1 254 aaPredicted RBP7.3□□□□□ -1.24
NPHP3-204ENST00000469232 PXKQ7Z7A4 578 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 FAM26EQ8N5C1 309 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 PLPP7Q8NBV4 271 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 OR2T33Q8NG76 320 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 OR2V1Q8NHB1 315 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 ZNF417Q8TAU3 575 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 ZNF837Q96EG3 531 aaPredicted RBP7.3□□□□□ -1.24
NPHP3-204ENST00000469232 SAMD8Q96LT4 415 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 MUS81Q96NY9 551 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 ZNF587Q96SQ5 575 aaPredicted RBP7.3□□□□□ -1.24
NPHP3-204ENST00000469232 PRDM14Q9GZV8 571 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 SLC6A15Q9H2J7 730 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 RIBC2Q9H4K1 309 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 Q9H521 79 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 CHST11Q9NPF2 352 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 ZNF226Q9NYT6 803 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 UBAP1Q9NZ09 502 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 KLHL13Q9P2N7 655 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 SPRR3Q9UBC9 169 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 RPH3AQ9Y2J0 694 aaPredicted RBP7.3□□□□□ -1.24
NPHP3-204ENST00000469232 BSNQ9UPA5 3926 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 MED12Q93074 2177 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 KIAA1549Q9HCM3 1950 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 IGKV3D-15A0A087WSY6 115 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 TRAV27A0A087WT01 109 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 TRGV5A0A0B4J1U4 118 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 OR14I1A6ND48 311 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 FAM166BA8MTA8 275 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 H3BML4 177 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 SURF4O15260 269 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 MPZL2O60487 215 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 TRAPPC6AO75865 159 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 VAMP5O95183 116 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 CRYABP02511 175 aaKnown RBP7.3□□□□□ -1.24
NPHP3-204ENST00000469232 SFTPCP11686 197 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 CCNA2P20248 432 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 PTNP21246 168 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 RFC3P40938 356 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 AQP2P41181 271 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 TDGF1P3P51864 188 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 SUCLG1P53597 346 aaKnown RBP7.3□□□□□ -1.24
NPHP3-204ENST00000469232 SLC16A1P53985 500 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 CSNK2A1P68400 391 aaPredicted RBP7.3□□□□□ -1.24
NPHP3-204ENST00000469232 PMP22Q01453 160 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 RPL18Q07020 188 aaKnown RBP7.3□□□□□ -1.24
NPHP3-204ENST00000469232 MAD2L1BPQ15013 274 aaPredicted RBP7.3□□□□□ -1.24
NPHP3-204ENST00000469232 EMC4Q5J8M3 183 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 GPR139Q6DWJ6 353 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 ABLIM2Q6H8Q1 611 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 POMZP3Q6PJE2 187 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 NANOGNBQ7Z5D8 188 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 THAP5Q7Z6K1 395 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 ENTHD1Q8IYW4 607 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 DEPDC4Q8N2C3 294 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 SETD9Q8NE22 299 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 ZNF555Q8NEP9 628 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 OR8J1Q8NGP2 316 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 OR51A7Q8NH64 312 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 MOSPD2Q8NHP6 518 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 ZNF519Q8TB69 540 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 TEX47Q8TBZ9 253 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 FANK1Q8TC84 345 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 ABTB1Q969K4 478 aaPredicted RBP7.3□□□□□ -1.24
NPHP3-204ENST00000469232 ZNF566Q969W8 418 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 WDYHV1Q96HA8 205 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 CRELD1Q96HD1 420 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 OR5B2Q96R09 309 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 TIMP4Q99727 224 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 SLX1AQ9BQ83 275 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 SF3B5Q9BWJ5 86 aaKnown RBP7.3□□□□□ -1.24
NPHP3-204ENST00000469232 TSSK6Q9BXA6 273 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms