RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 A0A096LPE4 126 aa19.03■□□□□ 0.64
TTC28-204ENST00000468807 A0A1W2PPZ6 126 aa19.03■□□□□ 0.64
TTC28-204ENST00000468807 TPST1O60507 370 aa19.03■□□□□ 0.64
TTC28-204ENST00000468807 ATP4BP51164 291 aa19.03■□□□□ 0.64
TTC28-204ENST00000468807 TUBA1BP68363 451 aa19.03■□□□□ 0.64
TTC28-204ENST00000468807 TUBA4AP68366 448 aa19.03■□□□□ 0.64
TTC28-204ENST00000468807 DHRS4L2Q6PKH6 230 aa19.03■□□□□ 0.64
TTC28-204ENST00000468807 TUBA1AQ71U36 451 aa19.03■□□□□ 0.64
TTC28-204ENST00000468807 LINGO2Q7L985 606 aa19.03■□□□□ 0.64
TTC28-204ENST00000468807 COMTD1Q86VU5 262 aa19.03■□□□□ 0.64
TTC28-204ENST00000468807 SLC38A4Q969I6 547 aa19.03■□□□□ 0.64
TTC28-204ENST00000468807 TAAR8Q969N4 342 aa19.03■□□□□ 0.64
TTC28-204ENST00000468807 ZNF607Q96SK3 696 aa19.03■□□□□ 0.64
TTC28-204ENST00000468807 RSPO3Q9BXY4 272 aaPredicted RBP19.03■□□□□ 0.64
TTC28-204ENST00000468807 SLC52A3Q9NQ40 469 aa19.03■□□□□ 0.64
TTC28-204ENST00000468807 IGHV4-30-2A0A087WSY4 118 aa19.02■□□□□ 0.64
TTC28-204ENST00000468807 M0R082 166 aa19.02■□□□□ 0.64
TTC28-204ENST00000468807 AIM2O14862 343 aa19.02■□□□□ 0.64
TTC28-204ENST00000468807 OR2T1O43869 369 aa19.02■□□□□ 0.64
TTC28-204ENST00000468807 BMP4P12644 408 aa19.02■□□□□ 0.64
TTC28-204ENST00000468807 RGS8P57771 180 aaPredicted RBP19.02■□□□□ 0.64
TTC28-204ENST00000468807 ROR2Q01974 943 aaKnown RBP19.02■□□□□ 0.64
TTC28-204ENST00000468807 CHRNB3Q05901 458 aa19.02■□□□□ 0.64
TTC28-204ENST00000468807 C6orf89Q6UWU4 347 aa19.02■□□□□ 0.64
TTC28-204ENST00000468807 DNM1P46Q6ZS02 220 aa19.02■□□□□ 0.64
TTC28-204ENST00000468807 LSMEM1Q8N8F7 131 aa19.02■□□□□ 0.64
TTC28-204ENST00000468807 ZNF417Q8TAU3 575 aa19.02■□□□□ 0.64
TTC28-204ENST00000468807 DNAJA4Q8WW22 397 aaPredicted RBP19.02■□□□□ 0.64
TTC28-204ENST00000468807 ZNF587Q96SQ5 575 aaPredicted RBP19.02■□□□□ 0.64
TTC28-204ENST00000468807 RABEP2Q9H5N1 569 aa19.02■□□□□ 0.64
TTC28-204ENST00000468807 C12orf10Q9HB07 376 aa19.02■□□□□ 0.64
TTC28-204ENST00000468807 OBP2BQ9NPH6 170 aa19.02■□□□□ 0.64
TTC28-204ENST00000468807 TRBV5-3A0A0A0MS03 114 aa19.01■□□□□ 0.63
TTC28-204ENST00000468807 IGHV1-18A0A0C4DH31 117 aa19.01■□□□□ 0.63
TTC28-204ENST00000468807 PRORSD1PA6NEY8 169 aa19.01■□□□□ 0.63
TTC28-204ENST00000468807 KIAA1324LA8MWY0 1029 aaPredicted RBP19.01■□□□□ 0.63
TTC28-204ENST00000468807 SLC43A1O75387 559 aa19.01■□□□□ 0.63
TTC28-204ENST00000468807 SERPINB7O75635 380 aa19.01■□□□□ 0.63
TTC28-204ENST00000468807 GRPRP30550 384 aa19.01■□□□□ 0.63
TTC28-204ENST00000468807 APOBEC3AP31941 199 aaPredicted RBP19.01■□□□□ 0.63
TTC28-204ENST00000468807 C1QTNF12Q5T7M4 302 aa19.01■□□□□ 0.63
TTC28-204ENST00000468807 FAM69AQ5T7M9 428 aa19.01■□□□□ 0.63
TTC28-204ENST00000468807 ULK3Q6PHR2 472 aa19.01■□□□□ 0.63
TTC28-204ENST00000468807 ARMC8Q8IUR7 673 aa19.01■□□□□ 0.63
TTC28-204ENST00000468807 ZNF525Q8N782 197 aa19.01■□□□□ 0.63
TTC28-204ENST00000468807 FBXO17Q96EF6 278 aa19.01■□□□□ 0.63
TTC28-204ENST00000468807 OXGR1Q96P68 337 aa19.01■□□□□ 0.63
TTC28-204ENST00000468807 SLC38A2Q96QD8 506 aa19.01■□□□□ 0.63
TTC28-204ENST00000468807 TMEM27Q9HBJ8 222 aa19.01■□□□□ 0.63
TTC28-204ENST00000468807 YAE1D1Q9NRH1 226 aa19.01■□□□□ 0.63
TTC28-204ENST00000468807 TESQ9UGI8 421 aaKnown RBP19.01■□□□□ 0.63
TTC28-204ENST00000468807 LEF1Q9UJU2 399 aaPredicted RBP19.01■□□□□ 0.63
TTC28-204ENST00000468807 ANGPT4Q9Y264 503 aa19.01■□□□□ 0.63
TTC28-204ENST00000468807 PMF1-BGLAPU3KQ54 211 aa19.01■□□□□ 0.63
TTC28-204ENST00000468807 CHD3Q12873 2000 aaKnown RBP19.01■□□□□ 0.63
TTC28-204ENST00000468807 IGKV1D-42A0A075B6H8 117 aa19■□□□□ 0.63
TTC28-204ENST00000468807 TRAV36DV7A0A075B6V5 113 aa19■□□□□ 0.63
TTC28-204ENST00000468807 NQO1P15559 274 aaKnown RBP19■□□□□ 0.63
TTC28-204ENST00000468807 GPX2P18283 190 aa19■□□□□ 0.63
TTC28-204ENST00000468807 CYP51A1Q16850 503 aa19■□□□□ 0.63
TTC28-204ENST00000468807 C5orf46Q6UWT4 87 aa19■□□□□ 0.63
TTC28-204ENST00000468807 H1FNTQ75WM6 255 aaPredicted RBP19■□□□□ 0.63
TTC28-204ENST00000468807 GPR137CQ8N3F9 429 aa19■□□□□ 0.63
TTC28-204ENST00000468807 HIPK4Q8NE63 616 aa19■□□□□ 0.63
TTC28-204ENST00000468807 BCL2L2Q92843 193 aaPredicted RBP19■□□□□ 0.63
TTC28-204ENST00000468807 SLC47A1Q96FL8 570 aa19■□□□□ 0.63
TTC28-204ENST00000468807 CPPED1Q9BRF8 314 aaPredicted RBP19■□□□□ 0.63
TTC28-204ENST00000468807 LINC00470Q9BZP3 86 aa19■□□□□ 0.63
TTC28-204ENST00000468807 TMEM38AQ9H6F2 299 aa19■□□□□ 0.63
TTC28-204ENST00000468807 RCE1Q9Y256 329 aa19■□□□□ 0.63
TTC28-204ENST00000468807 HMGB1P1B2RPK0 211 aaPredicted RBP18.99■□□□□ 0.63
TTC28-204ENST00000468807 H7C417 338 aa18.99■□□□□ 0.63
TTC28-204ENST00000468807 CRYAAP02489 173 aa18.99■□□□□ 0.63
TTC28-204ENST00000468807 DSCR9P59020 149 aa18.99■□□□□ 0.63
TTC28-204ENST00000468807 OR1Q1Q15612 314 aa18.99■□□□□ 0.63
TTC28-204ENST00000468807 ADRM1Q16186 407 aa18.99■□□□□ 0.63
TTC28-204ENST00000468807 FAM91A1Q658Y4 838 aa18.99■□□□□ 0.63
TTC28-204ENST00000468807 ANKRD16Q6P6B7 361 aa18.99■□□□□ 0.63
TTC28-204ENST00000468807 DLEU7Q6UYE1 221 aa18.99■□□□□ 0.63
TTC28-204ENST00000468807 HDXQ7Z353 690 aa18.99■□□□□ 0.63
TTC28-204ENST00000468807 DHDDSQ86SQ9 333 aa18.99■□□□□ 0.63
TTC28-204ENST00000468807 RANBP3LQ86VV4 465 aaPredicted RBP18.99■□□□□ 0.63
TTC28-204ENST00000468807 C10orf53Q8N6V4 93 aa18.99■□□□□ 0.63
TTC28-204ENST00000468807 SMYD1Q8NB12 490 aa18.99■□□□□ 0.63
TTC28-204ENST00000468807 MAGEB18Q96M61 343 aa18.99■□□□□ 0.63
TTC28-204ENST00000468807 KLHL14Q9P2G3 628 aa18.99■□□□□ 0.63
TTC28-204ENST00000468807 B3GAT1Q9P2W7 334 aa18.99■□□□□ 0.63
TTC28-204ENST00000468807 NDUFAF1Q9Y375 327 aa18.99■□□□□ 0.63
TTC28-204ENST00000468807 ANGPT2O15123 496 aa18.98■□□□□ 0.63
TTC28-204ENST00000468807 AKAP8O43823 692 aaKnown RBP18.98■□□□□ 0.63
TTC28-204ENST00000468807 CD5LO43866 347 aa18.98■□□□□ 0.63
TTC28-204ENST00000468807 CRLF1O75462 422 aa18.98■□□□□ 0.63
TTC28-204ENST00000468807 SH3BGRP55822 239 aaPredicted RBP18.98■□□□□ 0.63
TTC28-204ENST00000468807 MTPNP58546 118 aa18.98■□□□□ 0.63
TTC28-204ENST00000468807 ARF1P84077 181 aaKnown RBP18.98■□□□□ 0.63
TTC28-204ENST00000468807 RUNDC3AQ59EK9 446 aa18.98■□□□□ 0.63
TTC28-204ENST00000468807 CARD17Q5XLA6 110 aa18.98■□□□□ 0.63
TTC28-204ENST00000468807 VHLLQ6RSH7 139 aa18.98■□□□□ 0.63
TTC28-204ENST00000468807 NET1Q7Z628 596 aaPredicted RBP18.98■□□□□ 0.63
TTC28-204ENST00000468807 UEVLDQ8IX04 471 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms