RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 CCDC22O60826 627 aa10.13□□□□□ -0.79
CDHR3-205ENST00000468143 LYPD3O95274 346 aa10.13□□□□□ -0.79
CDHR3-205ENST00000468143 HPRP00739 348 aa10.13□□□□□ -0.79
CDHR3-205ENST00000468143 BGLAPP02818 100 aa10.13□□□□□ -0.79
CDHR3-205ENST00000468143 COX4I1P13073 169 aa10.13□□□□□ -0.79
CDHR3-205ENST00000468143 HLA-DOBP13765 273 aa10.13□□□□□ -0.79
CDHR3-205ENST00000468143 MPGP29372 298 aa10.13□□□□□ -0.79
CDHR3-205ENST00000468143 RIPPLY3P57055 190 aa10.13□□□□□ -0.79
CDHR3-205ENST00000468143 SLC25A3Q00325 362 aa10.13□□□□□ -0.79
CDHR3-205ENST00000468143 SPOCK1Q08629 439 aa10.13□□□□□ -0.79
CDHR3-205ENST00000468143 ZNF672Q499Z4 452 aaPredicted RBP10.13□□□□□ -0.79
CDHR3-205ENST00000468143 HIKESHIQ53FT3 197 aa10.13□□□□□ -0.79
CDHR3-205ENST00000468143 OR7E24Q6IFN5 339 aa10.13□□□□□ -0.79
CDHR3-205ENST00000468143 ZNF613Q6PF04 617 aa10.13□□□□□ -0.79
CDHR3-205ENST00000468143 C5orf46Q6UWT4 87 aa10.13□□□□□ -0.79
CDHR3-205ENST00000468143 LINC00114Q6XXX2 140 aa10.13□□□□□ -0.79
CDHR3-205ENST00000468143 LINGO2Q7L985 606 aa10.13□□□□□ -0.79
CDHR3-205ENST00000468143 SPATA21Q7Z572 469 aa10.13□□□□□ -0.79
CDHR3-205ENST00000468143 CARM1Q86X55 608 aa10.13□□□□□ -0.79
CDHR3-205ENST00000468143 TREML1Q86YW5 311 aa10.13□□□□□ -0.79
CDHR3-205ENST00000468143 POMGNT2Q8NAT1 580 aa10.13□□□□□ -0.79
CDHR3-205ENST00000468143 RP9Q8TA86 221 aaKnown RBP10.13□□□□□ -0.79
CDHR3-205ENST00000468143 ADAMTS16Q8TE57 1224 aa10.13□□□□□ -0.79
CDHR3-205ENST00000468143 TMEM171Q8WVE6 324 aa10.13□□□□□ -0.79
CDHR3-205ENST00000468143 PROX1Q92786 737 aa10.13□□□□□ -0.79
CDHR3-205ENST00000468143 ALKBH3Q96Q83 286 aaPredicted RBP10.13□□□□□ -0.79
CDHR3-205ENST00000468143 EPYCQ99645 322 aa10.13□□□□□ -0.79
CDHR3-205ENST00000468143 PIP5K1AQ99755 562 aa10.13□□□□□ -0.79
CDHR3-205ENST00000468143 SLC17A5Q9NRA2 495 aa10.13□□□□□ -0.79
CDHR3-205ENST00000468143 CMTM6Q9NX76 183 aa10.13□□□□□ -0.79
CDHR3-205ENST00000468143 CISD1Q9NZ45 108 aaKnown RBP10.13□□□□□ -0.79
CDHR3-205ENST00000468143 SLC7A7Q9UM01 511 aa10.13□□□□□ -0.79
CDHR3-205ENST00000468143 B3GALT5Q9Y2C3 310 aa10.13□□□□□ -0.79
CDHR3-205ENST00000468143 ANKRD17O75179 2603 aaKnown RBP10.12□□□□□ -0.79
CDHR3-205ENST00000468143 TACC2O95359 2948 aa10.12□□□□□ -0.79
CDHR3-205ENST00000468143 A0A096LPE4 126 aa10.12□□□□□ -0.79
CDHR3-205ENST00000468143 A0A1W2PPZ6 126 aa10.12□□□□□ -0.79
CDHR3-205ENST00000468143 SHISA9B4DS77 424 aa10.12□□□□□ -0.79
CDHR3-205ENST00000468143 KPNA4O00629 521 aaPredicted RBP10.12□□□□□ -0.79
CDHR3-205ENST00000468143 SLC22A2O15244 555 aa10.12□□□□□ -0.79
CDHR3-205ENST00000468143 ARHGEF9O43307 516 aa10.12□□□□□ -0.79
CDHR3-205ENST00000468143 CHP2O43745 196 aa10.12□□□□□ -0.79
CDHR3-205ENST00000468143 FMO6PO60774 539 aa10.12□□□□□ -0.79
CDHR3-205ENST00000468143 SERPINI2O75830 405 aa10.12□□□□□ -0.79
CDHR3-205ENST00000468143 SOD3P08294 240 aa10.12□□□□□ -0.79
CDHR3-205ENST00000468143 AHCYP23526 432 aa10.12□□□□□ -0.79
CDHR3-205ENST00000468143 OR1E2P47887 323 aa10.12□□□□□ -0.79
CDHR3-205ENST00000468143 PTH2RP49190 550 aa10.12□□□□□ -0.79
CDHR3-205ENST00000468143 TGFBR3Q03167 851 aa10.12□□□□□ -0.79
CDHR3-205ENST00000468143 PMS2P3Q13401 168 aa10.12□□□□□ -0.79
CDHR3-205ENST00000468143 VEZF1Q14119 521 aa10.12□□□□□ -0.79
CDHR3-205ENST00000468143 LRRC23Q53EV4 343 aaPredicted RBP10.12□□□□□ -0.79
CDHR3-205ENST00000468143 Q5PR19 223 aa10.12□□□□□ -0.79
CDHR3-205ENST00000468143 SHEQ5VZ18 495 aa10.12□□□□□ -0.79
CDHR3-205ENST00000468143 CARD17Q5XLA6 110 aa10.12□□□□□ -0.79
CDHR3-205ENST00000468143 ERICH5Q6P6B1 374 aa10.12□□□□□ -0.79
CDHR3-205ENST00000468143 TTC33Q6PID6 262 aaPredicted RBP10.12□□□□□ -0.79
CDHR3-205ENST00000468143 SLC22A25Q6T423 547 aa10.12□□□□□ -0.79
CDHR3-205ENST00000468143 LRRC75A-AS1Q8N1F1 130 aa10.12□□□□□ -0.79
CDHR3-205ENST00000468143 OR2T12Q8NG77 320 aa10.12□□□□□ -0.79
CDHR3-205ENST00000468143 SMAP2Q8WU79 429 aaPredicted RBP10.12□□□□□ -0.79
CDHR3-205ENST00000468143 FBXW5Q969U6 566 aa10.12□□□□□ -0.79
CDHR3-205ENST00000468143 TXNDC15Q96J42 360 aa10.12□□□□□ -0.79
CDHR3-205ENST00000468143 TPD52L3Q96J77 140 aa10.12□□□□□ -0.79
CDHR3-205ENST00000468143 TMEM43Q9BTV4 400 aa10.12□□□□□ -0.79
CDHR3-205ENST00000468143 EMC6Q9BV81 110 aa10.12□□□□□ -0.79
CDHR3-205ENST00000468143 ASPNQ9BXN1 380 aa10.12□□□□□ -0.79
CDHR3-205ENST00000468143 AMBRA1Q9C0C7 1298 aa10.12□□□□□ -0.79
CDHR3-205ENST00000468143 GSX1Q9H4S2 264 aaPredicted RBP10.12□□□□□ -0.79
CDHR3-205ENST00000468143 AKAP6Q13023 2319 aa10.11□□□□□ -0.79
CDHR3-205ENST00000468143 FREM1Q5H8C1 2179 aa10.11□□□□□ -0.79
CDHR3-205ENST00000468143 TRAPPC13A5PLN9 417 aa10.11□□□□□ -0.79
CDHR3-205ENST00000468143 FAM220BPB1ANY3 271 aa10.11□□□□□ -0.79
CDHR3-205ENST00000468143 ZNF587BE7ETH6 402 aa10.11□□□□□ -0.79
CDHR3-205ENST00000468143 C11orf98E9PRG8 122 aa10.11□□□□□ -0.79
CDHR3-205ENST00000468143 M0R3G1 203 aa10.11□□□□□ -0.79
CDHR3-205ENST00000468143 PLPP3O14495 311 aa10.11□□□□□ -0.79
CDHR3-205ENST00000468143 SLC43A1O75387 559 aa10.11□□□□□ -0.79
CDHR3-205ENST00000468143 ZNF432O94892 652 aa10.11□□□□□ -0.79
CDHR3-205ENST00000468143 CH25HO95992 272 aa10.11□□□□□ -0.79
CDHR3-205ENST00000468143 CD40P25942 277 aa10.11□□□□□ -0.79
CDHR3-205ENST00000468143 KDELR2P33947 212 aa10.11□□□□□ -0.79
CDHR3-205ENST00000468143 CDKN1AP38936 164 aa10.11□□□□□ -0.79
CDHR3-205ENST00000468143 PRPS1P60891 318 aa10.11□□□□□ -0.79
CDHR3-205ENST00000468143 TUBA1BP68363 451 aa10.11□□□□□ -0.79
CDHR3-205ENST00000468143 TUBA4AP68366 448 aa10.11□□□□□ -0.79
CDHR3-205ENST00000468143 ROR2Q01974 943 aaKnown RBP10.11□□□□□ -0.79
CDHR3-205ENST00000468143 POU3F1Q03052 451 aaPredicted RBP10.11□□□□□ -0.79
CDHR3-205ENST00000468143 LIPEQ05469 1076 aa10.11□□□□□ -0.79
CDHR3-205ENST00000468143 PGGHGQ32M88 737 aa10.11□□□□□ -0.79
CDHR3-205ENST00000468143 TBRG1Q3YBR2 411 aa10.11□□□□□ -0.79
CDHR3-205ENST00000468143 CYBRD1Q53TN4 286 aa10.11□□□□□ -0.79
CDHR3-205ENST00000468143 PHYHD1Q5SRE7 291 aa10.11□□□□□ -0.79
CDHR3-205ENST00000468143 SWT1Q5T5J6 900 aaKnown RBP10.11□□□□□ -0.79
CDHR3-205ENST00000468143 HMBOX1Q6NT76 420 aa10.11□□□□□ -0.79
CDHR3-205ENST00000468143 KLHL17Q6TDP4 642 aa10.11□□□□□ -0.79
CDHR3-205ENST00000468143 TMEM108Q6UXF1 575 aa10.11□□□□□ -0.79
CDHR3-205ENST00000468143 DEF8Q6ZN54 512 aa10.11□□□□□ -0.79
CDHR3-205ENST00000468143 TUBA1AQ71U36 451 aa10.11□□□□□ -0.79
CDHR3-205ENST00000468143 ABHD12BQ7Z5M8 362 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms