RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 FZD7O75084 574 aa16.74■□□□□ 0.27
COL7A1-207ENST00000467985 DCTN3O75935 186 aa16.74■□□□□ 0.27
COL7A1-207ENST00000467985 PAX7P23759 505 aa16.74■□□□□ 0.27
COL7A1-207ENST00000467985 RPS5P46782 204 aaKnown RBP16.74■□□□□ 0.27
COL7A1-207ENST00000467985 PRPS1P60891 318 aa16.74■□□□□ 0.27
COL7A1-207ENST00000467985 EGR4Q05215 589 aa16.74■□□□□ 0.27
COL7A1-207ENST00000467985 FAM69AQ5T7M9 428 aa16.74■□□□□ 0.27
COL7A1-207ENST00000467985 NET1Q7Z628 596 aaPredicted RBP16.74■□□□□ 0.27
COL7A1-207ENST00000467985 WDR31Q8NA23 367 aa16.74■□□□□ 0.27
COL7A1-207ENST00000467985 C11orf65Q8NCR3 313 aa16.74■□□□□ 0.27
COL7A1-207ENST00000467985 KTI12Q96EK9 354 aaPredicted RBP16.74■□□□□ 0.27
COL7A1-207ENST00000467985 SLC47A1Q96FL8 570 aa16.74■□□□□ 0.27
COL7A1-207ENST00000467985 ANKRD27Q96NW4 1050 aa16.74■□□□□ 0.27
COL7A1-207ENST00000467985 TRAF4Q9BUZ4 470 aaPredicted RBP16.74■□□□□ 0.27
COL7A1-207ENST00000467985 PTDSS2Q9BVG9 487 aa16.74■□□□□ 0.27
COL7A1-207ENST00000467985 ZNF385DQ9H6B1 395 aa16.74■□□□□ 0.27
COL7A1-207ENST00000467985 TMEM27Q9HBJ8 222 aa16.74■□□□□ 0.27
COL7A1-207ENST00000467985 HIVEP2P31629 2446 aa16.73■□□□□ 0.27
COL7A1-207ENST00000467985 TRAV36DV7A0A075B6V5 113 aa16.73■□□□□ 0.27
COL7A1-207ENST00000467985 A0A1W2PR80 420 aa16.73■□□□□ 0.27
COL7A1-207ENST00000467985 M0R1B8 84 aa16.73■□□□□ 0.27
COL7A1-207ENST00000467985 AIM2O14862 343 aa16.73■□□□□ 0.27
COL7A1-207ENST00000467985 LY6G6DO95868 133 aa16.73■□□□□ 0.27
COL7A1-207ENST00000467985 HTR2AP28223 471 aa16.73■□□□□ 0.27
COL7A1-207ENST00000467985 RGS8P57771 180 aaPredicted RBP16.73■□□□□ 0.27
COL7A1-207ENST00000467985 MFSD13AQ14CX5 517 aa16.73■□□□□ 0.27
COL7A1-207ENST00000467985 CYP51A1Q16850 503 aa16.73■□□□□ 0.27
COL7A1-207ENST00000467985 ALG10BQ5I7T1 473 aa16.73■□□□□ 0.27
COL7A1-207ENST00000467985 RANBP3LQ86VV4 465 aaPredicted RBP16.73■□□□□ 0.27
COL7A1-207ENST00000467985 SLC30A8Q8IWU4 369 aa16.73■□□□□ 0.27
COL7A1-207ENST00000467985 CGREF1Q99674 301 aa16.73■□□□□ 0.27
COL7A1-207ENST00000467985 DHRS9Q9BPW9 319 aa16.73■□□□□ 0.27
COL7A1-207ENST00000467985 FKRPQ9H9S5 495 aa16.73■□□□□ 0.27
COL7A1-207ENST00000467985 BARX1Q9HBU1 254 aaPredicted RBP16.73■□□□□ 0.27
COL7A1-207ENST00000467985 RCE1Q9Y256 329 aa16.73■□□□□ 0.27
COL7A1-207ENST00000467985 B3GALT5Q9Y2C3 310 aa16.73■□□□□ 0.27
COL7A1-207ENST00000467985 CAPN7Q9Y6W3 813 aa16.73■□□□□ 0.27
COL7A1-207ENST00000467985 CSPG4Q6UVK1 2322 aa16.73■□□□□ 0.27
COL7A1-207ENST00000467985 TPST1O60507 370 aa16.72■□□□□ 0.27
COL7A1-207ENST00000467985 CD8AP01732 235 aa16.72■□□□□ 0.27
COL7A1-207ENST00000467985 ZNF43P17038 809 aa16.72■□□□□ 0.27
COL7A1-207ENST00000467985 CDKN1AP38936 164 aa16.72■□□□□ 0.27
COL7A1-207ENST00000467985 SELENOPP49908 381 aa16.72■□□□□ 0.27
COL7A1-207ENST00000467985 CLEC12BQ2HXU8 276 aa16.72■□□□□ 0.27
COL7A1-207ENST00000467985 SWT1Q5T5J6 900 aaKnown RBP16.72■□□□□ 0.27
COL7A1-207ENST00000467985 NIPAL3Q6P499 406 aa16.72■□□□□ 0.27
COL7A1-207ENST00000467985 Q71RC1 249 aaPredicted RBP16.72■□□□□ 0.27
COL7A1-207ENST00000467985 LSRQ86X29 649 aaPredicted RBP16.72■□□□□ 0.27
COL7A1-207ENST00000467985 EPHX4Q8IUS5 362 aa16.72■□□□□ 0.27
COL7A1-207ENST00000467985 ANKK1Q8NFD2 765 aa16.72■□□□□ 0.27
COL7A1-207ENST00000467985 OR6S1Q8NH40 331 aa16.72■□□□□ 0.27
COL7A1-207ENST00000467985 TAAR8Q969N4 342 aa16.72■□□□□ 0.27
COL7A1-207ENST00000467985 HS6ST2Q96MM7 605 aa16.72■□□□□ 0.27
COL7A1-207ENST00000467985 OXGR1Q96P68 337 aa16.72■□□□□ 0.27
COL7A1-207ENST00000467985 EPYCQ99645 322 aa16.72■□□□□ 0.27
COL7A1-207ENST00000467985 RSPO3Q9BXY4 272 aaPredicted RBP16.72■□□□□ 0.27
COL7A1-207ENST00000467985 LINC00470Q9BZP3 86 aa16.72■□□□□ 0.27
COL7A1-207ENST00000467985 MOV10Q9HCE1 1003 aaKnown RBP16.72■□□□□ 0.27
COL7A1-207ENST00000467985 SAR1AQ9NR31 198 aa16.72■□□□□ 0.27
COL7A1-207ENST00000467985 ABCA2Q9BZC7 2435 aa16.71■□□□□ 0.27
COL7A1-207ENST00000467985 LOC102725191A0A1B0GVB3 256 aa16.71■□□□□ 0.27
COL7A1-207ENST00000467985 MFN2O95140 757 aa16.71■□□□□ 0.27
COL7A1-207ENST00000467985 C8BP07358 591 aa16.71■□□□□ 0.27
COL7A1-207ENST00000467985 CDH2P19022 906 aaPredicted RBP16.71■□□□□ 0.27
COL7A1-207ENST00000467985 AQP1P29972 269 aa16.71■□□□□ 0.27
COL7A1-207ENST00000467985 TTKP33981 857 aa16.71■□□□□ 0.27
COL7A1-207ENST00000467985 SH3BGRP55822 239 aaPredicted RBP16.71■□□□□ 0.27
COL7A1-207ENST00000467985 PCBP3P57721 371 aaKnown RBP16.71■□□□□ 0.27
COL7A1-207ENST00000467985 C1DQ13901 141 aaKnown RBP16.71■□□□□ 0.27
COL7A1-207ENST00000467985 NFYCQ13952 458 aa16.71■□□□□ 0.27
COL7A1-207ENST00000467985 MAPRE2Q15555 327 aa16.71■□□□□ 0.27
COL7A1-207ENST00000467985 NRF1Q16656 503 aa16.71■□□□□ 0.27
COL7A1-207ENST00000467985 GLIPR1L2Q4G1C9 344 aa16.71■□□□□ 0.27
COL7A1-207ENST00000467985 ZNF544Q6NX49 715 aa16.71■□□□□ 0.27
COL7A1-207ENST00000467985 H1FNTQ75WM6 255 aaPredicted RBP16.71■□□□□ 0.27
COL7A1-207ENST00000467985 COMTD1Q86VU5 262 aa16.71■□□□□ 0.27
COL7A1-207ENST00000467985 PTOV1Q86YD1 416 aa16.71■□□□□ 0.27
COL7A1-207ENST00000467985 FBXL14Q8N1E6 418 aa16.71■□□□□ 0.27
COL7A1-207ENST00000467985 ADPRHL1Q8NDY3 354 aa16.71■□□□□ 0.27
COL7A1-207ENST00000467985 LRRC37BQ96QE4 947 aa16.71■□□□□ 0.27
COL7A1-207ENST00000467985 C1QTNF6Q9BXI9 259 aa16.71■□□□□ 0.27
COL7A1-207ENST00000467985 ARMCX1Q9P291 453 aa16.71■□□□□ 0.27
COL7A1-207ENST00000467985 CORINQ9Y5Q5 1042 aa16.71■□□□□ 0.27
COL7A1-207ENST00000467985 A0A087WUJ7 227 aa16.7■□□□□ 0.26
COL7A1-207ENST00000467985 A0A0B4J2E0 115 aa16.7■□□□□ 0.26
COL7A1-207ENST00000467985 A0A1B0GX12 115 aa16.7■□□□□ 0.26
COL7A1-207ENST00000467985 E7EQL1 145 aa16.7■□□□□ 0.26
COL7A1-207ENST00000467985 M0R082 166 aa16.7■□□□□ 0.26
COL7A1-207ENST00000467985 AKAP8O43823 692 aaKnown RBP16.7■□□□□ 0.26
COL7A1-207ENST00000467985 FMO6PO60774 539 aa16.7■□□□□ 0.26
COL7A1-207ENST00000467985 FABP6P51161 128 aa16.7■□□□□ 0.26
COL7A1-207ENST00000467985 SLC25A3Q00325 362 aa16.7■□□□□ 0.26
COL7A1-207ENST00000467985 SPOCK1Q08629 439 aa16.7■□□□□ 0.26
COL7A1-207ENST00000467985 TNK1Q13470 666 aa16.7■□□□□ 0.26
COL7A1-207ENST00000467985 VEZF1Q14119 521 aa16.7■□□□□ 0.26
COL7A1-207ENST00000467985 OR1Q1Q15612 314 aa16.7■□□□□ 0.26
COL7A1-207ENST00000467985 HIKESHIQ53FT3 197 aa16.7■□□□□ 0.26
COL7A1-207ENST00000467985 HMBOX1Q6NT76 420 aa16.7■□□□□ 0.26
COL7A1-207ENST00000467985 RETREG3Q86VR2 466 aa16.7■□□□□ 0.26
COL7A1-207ENST00000467985 MUC15Q8N387 334 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms