RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 CBLP22681 906 aa12.87□□□□□ -0.35
ATPAF2-204ENST00000467560 PRKAR1BP31321 381 aa12.87□□□□□ -0.35
ATPAF2-204ENST00000467560 CDK6Q00534 326 aa12.87□□□□□ -0.35
ATPAF2-204ENST00000467560 NRF1Q16656 503 aa12.87□□□□□ -0.35
ATPAF2-204ENST00000467560 GCNT6Q5T4J0 391 aa12.87□□□□□ -0.35
ATPAF2-204ENST00000467560 C6orf89Q6UWU4 347 aa12.87□□□□□ -0.35
ATPAF2-204ENST00000467560 MYPOPQ86VE0 399 aaPredicted RBP12.87□□□□□ -0.35
ATPAF2-204ENST00000467560 LRRC8CQ8TDW0 803 aa12.87□□□□□ -0.35
ATPAF2-204ENST00000467560 ADAD1Q96M93 576 aaKnown RBP12.87□□□□□ -0.35
ATPAF2-204ENST00000467560 CCDC28BQ9BUN5 200 aa12.87□□□□□ -0.35
ATPAF2-204ENST00000467560 TMEM45AQ9NWC5 275 aa12.87□□□□□ -0.35
ATPAF2-204ENST00000467560 PRDM4Q9UKN5 801 aa12.87□□□□□ -0.35
ATPAF2-204ENST00000467560 RASD1Q9Y272 281 aa12.87□□□□□ -0.35
ATPAF2-204ENST00000467560 ARFGEF3Q5TH69 2177 aa12.86□□□□□ -0.35
ATPAF2-204ENST00000467560 ELOA3DA6NLF2 546 aaPredicted RBP12.86□□□□□ -0.35
ATPAF2-204ENST00000467560 C5orf58C9J3I9 102 aa12.86□□□□□ -0.35
ATPAF2-204ENST00000467560 ZNF587BE7ETH6 402 aa12.86□□□□□ -0.35
ATPAF2-204ENST00000467560 M0R082 166 aa12.86□□□□□ -0.35
ATPAF2-204ENST00000467560 KRT33AO76009 404 aa12.86□□□□□ -0.35
ATPAF2-204ENST00000467560 HPRP00739 348 aa12.86□□□□□ -0.35
ATPAF2-204ENST00000467560 AQP1P29972 269 aa12.86□□□□□ -0.35
ATPAF2-204ENST00000467560 CALCRP30988 508 aa12.86□□□□□ -0.35
ATPAF2-204ENST00000467560 CLDN17P56750 224 aa12.86□□□□□ -0.35
ATPAF2-204ENST00000467560 STX1BP61266 288 aa12.86□□□□□ -0.35
ATPAF2-204ENST00000467560 RAB35Q15286 201 aa12.86□□□□□ -0.35
ATPAF2-204ENST00000467560 SWI5Q1ZZU3 235 aa12.86□□□□□ -0.35
ATPAF2-204ENST00000467560 ELOA3BQ3SY89 546 aa12.86□□□□□ -0.35
ATPAF2-204ENST00000467560 AGKQ53H12 422 aa12.86□□□□□ -0.35
ATPAF2-204ENST00000467560 PHYHD1Q5SRE7 291 aa12.86□□□□□ -0.35
ATPAF2-204ENST00000467560 DHRS4L2Q6PKH6 230 aa12.86□□□□□ -0.35
ATPAF2-204ENST00000467560 DLEU7Q6UYE1 221 aa12.86□□□□□ -0.35
ATPAF2-204ENST00000467560 DEPDC4Q8N2C3 294 aa12.86□□□□□ -0.35
ATPAF2-204ENST00000467560 LSMEM1Q8N8F7 131 aa12.86□□□□□ -0.35
ATPAF2-204ENST00000467560 ELOA3Q8NG57 546 aa12.86□□□□□ -0.35
ATPAF2-204ENST00000467560 ZNF417Q8TAU3 575 aa12.86□□□□□ -0.35
ATPAF2-204ENST00000467560 SLC35B4Q969S0 331 aa12.86□□□□□ -0.35
ATPAF2-204ENST00000467560 THOC1Q96FV9 657 aaKnown RBP12.86□□□□□ -0.35
ATPAF2-204ENST00000467560 ZNF587Q96SQ5 575 aaPredicted RBP12.86□□□□□ -0.35
ATPAF2-204ENST00000467560 RHNO1Q9BSD3 238 aa12.86□□□□□ -0.35
ATPAF2-204ENST00000467560 RAD21L1Q9H4I0 556 aa12.86□□□□□ -0.35
ATPAF2-204ENST00000467560 ARMC7Q9H6L4 198 aa12.86□□□□□ -0.35
ATPAF2-204ENST00000467560 FKRPQ9H9S5 495 aa12.86□□□□□ -0.35
ATPAF2-204ENST00000467560 YAE1D1Q9NRH1 226 aa12.86□□□□□ -0.35
ATPAF2-204ENST00000467560 INTS9Q9NV88 658 aaKnown RBP12.86□□□□□ -0.35
ATPAF2-204ENST00000467560 GMEB1Q9Y692 573 aa12.86□□□□□ -0.35
ATPAF2-204ENST00000467560 CHD3Q12873 2000 aaKnown RBP12.86□□□□□ -0.35
ATPAF2-204ENST00000467560 WNT11O96014 354 aa12.85□□□□□ -0.35
ATPAF2-204ENST00000467560 CELA3BP08861 270 aa12.85□□□□□ -0.35
ATPAF2-204ENST00000467560 HLA-DOBP13765 273 aa12.85□□□□□ -0.35
ATPAF2-204ENST00000467560 GRPRP30550 384 aa12.85□□□□□ -0.35
ATPAF2-204ENST00000467560 APOBEC3AP31941 199 aaPredicted RBP12.85□□□□□ -0.35
ATPAF2-204ENST00000467560 ARF1P84077 181 aaKnown RBP12.85□□□□□ -0.35
ATPAF2-204ENST00000467560 ROR2Q01974 943 aaKnown RBP12.85□□□□□ -0.35
ATPAF2-204ENST00000467560 SELPLGQ14242 412 aa12.85□□□□□ -0.35
ATPAF2-204ENST00000467560 REEP3Q6NUK4 255 aa12.85□□□□□ -0.35
ATPAF2-204ENST00000467560 FBXO17Q96EF6 278 aa12.85□□□□□ -0.35
ATPAF2-204ENST00000467560 SLC38A2Q96QD8 506 aa12.85□□□□□ -0.35
ATPAF2-204ENST00000467560 CPPED1Q9BRF8 314 aaPredicted RBP12.85□□□□□ -0.35
ATPAF2-204ENST00000467560 CACYBPQ9HB71 228 aaKnown RBP12.85□□□□□ -0.35
ATPAF2-204ENST00000467560 KLHL14Q9P2G3 628 aa12.85□□□□□ -0.35
ATPAF2-204ENST00000467560 RTTNQ86VV8 2226 aa12.85□□□□□ -0.35
ATPAF2-204ENST00000467560 ARPC4-TTLL3A0A0A6YYG9 625 aa12.84□□□□□ -0.35
ATPAF2-204ENST00000467560 LRRN3E7EW58 273 aa12.84□□□□□ -0.35
ATPAF2-204ENST00000467560 MS4A18H0YCH9 400 aa12.84□□□□□ -0.35
ATPAF2-204ENST00000467560 TRAF3IP2O43734 574 aaPredicted RBP12.84□□□□□ -0.35
ATPAF2-204ENST00000467560 TP53P04637 393 aaPredicted RBP12.84□□□□□ -0.35
ATPAF2-204ENST00000467560 CECR9P0C854 216 aa12.84□□□□□ -0.35
ATPAF2-204ENST00000467560 GPX2P18283 190 aa12.84□□□□□ -0.35
ATPAF2-204ENST00000467560 SCARB2Q14108 478 aa12.84□□□□□ -0.35
ATPAF2-204ENST00000467560 TMEM249Q2WGJ8 235 aa12.84□□□□□ -0.35
ATPAF2-204ENST00000467560 MS4A18Q3C1V0 323 aa12.84□□□□□ -0.35
ATPAF2-204ENST00000467560 ALG10BQ5I7T1 473 aa12.84□□□□□ -0.35
ATPAF2-204ENST00000467560 ANKRD16Q6P6B7 361 aa12.84□□□□□ -0.35
ATPAF2-204ENST00000467560 KLHL24Q6TFL4 600 aa12.84□□□□□ -0.35
ATPAF2-204ENST00000467560 CLEC2AQ6UVW9 174 aa12.84□□□□□ -0.35
ATPAF2-204ENST00000467560 NHLRC1Q6VVB1 395 aa12.84□□□□□ -0.35
ATPAF2-204ENST00000467560 RETREG3Q86VR2 466 aa12.84□□□□□ -0.35
ATPAF2-204ENST00000467560 PTOV1Q86YD1 416 aa12.84□□□□□ -0.35
ATPAF2-204ENST00000467560 TMEM123Q8N131 208 aa12.84□□□□□ -0.35
ATPAF2-204ENST00000467560 C10orf105Q8TEF2 133 aa12.84□□□□□ -0.35
ATPAF2-204ENST00000467560 OXGR1Q96P68 337 aa12.84□□□□□ -0.35
ATPAF2-204ENST00000467560 SORCS2Q96PQ0 1159 aa12.84□□□□□ -0.35
ATPAF2-204ENST00000467560 OR2M2Q96R28 347 aa12.84□□□□□ -0.35
ATPAF2-204ENST00000467560 LINC00470Q9BZP3 86 aa12.84□□□□□ -0.35
ATPAF2-204ENST00000467560 TMEM38AQ9H6F2 299 aa12.84□□□□□ -0.35
ATPAF2-204ENST00000467560 C12orf10Q9HB07 376 aa12.84□□□□□ -0.35
ATPAF2-204ENST00000467560 GPR35Q9HC97 309 aa12.84□□□□□ -0.35
ATPAF2-204ENST00000467560 CRNNQ9UBG3 495 aaPredicted RBP12.84□□□□□ -0.35
ATPAF2-204ENST00000467560 RPS6KB2Q9UBS0 482 aa12.84□□□□□ -0.35
ATPAF2-204ENST00000467560 TRAV36DV7A0A075B6V5 113 aa12.83□□□□□ -0.36
ATPAF2-204ENST00000467560 A0A0B4J2E0 115 aa12.83□□□□□ -0.36
ATPAF2-204ENST00000467560 A0A1B0GX12 115 aa12.83□□□□□ -0.36
ATPAF2-204ENST00000467560 RPL36A-HNRNPH2H7BZ11 118 aa12.83□□□□□ -0.36
ATPAF2-204ENST00000467560 TLX2O43763 284 aaPredicted RBP12.83□□□□□ -0.36
ATPAF2-204ENST00000467560 SEC14L2O76054 403 aa12.83□□□□□ -0.36
ATPAF2-204ENST00000467560 IGLV1-44P01699 117 aa12.83□□□□□ -0.36
ATPAF2-204ENST00000467560 ZNF43P17038 809 aa12.83□□□□□ -0.36
ATPAF2-204ENST00000467560 ATP4BP51164 291 aa12.83□□□□□ -0.36
ATPAF2-204ENST00000467560 EFNA4P52798 201 aa12.83□□□□□ -0.36
ATPAF2-204ENST00000467560 UBE2NP61088 152 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms