RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 CHIAQ9BZP6 476 aa8.67□□□□□ -1.02
HDAC3-203ENST00000467533 MRPL46Q9H2W6 279 aaKnown RBP8.67□□□□□ -1.02
HDAC3-203ENST00000467533 PIF1Q9H611 641 aa8.67□□□□□ -1.02
HDAC3-203ENST00000467533 REEP4Q9H6H4 257 aa8.67□□□□□ -1.02
HDAC3-203ENST00000467533 SAP30LQ9HAJ7 183 aa8.67□□□□□ -1.02
HDAC3-203ENST00000467533 SLC6A13Q9NSD5 602 aa8.67□□□□□ -1.02
HDAC3-203ENST00000467533 SIRT3Q9NTG7 399 aaPredicted RBP8.67□□□□□ -1.02
HDAC3-203ENST00000467533 NECAP2Q9NVZ3 263 aa8.67□□□□□ -1.02
HDAC3-203ENST00000467533 DSPPQ9NZW4 1301 aa8.67□□□□□ -1.02
HDAC3-203ENST00000467533 STK38LQ9Y2H1 464 aa8.67□□□□□ -1.02
HDAC3-203ENST00000467533 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.67□□□□□ -1.02
HDAC3-203ENST00000467533 TMED7Q9Y3B3 224 aa8.67□□□□□ -1.02
HDAC3-203ENST00000467533 ZC3H12DA2A288 527 aaKnown RBP8.66□□□□□ -1.02
HDAC3-203ENST00000467533 SERTM1A2A2V5 107 aa8.66□□□□□ -1.02
HDAC3-203ENST00000467533 TMEM229AB2RXF0 380 aa8.66□□□□□ -1.02
HDAC3-203ENST00000467533 TRAPPC2LH3BP13 241 aa8.66□□□□□ -1.02
HDAC3-203ENST00000467533 ZNF208O43345 1280 aa8.66□□□□□ -1.02
HDAC3-203ENST00000467533 SHOX2O60902 331 aaPredicted RBP8.66□□□□□ -1.02
HDAC3-203ENST00000467533 SCN2BO60939 215 aa8.66□□□□□ -1.02
HDAC3-203ENST00000467533 HLA-HP01893 362 aa8.66□□□□□ -1.02
HDAC3-203ENST00000467533 GPIP06744 558 aa8.66□□□□□ -1.02
HDAC3-203ENST00000467533 MYZAPP0CAP1 466 aa8.66□□□□□ -1.02
HDAC3-203ENST00000467533 ZNF35P13682 527 aa8.66□□□□□ -1.02
HDAC3-203ENST00000467533 LSP1P33241 339 aa8.66□□□□□ -1.02
HDAC3-203ENST00000467533 HTR3AP46098 478 aa8.66□□□□□ -1.02
HDAC3-203ENST00000467533 POLR2HP52434 150 aaKnown RBP8.66□□□□□ -1.02
HDAC3-203ENST00000467533 PROK1P58294 105 aa8.66□□□□□ -1.02
HDAC3-203ENST00000467533 SELENOVP59797 346 aa8.66□□□□□ -1.02
HDAC3-203ENST00000467533 CALCOCO2Q13137 446 aa8.66□□□□□ -1.02
HDAC3-203ENST00000467533 ZNF141Q15928 474 aa8.66□□□□□ -1.02
HDAC3-203ENST00000467533 TSTQ16762 297 aaKnown RBP8.66□□□□□ -1.02
HDAC3-203ENST00000467533 GSG1Q2KHT4 349 aa8.66□□□□□ -1.02
HDAC3-203ENST00000467533 CEACAM16Q2WEN9 425 aa8.66□□□□□ -1.02
HDAC3-203ENST00000467533 UNC50Q53HI1 259 aa8.66□□□□□ -1.02
HDAC3-203ENST00000467533 ZNF678Q5SXM1 525 aa8.66□□□□□ -1.02
HDAC3-203ENST00000467533 TEX35Q5T0J7 233 aa8.66□□□□□ -1.02
HDAC3-203ENST00000467533 FAM205BPQ63HN1 556 aa8.66□□□□□ -1.02
HDAC3-203ENST00000467533 RGS7BPQ6MZT1 257 aaPredicted RBP8.66□□□□□ -1.02
HDAC3-203ENST00000467533 EMBQ6PCB8 327 aa8.66□□□□□ -1.02
HDAC3-203ENST00000467533 CREB3L2Q70SY1 520 aa8.66□□□□□ -1.02
HDAC3-203ENST00000467533 R3HCC1LQ7Z5L2 792 aaKnown RBP8.66□□□□□ -1.02
HDAC3-203ENST00000467533 CCDC36Q8IYA8 594 aa8.66□□□□□ -1.02
HDAC3-203ENST00000467533 OR56A1Q8NGH5 318 aa8.66□□□□□ -1.02
HDAC3-203ENST00000467533 OR5D16Q8NGK9 328 aa8.66□□□□□ -1.02
HDAC3-203ENST00000467533 LINC01006Q8NI28 216 aa8.66□□□□□ -1.02
HDAC3-203ENST00000467533 CCL17Q92583 94 aa8.66□□□□□ -1.02
HDAC3-203ENST00000467533 SGCDQ92629 289 aa8.66□□□□□ -1.02
HDAC3-203ENST00000467533 ELMOD3Q96FG2 381 aa8.66□□□□□ -1.02
HDAC3-203ENST00000467533 SLC47A1Q96FL8 570 aa8.66□□□□□ -1.02
HDAC3-203ENST00000467533 TMEM237Q96Q45 408 aa8.66□□□□□ -1.02
HDAC3-203ENST00000467533 TSPAN32Q96QS1 320 aa8.66□□□□□ -1.02
HDAC3-203ENST00000467533 OR7D2Q96RA2 312 aa8.66□□□□□ -1.02
HDAC3-203ENST00000467533 SDF2Q99470 211 aa8.66□□□□□ -1.02
HDAC3-203ENST00000467533 MRPL57Q9BQC6 102 aaKnown RBP8.66□□□□□ -1.02
HDAC3-203ENST00000467533 NKIRAS2Q9NYR9 191 aa8.66□□□□□ -1.02
HDAC3-203ENST00000467533 SLC7A8Q9UHI5 535 aa8.66□□□□□ -1.02
HDAC3-203ENST00000467533 KCNE5Q9UJ90 142 aa8.66□□□□□ -1.02
HDAC3-203ENST00000467533 MKLN1Q9UL63 735 aa8.66□□□□□ -1.02
HDAC3-203ENST00000467533 GOLGA6L6A8MZA4 724 aa8.65□□□□□ -1.02
HDAC3-203ENST00000467533 RPL36A-HNRNPH2H7BZ11 118 aa8.65□□□□□ -1.02
HDAC3-203ENST00000467533 BCAS1O75363 584 aaPredicted RBP8.65□□□□□ -1.02
HDAC3-203ENST00000467533 UGT2B17O75795 530 aa8.65□□□□□ -1.02
HDAC3-203ENST00000467533 CLPTM1O96005 669 aa8.65□□□□□ -1.02
HDAC3-203ENST00000467533 PLATP00750 562 aa8.65□□□□□ -1.02
HDAC3-203ENST00000467533 OPN1MWP04001 364 aa8.65□□□□□ -1.02
HDAC3-203ENST00000467533 OPN1MW2P0DN77 364 aa8.65□□□□□ -1.02
HDAC3-203ENST00000467533 OPN1MW3P0DN78 364 aa8.65□□□□□ -1.02
HDAC3-203ENST00000467533 ZNF14P17017 642 aaPredicted RBP8.65□□□□□ -1.02
HDAC3-203ENST00000467533 MAKP20794 623 aa8.65□□□□□ -1.02
HDAC3-203ENST00000467533 PTMSP20962 102 aa8.65□□□□□ -1.02
HDAC3-203ENST00000467533 PGM1P36871 562 aa8.65□□□□□ -1.02
HDAC3-203ENST00000467533 PTDSS1P48651 473 aaKnown RBP8.65□□□□□ -1.02
HDAC3-203ENST00000467533 IDH2P48735 452 aaKnown RBP8.65□□□□□ -1.02
HDAC3-203ENST00000467533 PKNOX1P55347 436 aa8.65□□□□□ -1.02
HDAC3-203ENST00000467533 KLF3P57682 345 aaPredicted RBP8.65□□□□□ -1.02
HDAC3-203ENST00000467533 PIGFQ07326 219 aa8.65□□□□□ -1.02
HDAC3-203ENST00000467533 LCP2Q13094 533 aa8.65□□□□□ -1.02
HDAC3-203ENST00000467533 FAM153CQ494X1 144 aa8.65□□□□□ -1.02
HDAC3-203ENST00000467533 CCBE1Q6UXH8 406 aaPredicted RBP8.65□□□□□ -1.02
HDAC3-203ENST00000467533 ZNF620Q6ZNG0 422 aa8.65□□□□□ -1.02
HDAC3-203ENST00000467533 OLIG3Q7RTU3 272 aa8.65□□□□□ -1.02
HDAC3-203ENST00000467533 CMIPQ8IY22 773 aa8.65□□□□□ -1.02
HDAC3-203ENST00000467533 GPR137CQ8N3F9 429 aa8.65□□□□□ -1.02
HDAC3-203ENST00000467533 FAM71CQ8NEG0 241 aa8.65□□□□□ -1.02
HDAC3-203ENST00000467533 CLHC1Q8NHS4 586 aa8.65□□□□□ -1.02
HDAC3-203ENST00000467533 TSSK3Q96PN8 268 aa8.65□□□□□ -1.02
HDAC3-203ENST00000467533 DIRC2Q96SL1 478 aa8.65□□□□□ -1.02
HDAC3-203ENST00000467533 DPH5Q9H2P9 285 aa8.65□□□□□ -1.02
HDAC3-203ENST00000467533 GPR35Q9HC97 309 aa8.65□□□□□ -1.02
HDAC3-203ENST00000467533 ADPRHL2Q9NX46 363 aa8.65□□□□□ -1.02
HDAC3-203ENST00000467533 OR5V1Q9UGF6 321 aa8.65□□□□□ -1.02
HDAC3-203ENST00000467533 OSGIN1Q9UJX0 560 aa8.65□□□□□ -1.02
HDAC3-203ENST00000467533 SLC35A3Q9Y2D2 325 aa8.65□□□□□ -1.02
HDAC3-203ENST00000467533 SLC22A23A1A5C7 686 aa8.64□□□□□ -1.03
HDAC3-203ENST00000467533 LIPT2A6NK58 231 aa8.64□□□□□ -1.03
HDAC3-203ENST00000467533 TBX19O60806 448 aa8.64□□□□□ -1.03
HDAC3-203ENST00000467533 SLC43A1O75387 559 aa8.64□□□□□ -1.03
HDAC3-203ENST00000467533 SEC22BO75396 215 aa8.64□□□□□ -1.03
HDAC3-203ENST00000467533 STX11O75558 287 aa8.64□□□□□ -1.03
HDAC3-203ENST00000467533 RAB36O95755 333 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms