RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 P2RY8Q86VZ1 359 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 TDRPQ86YL5 185 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 UBQLNLQ8IYU4 475 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 GABRG1Q8N1C3 465 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 FBXL14Q8N1E6 418 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 MUC15Q8N387 334 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 ZCCHC7Q8N3Z6 543 aaKnown RBP4.76□□□□□ -1.65
PTCD3-207ENST00000467273 OR52M1Q8NGK5 317 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 RDH11Q8TC12 318 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 BCAS4Q8TDM0 211 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 RNF138Q8WVD3 245 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 NEUROG1Q92886 237 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 UBE2E3Q969T4 207 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 REXO5Q96IC2 774 aaKnown RBP4.76□□□□□ -1.65
PTCD3-207ENST00000467273 PBKQ96KB5 322 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 SERPINB12Q96P63 405 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 F2RL3Q96RI0 385 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 NODALQ96S42 347 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 CENPKQ9BS16 269 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 EFCAB11Q9BUY7 163 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 ALG8Q9BVK2 526 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 MS4A8Q9BY19 250 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 DDX47Q9H0S4 455 aaKnown RBP4.76□□□□□ -1.65
PTCD3-207ENST00000467273 NXF5Q9H1B4 397 aaKnown RBP4.76□□□□□ -1.65
PTCD3-207ENST00000467273 WDR41Q9HAD4 459 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 SAP30LQ9HAJ7 183 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 HHATLQ9HCP6 504 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 PFDN4Q9NQP4 134 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 CORO1CQ9ULV4 474 aaPredicted RBP4.76□□□□□ -1.65
PTCD3-207ENST00000467273 NFU1Q9UMS0 254 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 WBP11Q9Y2W2 641 aaKnown RBP4.76□□□□□ -1.65
PTCD3-207ENST00000467273 FKBP7Q9Y680 259 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 AP4B1Q9Y6B7 739 aa4.76□□□□□ -1.65
PTCD3-207ENST00000467273 ZCWPW2A0A1B0GU75 182 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 DPRXA6NFQ7 191 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 OR6C65A6NJZ3 312 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 MPPED1O15442 326 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 CIDEAO60543 219 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 UGT2B11O75310 529 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 GCM2O75603 506 aaPredicted RBP4.75□□□□□ -1.65
PTCD3-207ENST00000467273 AQP8O94778 261 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 KRT14P02533 472 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 TUBBP07437 444 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 FGF4P08620 206 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 PABPC4LP0CB38 370 aaKnown RBP4.75□□□□□ -1.65
PTCD3-207ENST00000467273 MLNP12872 115 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 CD22P20273 847 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 DRD5P21918 477 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 GPX3P22352 226 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 AGTR1P30556 359 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 BMI1P35226 326 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 THBS4P35443 961 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 GGT5P36269 586 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 PPICP45877 212 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 DVL1P1P54792 670 aaPredicted RBP4.75□□□□□ -1.65
PTCD3-207ENST00000467273 PRRX1P54821 245 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 TPTEP56180 551 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 HILS1P60008 231 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 KRTAP10-7P60409 375 aaPredicted RBP4.75□□□□□ -1.65
PTCD3-207ENST00000467273 MRPS22P82650 360 aaKnown RBP4.75□□□□□ -1.65
PTCD3-207ENST00000467273 LGALS3BPQ08380 585 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 PLCXD2Q0VAA5 305 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 SLAMF1Q13291 335 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 SPA17Q15506 151 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 SGCBQ16585 318 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 CTU2Q2VPK5 515 aaKnown RBP4.75□□□□□ -1.65
PTCD3-207ENST00000467273 KCTD21Q4G0X4 260 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 SMUG1Q53HV7 270 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 CDKL4Q5MAI5 379 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 TCHHL1Q5QJ38 904 aaPredicted RBP4.75□□□□□ -1.65
PTCD3-207ENST00000467273 RAET1LQ5VY80 246 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 OR4C11Q6IEV9 310 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 AADACL2Q6P093 401 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 C16orf89Q6UX73 402 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 PEG10Q86TG7 708 aaKnown RBP4.75□□□□□ -1.65
PTCD3-207ENST00000467273 CCDC25Q86WR0 208 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 CNGA4Q8IV77 575 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 OR4N5Q8IXE1 308 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 TCAIMQ8N3R3 496 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 GALNT4Q8N4A0 578 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 FADS6Q8N9I5 356 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 OR4K17Q8NGC6 315 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 SLC26A7Q8TE54 656 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 KCTD4Q8WVF5 259 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 NPIPB3Q92617 1050 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 SGK3Q96BR1 496 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 ZBTB9Q96C00 473 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 MUCL1Q96DR8 90 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 OMA1Q96E52 524 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 CMTM7Q96FZ5 175 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 C7orf34Q96L11 122 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 COL21A1Q96P44 957 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 ABHD1Q96SE0 405 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 HBEGFQ99075 208 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 PRRG4Q9BZD6 226 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 PTGES2Q9H7Z7 377 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 CNOT10Q9H9A5 744 aaKnown RBP4.75□□□□□ -1.65
PTCD3-207ENST00000467273 SDHAF3Q9NRP4 125 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 LIN7CQ9NUP9 197 aaKnown RBP4.75□□□□□ -1.65
PTCD3-207ENST00000467273 LYARQ9NX58 379 aaKnown RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms