RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 SLC8B1Q6J4K2 584 aa3.01□□□□□ -1.93
VPS13A-209ENST00000467124 WDR74Q6RFH5 385 aaPredicted RBP3.01□□□□□ -1.93
VPS13A-209ENST00000467124 ZNF836Q6ZNA1 936 aa3.01□□□□□ -1.93
VPS13A-209ENST00000467124 ZNF546Q86UE3 836 aa3.01□□□□□ -1.93
VPS13A-209ENST00000467124 PAQR7Q86WK9 346 aa3.01□□□□□ -1.93
VPS13A-209ENST00000467124 TGIF2LYQ8IUE0 185 aa3.01□□□□□ -1.93
VPS13A-209ENST00000467124 ZNF100Q8IYN0 542 aa3.01□□□□□ -1.93
VPS13A-209ENST00000467124 OFCC1Q8IZS5 231 aa3.01□□□□□ -1.93
VPS13A-209ENST00000467124 GPD1LQ8N335 351 aa3.01□□□□□ -1.93
VPS13A-209ENST00000467124 PLPPR1Q8TBJ4 325 aa3.01□□□□□ -1.93
VPS13A-209ENST00000467124 SLC22A8Q8TCC7 542 aa3.01□□□□□ -1.93
VPS13A-209ENST00000467124 PYROXD1Q8WU10 500 aa3.01□□□□□ -1.93
VPS13A-209ENST00000467124 ANKRD49Q8WVL7 239 aa3.01□□□□□ -1.93
VPS13A-209ENST00000467124 FAM151AQ8WW52 585 aa3.01□□□□□ -1.93
VPS13A-209ENST00000467124 STARD8Q92502 1023 aa3.01□□□□□ -1.93
VPS13A-209ENST00000467124 EBF4Q9BQW3 602 aa3.01□□□□□ -1.93
VPS13A-209ENST00000467124 ADAP2Q9NPF8 381 aa3.01□□□□□ -1.93
VPS13A-209ENST00000467124 KCNIP1Q9NZI2 227 aa3.01□□□□□ -1.93
VPS13A-209ENST00000467124 TTC41PQ6P2S7 1318 aa3□□□□□ -1.93
VPS13A-209ENST00000467124 WDR19Q8NEZ3 1342 aa3□□□□□ -1.93
VPS13A-209ENST00000467124 SH3TC1Q8TE82 1336 aa3□□□□□ -1.93
VPS13A-209ENST00000467124 IGHV3OR16-13A0A075B7E8 117 aa3□□□□□ -1.93
VPS13A-209ENST00000467124 A0A0J9YXY3 114 aa3□□□□□ -1.93
VPS13A-209ENST00000467124 LOC110117498-PIK3R3F6TDL0 507 aa3□□□□□ -1.93
VPS13A-209ENST00000467124 SERF1AO75920 110 aa3□□□□□ -1.93
VPS13A-209ENST00000467124 ERLIN2O94905 339 aa3□□□□□ -1.93
VPS13A-209ENST00000467124 SEMG1P04279 462 aa3□□□□□ -1.93
VPS13A-209ENST00000467124 P0C879 139 aa3□□□□□ -1.93
VPS13A-209ENST00000467124 ANXA8P13928 327 aa3□□□□□ -1.93
VPS13A-209ENST00000467124 RFC4P35249 363 aa3□□□□□ -1.93
VPS13A-209ENST00000467124 CRYBB2P43320 205 aa3□□□□□ -1.93
VPS13A-209ENST00000467124 CAV2P51636 162 aa3□□□□□ -1.93
VPS13A-209ENST00000467124 HNRNPA3P51991 378 aaKnown RBP3□□□□□ -1.93
VPS13A-209ENST00000467124 ACLYP53396 1101 aa3□□□□□ -1.93
VPS13A-209ENST00000467124 APOC4P55056 127 aa3□□□□□ -1.93
VPS13A-209ENST00000467124 STX17P56962 302 aa3□□□□□ -1.93
VPS13A-209ENST00000467124 IGLV3-21P80748 117 aaPredicted RBP3□□□□□ -1.93
VPS13A-209ENST00000467124 REG3AQ06141 175 aa3□□□□□ -1.93
VPS13A-209ENST00000467124 ZNF239Q16600 458 aaKnown RBP3□□□□□ -1.93
VPS13A-209ENST00000467124 C9orf129Q5T035 196 aaKnown RBP3□□□□□ -1.93
VPS13A-209ENST00000467124 ANXA8L1Q5VT79 327 aa3□□□□□ -1.93
VPS13A-209ENST00000467124 C1orf146Q5VVC0 180 aa3□□□□□ -1.93
VPS13A-209ENST00000467124 METAP1DQ6UB28 335 aaPredicted RBP3□□□□□ -1.93
VPS13A-209ENST00000467124 CLEC2AQ6UVW9 174 aa3□□□□□ -1.93
VPS13A-209ENST00000467124 TMIGD1Q6UXZ0 262 aa3□□□□□ -1.93
VPS13A-209ENST00000467124 THOC6Q86W42 341 aaKnown RBP3□□□□□ -1.93
VPS13A-209ENST00000467124 PPP1R27Q86WC6 154 aa3□□□□□ -1.93
VPS13A-209ENST00000467124 PIANPQ8IYJ0 282 aa3□□□□□ -1.93
VPS13A-209ENST00000467124 FNDC5Q8NAU1 212 aa3□□□□□ -1.93
VPS13A-209ENST00000467124 OR9A1PQ8NGU1 263 aa3□□□□□ -1.93
VPS13A-209ENST00000467124 FAM81AQ8TBF8 368 aa3□□□□□ -1.93
VPS13A-209ENST00000467124 BRSK1Q8TDC3 778 aa3□□□□□ -1.93
VPS13A-209ENST00000467124 ARPC1AQ92747 370 aa3□□□□□ -1.93
VPS13A-209ENST00000467124 HSFY1Q96LI6 401 aa3□□□□□ -1.93
VPS13A-209ENST00000467124 OR8B4Q96RC9 309 aa3□□□□□ -1.93
VPS13A-209ENST00000467124 BPIFA3Q9BQP9 254 aa3□□□□□ -1.93
VPS13A-209ENST00000467124 RIOK1Q9BRS2 568 aaKnown RBP3□□□□□ -1.93
VPS13A-209ENST00000467124 OR51J1Q9H342 316 aa3□□□□□ -1.93
VPS13A-209ENST00000467124 NEK6Q9HC98 313 aa3□□□□□ -1.93
VPS13A-209ENST00000467124 ZNF160Q9HCG1 818 aa3□□□□□ -1.93
VPS13A-209ENST00000467124 AIG1Q9NVV5 245 aa3□□□□□ -1.93
VPS13A-209ENST00000467124 MARCH5Q9NX47 278 aa3□□□□□ -1.93
VPS13A-209ENST00000467124 GIN1Q9NXP7 522 aa3□□□□□ -1.93
VPS13A-209ENST00000467124 GCNT4Q9P109 453 aa3□□□□□ -1.93
VPS13A-209ENST00000467124 COL2A1P02458 1487 aaPredicted RBP3□□□□□ -1.93
VPS13A-209ENST00000467124 PHLPP2Q6ZVD8 1323 aa2.99□□□□□ -1.93
VPS13A-209ENST00000467124 SMCO3A2RU48 225 aa2.99□□□□□ -1.93
VPS13A-209ENST00000467124 TCP11X1B4DZS4 312 aa2.99□□□□□ -1.93
VPS13A-209ENST00000467124 ZNF780AO75290 641 aaPredicted RBP2.99□□□□□ -1.93
VPS13A-209ENST00000467124 CDH16O75309 829 aa2.99□□□□□ -1.93
VPS13A-209ENST00000467124 TNFSF13O75888 250 aa2.99□□□□□ -1.93
VPS13A-209ENST00000467124 OR2J3O76001 311 aa2.99□□□□□ -1.93
VPS13A-209ENST00000467124 AGTP01019 485 aa2.99□□□□□ -1.93
VPS13A-209ENST00000467124 FGGP02679 453 aa2.99□□□□□ -1.93
VPS13A-209ENST00000467124 FTH1P02794 183 aa2.99□□□□□ -1.93
VPS13A-209ENST00000467124 ASGR1P07306 291 aa2.99□□□□□ -1.93
VPS13A-209ENST00000467124 CRYGBP07316 175 aa2.99□□□□□ -1.93
VPS13A-209ENST00000467124 FGF4P08620 206 aa2.99□□□□□ -1.93
VPS13A-209ENST00000467124 SFTPCP11686 197 aa2.99□□□□□ -1.93
VPS13A-209ENST00000467124 PRPS1P60891 318 aa2.99□□□□□ -1.93
VPS13A-209ENST00000467124 ZNF45Q02386 682 aa2.99□□□□□ -1.93
VPS13A-209ENST00000467124 HERPUD1Q15011 391 aa2.99□□□□□ -1.93
VPS13A-209ENST00000467124 PRR30Q53SZ7 412 aaPredicted RBP2.99□□□□□ -1.93
VPS13A-209ENST00000467124 SOHLH1Q5JUK2 328 aa2.99□□□□□ -1.93
VPS13A-209ENST00000467124 UTF1Q5T230 341 aa2.99□□□□□ -1.93
VPS13A-209ENST00000467124 GPR157Q5UAW9 335 aa2.99□□□□□ -1.93
VPS13A-209ENST00000467124 CNIH2Q6PI25 160 aa2.99□□□□□ -1.93
VPS13A-209ENST00000467124 SASS6Q6UVJ0 657 aa2.99□□□□□ -1.93
VPS13A-209ENST00000467124 TFAP2EQ6VUC0 442 aa2.99□□□□□ -1.93
VPS13A-209ENST00000467124 ZNF620Q6ZNG0 422 aa2.99□□□□□ -1.93
VPS13A-209ENST00000467124 PRSS41Q7RTY9 318 aa2.99□□□□□ -1.93
VPS13A-209ENST00000467124 MFSD6LQ8IWD5 586 aa2.99□□□□□ -1.93
VPS13A-209ENST00000467124 PUSL1Q8N0Z8 303 aaKnown RBP2.99□□□□□ -1.93
VPS13A-209ENST00000467124 GTPBP8Q8N3Z3 284 aaPredicted RBP2.99□□□□□ -1.93
VPS13A-209ENST00000467124 C11orf42Q8N5U0 333 aa2.99□□□□□ -1.93
VPS13A-209ENST00000467124 BBOF1Q8ND07 529 aa2.99□□□□□ -1.93
VPS13A-209ENST00000467124 B3GNT7Q8NFL0 401 aa2.99□□□□□ -1.93
VPS13A-209ENST00000467124 OR2G2Q8NGZ5 317 aa2.99□□□□□ -1.93
VPS13A-209ENST00000467124 OR5B3Q8NH48 314 aa2.99□□□□□ -1.93
VPS13A-209ENST00000467124 OR1E3Q8WZA6 343 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms