RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 CDK16Q00536 496 aa1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 ENPEPQ07075 957 aa1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 BST2Q10589 180 aaKnown RBP1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 DPYSL3Q14195 570 aa1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 SLC15A2Q16348 729 aa1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 KLHL38Q2WGJ6 581 aa1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 BCL7AQ4VC05 210 aa1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 DMRTC1Q5HYR2 192 aa1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 SPANXN2Q5MJ10 180 aa1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 C1orf185Q5T7R7 199 aa1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 GPR157Q5UAW9 335 aa1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 CARD17Q5XLA6 110 aa1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 LRRC66Q68CR7 880 aa1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 RNASEKQ6P5S7 137 aaKnown RBP1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 FAM199XQ6PEV8 388 aaPredicted RBP1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 ENPP6Q6UWR7 440 aa1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 TMEM107Q6UX40 140 aa1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 CCDC73Q6ZRK6 1079 aa1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 SERPINA9Q86WD7 417 aa1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 CSNK1A1LQ8N752 337 aa1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 CEP112Q8N8E3 955 aa1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 C20orf203Q8NBC4 194 aa1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 SUMF2Q8NBJ7 301 aa1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 SPATA4Q8NEY3 305 aa1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 BLOC1S5Q8TDH9 187 aa1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 MRPS31Q92665 395 aaKnown RBP1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 RDH5Q92781 318 aa1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 NEIL2Q969S2 332 aa1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 PSMG2Q969U7 264 aa1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 MCUR1Q96AQ8 359 aa1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 EFHD2Q96C19 240 aaPredicted RBP1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 HAVCR1Q96D42 359 aa1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 CELF6Q96J87 481 aaKnown RBP1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 C12orf42Q96LP6 360 aa1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 CLCC1Q96S66 551 aa1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 CYP2S1Q96SQ9 504 aa1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 MCHR1Q99705 422 aa1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 MTG1Q9BT17 334 aaPredicted RBP1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 RSPO3Q9BXY4 272 aaPredicted RBP1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 NAT10Q9H0A0 1025 aaKnown RBP1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 AZI2Q9H6S1 392 aa1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 EXO5Q9H790 373 aa1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 NHEJ1Q9H9Q4 299 aaPredicted RBP1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 POPDC2Q9HBU9 364 aa1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 CRLF2Q9HC73 371 aa1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 GLRX2Q9NS18 164 aa1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 PAK1IP1Q9NWT1 392 aaPredicted RBP1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 KLHL28Q9NXS3 571 aa1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 BFARQ9NZS9 450 aa1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 WRAP73Q9P2S5 460 aaPredicted RBP1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 PSMC3IPQ9P2W1 217 aaPredicted RBP1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 IKZF2Q9UKS7 526 aa1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 KIAA1257Q9ULG3 409 aa1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 COPS3Q9UNS2 423 aa1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 SAMD4AQ9UPU9 718 aaKnown RBP1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 L3MBTL1Q9Y468 752 aa1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 CACNG2Q9Y698 323 aa1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 ATP10AO60312 1499 aa1.49□□□□□ -2.17
GTF3C3-209ENST00000466862 PNPLA6Q8IY17 1366 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 RPAP1Q9BWH6 1393 aaPredicted RBP1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 ANKRD30BQ9BXX2 1392 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 KIF26AQ9ULI4 1882 aaPredicted RBP1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 IGLV4-60A0A075B6I1 120 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 LOC100131303A0A0U1RQF7 123 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 IQANK1A0A1B0GTG1 560 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 SMIM28A0A1B0GU29 152 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 SERTM2A0A1B0GWG4 89 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 A0A1W2PPE3 182 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 NCF1BA6NI72 391 aaPredicted RBP1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 VSTM2BA6NLU5 285 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 OR2AG2A6NM03 316 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 NCF1CA8MVU1 366 aaPredicted RBP1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 A8MXQ7 604 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 C9JVG2 144 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 E7ESA3 106 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 E9PLD3 99 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 BOLA2-SMG1P6H3BVE0 249 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 KIF2AO00139 706 aaPredicted RBP1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 CACNG3O60359 315 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 PFKFB2O60825 505 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 DNAJB6O75190 326 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 NPIPB7O75200 414 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 CDH16O75309 829 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 SCRG1O75711 98 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 SUPT7LO94864 414 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 GNA14O95837 355 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 CST1P01037 141 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 IGHV3-48P01763 117 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 GAPDHP04406 335 aaKnown RBP1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 LGALS2P05162 132 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 CRYGBP07316 175 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 MCF2P10911 925 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 POLR2EP19388 210 aaKnown RBP1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 CHMLP26374 656 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 CD1CP29017 333 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 NMT1P30419 496 aaKnown RBP1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 HNRNPH3P31942 346 aaKnown RBP1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 CASP14P31944 242 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 EPHX2P34913 555 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms