RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 SLC2A7Q6PXP3 512 aa17.87■□□□□ 0.45
COL6A1-203ENST00000466285 SLC46A3Q7Z3Q1 461 aa17.87■□□□□ 0.45
COL6A1-203ENST00000466285 PIMREGQ9BSJ6 248 aa17.87■□□□□ 0.45
COL6A1-203ENST00000466285 KATNB1Q9BVA0 655 aa17.87■□□□□ 0.45
COL6A1-203ENST00000466285 SPATA9Q9BWV2 254 aa17.87■□□□□ 0.45
COL6A1-203ENST00000466285 PAIP1Q9H074 479 aaKnown RBP17.87■□□□□ 0.45
COL6A1-203ENST00000466285 SHARPINQ9H0F6 387 aa17.87■□□□□ 0.45
COL6A1-203ENST00000466285 TMEM45AQ9NWC5 275 aa17.87■□□□□ 0.45
COL6A1-203ENST00000466285 KRT33AO76009 404 aa17.86■□□□□ 0.45
COL6A1-203ENST00000466285 ZCCHC18P0CG32 403 aa17.86■□□□□ 0.45
COL6A1-203ENST00000466285 CBLP22681 906 aa17.86■□□□□ 0.45
COL6A1-203ENST00000466285 SERPINF1P36955 418 aa17.86■□□□□ 0.45
COL6A1-203ENST00000466285 TXNL4AP83876 142 aaKnown RBP17.86■□□□□ 0.45
COL6A1-203ENST00000466285 ARF1P84077 181 aaKnown RBP17.86■□□□□ 0.45
COL6A1-203ENST00000466285 GLIPR1L2Q4G1C9 344 aa17.86■□□□□ 0.45
COL6A1-203ENST00000466285 HHATQ5VTY9 493 aa17.86■□□□□ 0.45
COL6A1-203ENST00000466285 MSRB3Q8IXL7 192 aa17.86■□□□□ 0.45
COL6A1-203ENST00000466285 WFDC6Q9BQY6 131 aa17.86■□□□□ 0.45
COL6A1-203ENST00000466285 SDR39U1Q9NRG7 319 aaPredicted RBP17.86■□□□□ 0.45
COL6A1-203ENST00000466285 FKBP7Q9Y680 259 aa17.86■□□□□ 0.45
COL6A1-203ENST00000466285 LOC100289279A0A1B0GTE1 492 aa17.85■□□□□ 0.45
COL6A1-203ENST00000466285 M0R082 166 aa17.85■□□□□ 0.45
COL6A1-203ENST00000466285 FZD7O75084 574 aa17.85■□□□□ 0.45
COL6A1-203ENST00000466285 AHSA1O95433 338 aa17.85■□□□□ 0.45
COL6A1-203ENST00000466285 HPRP00739 348 aa17.85■□□□□ 0.45
COL6A1-203ENST00000466285 APEHP13798 732 aaKnown RBP17.85■□□□□ 0.45
COL6A1-203ENST00000466285 IDO1P14902 403 aa17.85■□□□□ 0.45
COL6A1-203ENST00000466285 THBS4P35443 961 aa17.85■□□□□ 0.45
COL6A1-203ENST00000466285 IDH3GP51553 393 aaPredicted RBP17.85■□□□□ 0.45
COL6A1-203ENST00000466285 C6orf10Q5SRN2 563 aa17.85■□□□□ 0.45
COL6A1-203ENST00000466285 NBEAL1Q6ZS30 2694 aa17.85■□□□□ 0.45
COL6A1-203ENST00000466285 SVOPLQ8N434 492 aa17.85■□□□□ 0.45
COL6A1-203ENST00000466285 GLB1L3Q8NCI6 653 aaPredicted RBP17.85■□□□□ 0.45
COL6A1-203ENST00000466285 ZNF417Q8TAU3 575 aa17.85■□□□□ 0.45
COL6A1-203ENST00000466285 TAAR8Q969N4 342 aa17.85■□□□□ 0.45
COL6A1-203ENST00000466285 ZNF587Q96SQ5 575 aaPredicted RBP17.85■□□□□ 0.45
COL6A1-203ENST00000466285 C19orf24Q9BVV8 132 aa17.85■□□□□ 0.45
COL6A1-203ENST00000466285 LINC00470Q9BZP3 86 aa17.85■□□□□ 0.45
COL6A1-203ENST00000466285 PLK3Q9H4B4 646 aa17.85■□□□□ 0.45
COL6A1-203ENST00000466285 OBP2BQ9NPH6 170 aa17.85■□□□□ 0.45
COL6A1-203ENST00000466285 THAP1Q9NVV9 213 aa17.85■□□□□ 0.45
COL6A1-203ENST00000466285 SLC25A37Q9NYZ2 338 aa17.85■□□□□ 0.45
COL6A1-203ENST00000466285 RASD1Q9Y272 281 aa17.85■□□□□ 0.45
COL6A1-203ENST00000466285 PCDHB14Q9Y5E9 798 aa17.85■□□□□ 0.45
COL6A1-203ENST00000466285 TRAF3IP2O43734 574 aaPredicted RBP17.84■□□□□ 0.45
COL6A1-203ENST00000466285 ANP32DO95626 131 aa17.84■□□□□ 0.45
COL6A1-203ENST00000466285 IGKV3-15P01624 115 aa17.84■□□□□ 0.45
COL6A1-203ENST00000466285 IL6P05231 212 aa17.84■□□□□ 0.45
COL6A1-203ENST00000466285 GZMKP49863 264 aa17.84■□□□□ 0.45
COL6A1-203ENST00000466285 UBE2NP61088 152 aaKnown RBP17.84■□□□□ 0.45
COL6A1-203ENST00000466285 COPZ1P61923 177 aa17.84■□□□□ 0.45
COL6A1-203ENST00000466285 EFNB3Q15768 340 aa17.84■□□□□ 0.45
COL6A1-203ENST00000466285 ZNF311Q5JNZ3 666 aa17.84■□□□□ 0.45
COL6A1-203ENST00000466285 FAM166AQ6J272 317 aa17.84■□□□□ 0.45
COL6A1-203ENST00000466285 CDK20Q8IZL9 346 aa17.84■□□□□ 0.45
COL6A1-203ENST00000466285 TMEM123Q8N131 208 aa17.84■□□□□ 0.45
COL6A1-203ENST00000466285 MFSD8Q8NHS3 518 aa17.84■□□□□ 0.45
COL6A1-203ENST00000466285 STK35Q8TDR2 534 aa17.84■□□□□ 0.45
COL6A1-203ENST00000466285 GTF2H4Q92759 462 aa17.84■□□□□ 0.45
COL6A1-203ENST00000466285 PIF1Q9H611 641 aa17.84■□□□□ 0.45
COL6A1-203ENST00000466285 GPR35Q9HC97 309 aa17.84■□□□□ 0.45
COL6A1-203ENST00000466285 ZIM2Q9NZV7 527 aa17.84■□□□□ 0.45
COL6A1-203ENST00000466285 SLAMF8Q9P0V8 285 aa17.84■□□□□ 0.45
COL6A1-203ENST00000466285 IGHV2OR16-5A0A0B4J2B6 119 aa17.83■□□□□ 0.44
COL6A1-203ENST00000466285 A0A1B0GWA3 101 aa17.83■□□□□ 0.44
COL6A1-203ENST00000466285 TMEM129A0AVI4 362 aa17.83■□□□□ 0.44
COL6A1-203ENST00000466285 TRPC5OSA6NMA1 111 aa17.83■□□□□ 0.44
COL6A1-203ENST00000466285 LYNX1G3V0Z9 82 aa17.83■□□□□ 0.44
COL6A1-203ENST00000466285 TPST1O60507 370 aa17.83■□□□□ 0.44
COL6A1-203ENST00000466285 CRYAAP02489 173 aa17.83■□□□□ 0.44
COL6A1-203ENST00000466285 LYNX1P0DP58 116 aa17.83■□□□□ 0.44
COL6A1-203ENST00000466285 HLA-DOBP13765 273 aa17.83■□□□□ 0.44
COL6A1-203ENST00000466285 SRD5A1P18405 259 aa17.83■□□□□ 0.44
COL6A1-203ENST00000466285 POLR2JP52435 117 aaKnown RBP17.83■□□□□ 0.44
COL6A1-203ENST00000466285 LRRC74AQ0VAA2 488 aa17.83■□□□□ 0.44
COL6A1-203ENST00000466285 NPRL3Q12980 569 aa17.83■□□□□ 0.44
COL6A1-203ENST00000466285 LARS2Q15031 903 aaKnown RBP17.83■□□□□ 0.44
COL6A1-203ENST00000466285 RGNQ15493 299 aa17.83■□□□□ 0.44
COL6A1-203ENST00000466285 CEACAM16Q2WEN9 425 aa17.83■□□□□ 0.44
COL6A1-203ENST00000466285 C6orf89Q6UWU4 347 aa17.83■□□□□ 0.44
COL6A1-203ENST00000466285 ABHD12BQ7Z5M8 362 aaPredicted RBP17.83■□□□□ 0.44
COL6A1-203ENST00000466285 MDP1Q86V88 176 aa17.83■□□□□ 0.44
COL6A1-203ENST00000466285 KIRREL3Q8IZU9 778 aa17.83■□□□□ 0.44
COL6A1-203ENST00000466285 MAGEE2Q8TD90 523 aaPredicted RBP17.83■□□□□ 0.44
COL6A1-203ENST00000466285 OR2M2Q96R28 347 aa17.83■□□□□ 0.44
COL6A1-203ENST00000466285 IKZF5Q9H5V7 419 aa17.83■□□□□ 0.44
COL6A1-203ENST00000466285 A4GALTQ9NPC4 353 aa17.83■□□□□ 0.44
COL6A1-203ENST00000466285 CALML5Q9NZT1 146 aa17.83■□□□□ 0.44
COL6A1-203ENST00000466285 LPAR3Q9UBY5 353 aa17.83■□□□□ 0.44
COL6A1-203ENST00000466285 RAB21Q9UL25 225 aa17.83■□□□□ 0.44
COL6A1-203ENST00000466285 KCNS2Q9ULS6 477 aa17.83■□□□□ 0.44
COL6A1-203ENST00000466285 A0A0G2JPF8 293 aa17.82■□□□□ 0.44
COL6A1-203ENST00000466285 HNRNPCL2B2RXH8 293 aa17.82■□□□□ 0.44
COL6A1-203ENST00000466285 HNRNPCL3B7ZW38 293 aa17.82■□□□□ 0.44
COL6A1-203ENST00000466285 B9A039 149 aa17.82■□□□□ 0.44
COL6A1-203ENST00000466285 hCG_2039718K7EN88 272 aa17.82■□□□□ 0.44
COL6A1-203ENST00000466285 HNRNPCL1O60812 293 aaKnown RBP17.82■□□□□ 0.44
COL6A1-203ENST00000466285 VAMP5O95183 116 aa17.82■□□□□ 0.44
COL6A1-203ENST00000466285 HNRNPCL4P0DMR1 293 aa17.82■□□□□ 0.44
COL6A1-203ENST00000466285 BMP4P12644 408 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms