RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 ARHGEF9O43307 516 aa15.72■□□□□ 0.11
COL7A1-205ENST00000465238 DNAJC8O75937 253 aaPredicted RBP15.72■□□□□ 0.11
COL7A1-205ENST00000465238 AKR7A3O95154 331 aa15.72■□□□□ 0.11
COL7A1-205ENST00000465238 LYPD3O95274 346 aa15.72■□□□□ 0.11
COL7A1-205ENST00000465238 YES1P07947 543 aa15.72■□□□□ 0.11
COL7A1-205ENST00000465238 THRBP10828 461 aa15.72■□□□□ 0.11
COL7A1-205ENST00000465238 CCKARP32238 428 aa15.72■□□□□ 0.11
COL7A1-205ENST00000465238 ST3GAL3Q11203 375 aa15.72■□□□□ 0.11
COL7A1-205ENST00000465238 GUSBP1Q15486 140 aa15.72■□□□□ 0.11
COL7A1-205ENST00000465238 OTUD3Q5T2D3 398 aaPredicted RBP15.72■□□□□ 0.11
COL7A1-205ENST00000465238 FAM69AQ5T7M9 428 aa15.72■□□□□ 0.11
COL7A1-205ENST00000465238 PAQR6Q6TCH4 344 aa15.72■□□□□ 0.11
COL7A1-205ENST00000465238 DHFR2Q86XF0 187 aa15.72■□□□□ 0.11
COL7A1-205ENST00000465238 KRTAP1-3Q8IUG1 177 aa15.72■□□□□ 0.11
COL7A1-205ENST00000465238 TUSC5Q8IXB3 177 aa15.72■□□□□ 0.11
COL7A1-205ENST00000465238 C10orf53Q8N6V4 93 aa15.72■□□□□ 0.11
COL7A1-205ENST00000465238 PIGTQ969N2 578 aa15.72■□□□□ 0.11
COL7A1-205ENST00000465238 TAAR8Q969N4 342 aa15.72■□□□□ 0.11
COL7A1-205ENST00000465238 PRRC1Q96M27 445 aa15.72■□□□□ 0.11
COL7A1-205ENST00000465238 PIP5K1AQ99755 562 aa15.72■□□□□ 0.11
COL7A1-205ENST00000465238 FNDC11Q9BVV2 318 aa15.72■□□□□ 0.11
COL7A1-205ENST00000465238 KLHL13Q9P2N7 655 aa15.72■□□□□ 0.11
COL7A1-205ENST00000465238 PROCRQ9UNN8 238 aa15.72■□□□□ 0.11
COL7A1-205ENST00000465238 FAM32AQ9Y421 112 aaKnown RBP15.72■□□□□ 0.11
COL7A1-205ENST00000465238 SIAH2O43255 324 aa15.71■□□□□ 0.11
COL7A1-205ENST00000465238 PTNP21246 168 aa15.71■□□□□ 0.11
COL7A1-205ENST00000465238 H3F3AP84243 136 aa15.71■□□□□ 0.11
COL7A1-205ENST00000465238 MFSD13AQ14CX5 517 aa15.71■□□□□ 0.11
COL7A1-205ENST00000465238 PDK3Q15120 406 aa15.71■□□□□ 0.11
COL7A1-205ENST00000465238 MTX3Q5HYI7 312 aa15.71■□□□□ 0.11
COL7A1-205ENST00000465238 TMEM225Q6GV28 225 aa15.71■□□□□ 0.11
COL7A1-205ENST00000465238 ABLIM2Q6H8Q1 611 aa15.71■□□□□ 0.11
COL7A1-205ENST00000465238 CCDC103Q8IW40 242 aa15.71■□□□□ 0.11
COL7A1-205ENST00000465238 LRRC75A-AS1Q8N1F1 130 aa15.71■□□□□ 0.11
COL7A1-205ENST00000465238 FAM86B1Q8N7N1 296 aa15.71■□□□□ 0.11
COL7A1-205ENST00000465238 TMEM99Q8N816 258 aa15.71■□□□□ 0.11
COL7A1-205ENST00000465238 ZNF610Q8N9Z0 462 aa15.71■□□□□ 0.11
COL7A1-205ENST00000465238 OR6K3Q8NGY3 331 aa15.71■□□□□ 0.11
COL7A1-205ENST00000465238 OR6S1Q8NH40 331 aa15.71■□□□□ 0.11
COL7A1-205ENST00000465238 MCUR1Q96AQ8 359 aa15.71■□□□□ 0.11
COL7A1-205ENST00000465238 CCDC124Q96CT7 223 aaKnown RBP15.71■□□□□ 0.11
COL7A1-205ENST00000465238 ASB9Q96DX5 294 aa15.71■□□□□ 0.11
COL7A1-205ENST00000465238 PIK3IP1Q96FE7 263 aa15.71■□□□□ 0.11
COL7A1-205ENST00000465238 LRGUKQ96M69 825 aa15.71■□□□□ 0.11
COL7A1-205ENST00000465238 PSD2Q9BQI7 771 aa15.71■□□□□ 0.11
COL7A1-205ENST00000465238 PTDSS2Q9BVG9 487 aa15.71■□□□□ 0.11
COL7A1-205ENST00000465238 EMC3Q9P0I2 261 aa15.71■□□□□ 0.11
COL7A1-205ENST00000465238 A4GNTQ9UNA3 340 aa15.71■□□□□ 0.11
COL7A1-205ENST00000465238 ENPP4Q9Y6X5 453 aa15.71■□□□□ 0.11
COL7A1-205ENST00000465238 ROS1P08922 2347 aa15.7■□□□□ 0.1
COL7A1-205ENST00000465238 FTCDNL1E5RQL4 147 aa15.7■□□□□ 0.1
COL7A1-205ENST00000465238 GPR171O14626 319 aa15.7■□□□□ 0.1
COL7A1-205ENST00000465238 GSC2O15499 205 aa15.7■□□□□ 0.1
COL7A1-205ENST00000465238 INHBBP09529 407 aa15.7■□□□□ 0.1
COL7A1-205ENST00000465238 ITGA2P17301 1181 aa15.7■□□□□ 0.1
COL7A1-205ENST00000465238 ATP6V1B2P21281 511 aa15.7■□□□□ 0.1
COL7A1-205ENST00000465238 AGTR1P30556 359 aa15.7■□□□□ 0.1
COL7A1-205ENST00000465238 RBM34P42696 430 aaKnown RBP15.7■□□□□ 0.1
COL7A1-205ENST00000465238 MS4A2Q01362 244 aa15.7■□□□□ 0.1
COL7A1-205ENST00000465238 LCN8Q6JVE9 175 aa15.7■□□□□ 0.1
COL7A1-205ENST00000465238 WDR88Q6ZMY6 472 aa15.7■□□□□ 0.1
COL7A1-205ENST00000465238 NKAIN4Q8IVV8 208 aa15.7■□□□□ 0.1
COL7A1-205ENST00000465238 POP5Q969H6 163 aaKnown RBP15.7■□□□□ 0.1
COL7A1-205ENST00000465238 ZNF775Q96BV0 537 aaPredicted RBP15.7■□□□□ 0.1
COL7A1-205ENST00000465238 HS6ST2Q96MM7 605 aa15.7■□□□□ 0.1
COL7A1-205ENST00000465238 PRSS27Q9BQR3 290 aa15.7■□□□□ 0.1
COL7A1-205ENST00000465238 SLC19A3Q9BZV2 496 aa15.7■□□□□ 0.1
COL7A1-205ENST00000465238 BCO1Q9HAY6 547 aa15.7■□□□□ 0.1
COL7A1-205ENST00000465238 RHCGQ9UBD6 479 aa15.7■□□□□ 0.1
COL7A1-205ENST00000465238 DSCAMO60469 2012 aa15.7■□□□□ 0.1
COL7A1-205ENST00000465238 AQP7P3A6NL99 342 aa15.69■□□□□ 0.1
COL7A1-205ENST00000465238 ZNF724A8MTY0 619 aa15.69■□□□□ 0.1
COL7A1-205ENST00000465238 ZNF814B7Z6K7 855 aa15.69■□□□□ 0.1
COL7A1-205ENST00000465238 J3KTA2 159 aa15.69■□□□□ 0.1
COL7A1-205ENST00000465238 hCG_2039718K7EN88 272 aa15.69■□□□□ 0.1
COL7A1-205ENST00000465238 EBAG9O00559 213 aa15.69■□□□□ 0.1
COL7A1-205ENST00000465238 KPNA4O00629 521 aaPredicted RBP15.69■□□□□ 0.1
COL7A1-205ENST00000465238 RAMP1O60894 148 aa15.69■□□□□ 0.1
COL7A1-205ENST00000465238 SMPD2O60906 423 aa15.69■□□□□ 0.1
COL7A1-205ENST00000465238 VAMP5O95183 116 aa15.69■□□□□ 0.1
COL7A1-205ENST00000465238 CBLP22681 906 aa15.69■□□□□ 0.1
COL7A1-205ENST00000465238 TRAP1Q12931 704 aaKnown RBP15.69■□□□□ 0.1
COL7A1-205ENST00000465238 TRAM2Q15035 370 aa15.69■□□□□ 0.1
COL7A1-205ENST00000465238 ACKR1Q16570 336 aa15.69■□□□□ 0.1
COL7A1-205ENST00000465238 CCDC121Q6ZUS5 278 aa15.69■□□□□ 0.1
COL7A1-205ENST00000465238 OFCC1Q8IZS5 231 aa15.69■□□□□ 0.1
COL7A1-205ENST00000465238 C7orf34Q96L11 122 aa15.69■□□□□ 0.1
COL7A1-205ENST00000465238 ZNF300Q96RE9 604 aaPredicted RBP15.69■□□□□ 0.1
COL7A1-205ENST00000465238 ZNF426Q9BUY5 554 aa15.69■□□□□ 0.1
COL7A1-205ENST00000465238 ASPNQ9BXN1 380 aa15.69■□□□□ 0.1
COL7A1-205ENST00000465238 TRIM15Q9C019 465 aa15.69■□□□□ 0.1
COL7A1-205ENST00000465238 KLHL4Q9C0H6 718 aa15.69■□□□□ 0.1
COL7A1-205ENST00000465238 C12orf49Q9H741 205 aa15.69■□□□□ 0.1
COL7A1-205ENST00000465238 PLSCR4Q9NRQ2 329 aa15.69■□□□□ 0.1
COL7A1-205ENST00000465238 ING1Q9UK53 422 aaPredicted RBP15.69■□□□□ 0.1
COL7A1-205ENST00000465238 CORINQ9Y5Q5 1042 aa15.69■□□□□ 0.1
COL7A1-205ENST00000465238 IGKV3D-15A0A087WSY6 115 aa15.68■□□□□ 0.1
COL7A1-205ENST00000465238 ZNF716A6NP11 495 aa15.68■□□□□ 0.1
COL7A1-205ENST00000465238 FFAR1O14842 300 aa15.68■□□□□ 0.1
COL7A1-205ENST00000465238 MT-ATP6P00846 226 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms