RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 FBXO32Q969P5 355 aa2.81□□□□□ -1.96
CLK1-208ENST00000464454 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.81□□□□□ -1.96
CLK1-208ENST00000464454 ITCHQ96J02 903 aa2.81□□□□□ -1.96
CLK1-208ENST00000464454 SLC35E1Q96K37 410 aa2.81□□□□□ -1.96
CLK1-208ENST00000464454 KCNA7Q96RP8 456 aa2.81□□□□□ -1.96
CLK1-208ENST00000464454 NRIP2Q9BQI9 281 aa2.81□□□□□ -1.96
CLK1-208ENST00000464454 ROPN1BQ9BZX4 212 aaPredicted RBP2.81□□□□□ -1.96
CLK1-208ENST00000464454 GBA3Q9H227 469 aa2.81□□□□□ -1.96
CLK1-208ENST00000464454 ANKRD19PQ9H560 264 aa2.81□□□□□ -1.96
CLK1-208ENST00000464454 NMRAL1Q9HBL8 299 aa2.81□□□□□ -1.96
CLK1-208ENST00000464454 IL26Q9NPH9 171 aa2.81□□□□□ -1.96
CLK1-208ENST00000464454 SUN2Q9UH99 717 aa2.81□□□□□ -1.96
CLK1-208ENST00000464454 RLFQ13129 1914 aa2.81□□□□□ -1.96
CLK1-208ENST00000464454 PHF3Q92576 2039 aaKnown RBP2.81□□□□□ -1.96
CLK1-208ENST00000464454 GTF3C1Q12789 2109 aa2.8□□□□□ -1.96
CLK1-208ENST00000464454 A0A0U1RQS6 177 aa2.8□□□□□ -1.96
CLK1-208ENST00000464454 BTBD17A6NE02 478 aa2.8□□□□□ -1.96
CLK1-208ENST00000464454 E9PBE3 544 aa2.8□□□□□ -1.96
CLK1-208ENST00000464454 HAS3O00219 553 aa2.8□□□□□ -1.96
CLK1-208ENST00000464454 SNX4O95219 450 aa2.8□□□□□ -1.96
CLK1-208ENST00000464454 FMO3P31513 532 aa2.8□□□□□ -1.96
CLK1-208ENST00000464454 HSD17B2P37059 387 aa2.8□□□□□ -1.96
CLK1-208ENST00000464454 VDAC2P45880 294 aaPredicted RBP2.8□□□□□ -1.96
CLK1-208ENST00000464454 ACTR3P61158 418 aa2.8□□□□□ -1.96
CLK1-208ENST00000464454 ERVK-25P63136 954 aa2.8□□□□□ -1.96
CLK1-208ENST00000464454 DGUOKQ16854 277 aa2.8□□□□□ -1.96
CLK1-208ENST00000464454 ZNF630Q2M218 657 aaPredicted RBP2.8□□□□□ -1.96
CLK1-208ENST00000464454 PAGE3Q5JUK9 113 aa2.8□□□□□ -1.96
CLK1-208ENST00000464454 CTSL3PQ5NE16 218 aa2.8□□□□□ -1.96
CLK1-208ENST00000464454 GPR157Q5UAW9 335 aa2.8□□□□□ -1.96
CLK1-208ENST00000464454 UQCC3Q6UW78 93 aa2.8□□□□□ -1.96
CLK1-208ENST00000464454 LRRC31Q6UY01 552 aa2.8□□□□□ -1.96
CLK1-208ENST00000464454 NANOGNBQ7Z5D8 188 aa2.8□□□□□ -1.96
CLK1-208ENST00000464454 PAQR7Q86WK9 346 aa2.8□□□□□ -1.96
CLK1-208ENST00000464454 NECAB1Q8N987 351 aa2.8□□□□□ -1.96
CLK1-208ENST00000464454 LINC01555Q8NAE3 123 aa2.8□□□□□ -1.96
CLK1-208ENST00000464454 OR9G1Q8NH87 305 aa2.8□□□□□ -1.96
CLK1-208ENST00000464454 FAM110BQ8TC76 370 aa2.8□□□□□ -1.96
CLK1-208ENST00000464454 PYROXD1Q8WU10 500 aa2.8□□□□□ -1.96
CLK1-208ENST00000464454 ELSPBP1Q96BH3 223 aa2.8□□□□□ -1.96
CLK1-208ENST00000464454 RPUSD4Q96CM3 377 aaKnown RBP2.8□□□□□ -1.96
CLK1-208ENST00000464454 CNN2Q99439 309 aaKnown RBP2.8□□□□□ -1.96
CLK1-208ENST00000464454 FMO2Q99518 471 aa2.8□□□□□ -1.96
CLK1-208ENST00000464454 PKIBQ9C010 78 aa2.8□□□□□ -1.96
CLK1-208ENST00000464454 ROGDIQ9GZN7 287 aa2.8□□□□□ -1.96
CLK1-208ENST00000464454 RNF167Q9H6Y7 350 aa2.8□□□□□ -1.96
CLK1-208ENST00000464454 GLRX2Q9NS18 164 aa2.8□□□□□ -1.96
CLK1-208ENST00000464454 GIN1Q9NXP7 522 aa2.8□□□□□ -1.96
CLK1-208ENST00000464454 RPS6KB2Q9UBS0 482 aa2.8□□□□□ -1.96
CLK1-208ENST00000464454 MTRF1LQ9UGC7 380 aaKnown RBP2.8□□□□□ -1.96
CLK1-208ENST00000464454 IGKV6D-21A0A0A0MT36 114 aa2.79□□□□□ -1.96
CLK1-208ENST00000464454 ARHGEF35A5YM69 484 aa2.79□□□□□ -1.96
CLK1-208ENST00000464454 TRIM49D1C9J1S8 452 aa2.79□□□□□ -1.96
CLK1-208ENST00000464454 NPIPB7O75200 414 aa2.79□□□□□ -1.96
CLK1-208ENST00000464454 SERPINA3P01011 423 aa2.79□□□□□ -1.96
CLK1-208ENST00000464454 SLC2A3P11169 496 aa2.79□□□□□ -1.96
CLK1-208ENST00000464454 ICAM2P13598 275 aa2.79□□□□□ -1.96
CLK1-208ENST00000464454 ATP1B2P14415 290 aaPredicted RBP2.79□□□□□ -1.96
CLK1-208ENST00000464454 ETS2P15036 469 aa2.79□□□□□ -1.96
CLK1-208ENST00000464454 BST1Q10588 318 aa2.79□□□□□ -1.96
CLK1-208ENST00000464454 ZNF77Q15935 545 aa2.79□□□□□ -1.96
CLK1-208ENST00000464454 SSX2Q16385 188 aa2.79□□□□□ -1.96
CLK1-208ENST00000464454 PRAMEF5Q5TYX0 476 aa2.79□□□□□ -1.96
CLK1-208ENST00000464454 PRAMEF6Q5VXH4 476 aa2.79□□□□□ -1.96
CLK1-208ENST00000464454 RFLNAQ6ZTI6 216 aa2.79□□□□□ -1.96
CLK1-208ENST00000464454 TPRX1Q8N7U7 411 aa2.79□□□□□ -1.96
CLK1-208ENST00000464454 SUMF2Q8NBJ7 301 aa2.79□□□□□ -1.96
CLK1-208ENST00000464454 ARPC1AQ92747 370 aa2.79□□□□□ -1.96
CLK1-208ENST00000464454 STMN2Q93045 179 aa2.79□□□□□ -1.96
CLK1-208ENST00000464454 TPD52L3Q96J77 140 aa2.79□□□□□ -1.96
CLK1-208ENST00000464454 RASL11BQ9BPW5 248 aa2.79□□□□□ -1.96
CLK1-208ENST00000464454 TCHPQ9BT92 498 aa2.79□□□□□ -1.96
CLK1-208ENST00000464454 CHRDL1Q9BU40 450 aa2.79□□□□□ -1.96
CLK1-208ENST00000464454 RIOK2Q9BVS4 552 aaKnown RBP2.79□□□□□ -1.96
CLK1-208ENST00000464454 RANBP3Q9H6Z4 567 aaPredicted RBP2.79□□□□□ -1.96
CLK1-208ENST00000464454 MMP26Q9NRE1 261 aa2.79□□□□□ -1.96
CLK1-208ENST00000464454 PEX16Q9Y5Y5 336 aa2.79□□□□□ -1.96
CLK1-208ENST00000464454 PPIAL4EA0A075B759 164 aa2.78□□□□□ -1.96
CLK1-208ENST00000464454 GJE1A6NN92 205 aa2.78□□□□□ -1.96
CLK1-208ENST00000464454 C12orf71A8MTZ7 269 aa2.78□□□□□ -1.96
CLK1-208ENST00000464454 UBXN8O00124 270 aa2.78□□□□□ -1.96
CLK1-208ENST00000464454 OR7A10O76100 309 aa2.78□□□□□ -1.96
CLK1-208ENST00000464454 KLF8O95600 359 aaPredicted RBP2.78□□□□□ -1.96
CLK1-208ENST00000464454 NDUFB10O96000 172 aa2.78□□□□□ -1.96
CLK1-208ENST00000464454 MMP1P03956 469 aa2.78□□□□□ -1.96
CLK1-208ENST00000464454 CHTF8P0CG12 524 aa2.78□□□□□ -1.96
CLK1-208ENST00000464454 PPIAL4FP0DN26 164 aa2.78□□□□□ -1.96
CLK1-208ENST00000464454 FDFT1P37268 417 aa2.78□□□□□ -1.96
CLK1-208ENST00000464454 DAZ2Q13117 558 aaKnown RBP2.78□□□□□ -1.96
CLK1-208ENST00000464454 C1orf94Q6P1W5 598 aa2.78□□□□□ -1.96
CLK1-208ENST00000464454 ZNF620Q6ZNG0 422 aa2.78□□□□□ -1.96
CLK1-208ENST00000464454 LRRC74BQ6ZQY2 392 aa2.78□□□□□ -1.96
CLK1-208ENST00000464454 TAS2R42Q7RTR8 314 aa2.78□□□□□ -1.96
CLK1-208ENST00000464454 ZNF546Q86UE3 836 aa2.78□□□□□ -1.96
CLK1-208ENST00000464454 RALGPS2Q86X27 583 aaPredicted RBP2.78□□□□□ -1.96
CLK1-208ENST00000464454 EGFL6Q8IUX8 553 aa2.78□□□□□ -1.96
CLK1-208ENST00000464454 MFSD6LQ8IWD5 586 aa2.78□□□□□ -1.96
CLK1-208ENST00000464454 RNF175Q8N4F7 328 aa2.78□□□□□ -1.96
CLK1-208ENST00000464454 OR9K2Q8NGE7 335 aa2.78□□□□□ -1.96
CLK1-208ENST00000464454 FANK1Q8TC84 345 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms