RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 PCDHAC1Q9H158 963 aa11.39□□□□□ -0.59
XRN1-203ENST00000463916 MYLK2Q9H1R3 596 aa11.39□□□□□ -0.59
XRN1-203ENST00000463916 SLCO5A1Q9H2Y9 848 aa11.39□□□□□ -0.59
XRN1-203ENST00000463916 ESRP2Q9H6T0 727 aaKnown RBP11.39□□□□□ -0.59
XRN1-203ENST00000463916 EVA1AQ9H8M9 152 aa11.39□□□□□ -0.59
XRN1-203ENST00000463916 SELENONQ9NZV5 590 aa11.39□□□□□ -0.59
XRN1-203ENST00000463916 SH3GLB1Q9Y371 365 aa11.39□□□□□ -0.59
XRN1-203ENST00000463916 SLC25A15Q9Y619 301 aa11.39□□□□□ -0.59
XRN1-203ENST00000463916 CLOCKO15516 846 aa11.39□□□□□ -0.59
XRN1-203ENST00000463916 UPK3AO75631 287 aa11.39□□□□□ -0.59
XRN1-203ENST00000463916 ZNF432O94892 652 aa11.39□□□□□ -0.59
XRN1-203ENST00000463916 HLA-DOBP13765 273 aa11.39□□□□□ -0.59
XRN1-203ENST00000463916 CDH2P19022 906 aaPredicted RBP11.39□□□□□ -0.59
XRN1-203ENST00000463916 LSP1P33241 339 aa11.39□□□□□ -0.59
XRN1-203ENST00000463916 OR1E2P47887 323 aa11.39□□□□□ -0.59
XRN1-203ENST00000463916 CLDN17P56750 224 aa11.39□□□□□ -0.59
XRN1-203ENST00000463916 SLC25A3Q00325 362 aa11.39□□□□□ -0.59
XRN1-203ENST00000463916 SWT1Q5T5J6 900 aaKnown RBP11.39□□□□□ -0.59
XRN1-203ENST00000463916 NIPAL3Q6P499 406 aa11.39□□□□□ -0.59
XRN1-203ENST00000463916 C5orf46Q6UWT4 87 aa11.39□□□□□ -0.59
XRN1-203ENST00000463916 H1FNTQ75WM6 255 aaPredicted RBP11.39□□□□□ -0.59
XRN1-203ENST00000463916 WDFY1Q8IWB7 410 aa11.39□□□□□ -0.59
XRN1-203ENST00000463916 WFDC11Q8NEX6 87 aa11.39□□□□□ -0.59
XRN1-203ENST00000463916 SLC41A3Q96GZ6 507 aa11.39□□□□□ -0.59
XRN1-203ENST00000463916 CCL19Q99731 98 aa11.39□□□□□ -0.59
XRN1-203ENST00000463916 TMEM43Q9BTV4 400 aa11.39□□□□□ -0.59
XRN1-203ENST00000463916 C1QTNF6Q9BXI9 259 aa11.39□□□□□ -0.59
XRN1-203ENST00000463916 AMBRA1Q9C0C7 1298 aa11.39□□□□□ -0.59
XRN1-203ENST00000463916 BEX4Q9NWD9 120 aaPredicted RBP11.39□□□□□ -0.59
XRN1-203ENST00000463916 B3GALT5Q9Y2C3 310 aa11.39□□□□□ -0.59
XRN1-203ENST00000463916 RNF115Q9Y4L5 304 aa11.39□□□□□ -0.59
XRN1-203ENST00000463916 ARID1AO14497 2285 aa11.38□□□□□ -0.59
XRN1-203ENST00000463916 NF1P21359 2839 aa11.38□□□□□ -0.59
XRN1-203ENST00000463916 HS3ST1O14792 307 aa11.38□□□□□ -0.59
XRN1-203ENST00000463916 CHP2O43745 196 aa11.38□□□□□ -0.59
XRN1-203ENST00000463916 CD3EP07766 207 aa11.38□□□□□ -0.59
XRN1-203ENST00000463916 ZNF43P17038 809 aa11.38□□□□□ -0.59
XRN1-203ENST00000463916 GTF2E2P29084 291 aaKnown RBP11.38□□□□□ -0.59
XRN1-203ENST00000463916 MPGP29372 298 aa11.38□□□□□ -0.59
XRN1-203ENST00000463916 ADAM5Q6NVV9 412 aa11.38□□□□□ -0.59
XRN1-203ENST00000463916 C8orf82Q6P1X6 216 aaPredicted RBP11.38□□□□□ -0.59
XRN1-203ENST00000463916 NHLRC1Q6VVB1 395 aa11.38□□□□□ -0.59
XRN1-203ENST00000463916 C20orf204Q6ZNR8 217 aa11.38□□□□□ -0.59
XRN1-203ENST00000463916 TGIF2LYQ8IUE0 185 aa11.38□□□□□ -0.59
XRN1-203ENST00000463916 KBTBD8Q8NFY9 601 aa11.38□□□□□ -0.59
XRN1-203ENST00000463916 OR2T12Q8NG77 320 aa11.38□□□□□ -0.59
XRN1-203ENST00000463916 OXGR1Q96P68 337 aa11.38□□□□□ -0.59
XRN1-203ENST00000463916 ALKBH3Q96Q83 286 aaPredicted RBP11.38□□□□□ -0.59
XRN1-203ENST00000463916 PRSS27Q9BQR3 290 aa11.38□□□□□ -0.59
XRN1-203ENST00000463916 TMUB1Q9BVT8 246 aa11.38□□□□□ -0.59
XRN1-203ENST00000463916 NGBQ9NPG2 151 aa11.38□□□□□ -0.59
XRN1-203ENST00000463916 SLC7A7Q9UM01 511 aa11.38□□□□□ -0.59
XRN1-203ENST00000463916 SETD2Q9BYW2 2564 aaPredicted RBP11.38□□□□□ -0.59
XRN1-203ENST00000463916 FAM220BPB1ANY3 271 aa11.37□□□□□ -0.59
XRN1-203ENST00000463916 NME4O00746 187 aa11.37□□□□□ -0.59
XRN1-203ENST00000463916 TRAF3IP2O43734 574 aaPredicted RBP11.37□□□□□ -0.59
XRN1-203ENST00000463916 SNX3O60493 162 aa11.37□□□□□ -0.59
XRN1-203ENST00000463916 KDELR2P33947 212 aa11.37□□□□□ -0.59
XRN1-203ENST00000463916 ZNF83P51522 516 aa11.37□□□□□ -0.59
XRN1-203ENST00000463916 FOXD4Q12950 439 aaPredicted RBP11.37□□□□□ -0.59
XRN1-203ENST00000463916 HIKESHIQ53FT3 197 aa11.37□□□□□ -0.59
XRN1-203ENST00000463916 OR7E24Q6IFN5 339 aa11.37□□□□□ -0.59
XRN1-203ENST00000463916 ERICH5Q6P6B1 374 aa11.37□□□□□ -0.59
XRN1-203ENST00000463916 CARM1Q86X55 608 aa11.37□□□□□ -0.59
XRN1-203ENST00000463916 MICU2Q8IYU8 434 aa11.37□□□□□ -0.59
XRN1-203ENST00000463916 POMGNT2Q8NAT1 580 aa11.37□□□□□ -0.59
XRN1-203ENST00000463916 RASSF5Q8WWW0 418 aa11.37□□□□□ -0.59
XRN1-203ENST00000463916 PIGTQ969N2 578 aa11.37□□□□□ -0.59
XRN1-203ENST00000463916 PIP5K1AQ99755 562 aa11.37□□□□□ -0.59
XRN1-203ENST00000463916 ZNF426Q9BUY5 554 aa11.37□□□□□ -0.59
XRN1-203ENST00000463916 USF3Q68DE3 2245 aa11.37□□□□□ -0.59
XRN1-203ENST00000463916 LOC102725191A0A1B0GVB3 256 aa11.37□□□□□ -0.59
XRN1-203ENST00000463916 ELOVL7A1L3X0 281 aa11.37□□□□□ -0.59
XRN1-203ENST00000463916 TRAPPC13A5PLN9 417 aa11.37□□□□□ -0.59
XRN1-203ENST00000463916 GMNCA6NCL1 334 aa11.37□□□□□ -0.59
XRN1-203ENST00000463916 SHISA9B4DS77 424 aa11.37□□□□□ -0.59
XRN1-203ENST00000463916 FUT4P22083 530 aa11.37□□□□□ -0.59
XRN1-203ENST00000463916 NKX6-1P78426 367 aaPredicted RBP11.37□□□□□ -0.59
XRN1-203ENST00000463916 SPOCK1Q08629 439 aa11.37□□□□□ -0.59
XRN1-203ENST00000463916 LRRC23Q53EV4 343 aaPredicted RBP11.37□□□□□ -0.59
XRN1-203ENST00000463916 CYBRD1Q53TN4 286 aa11.37□□□□□ -0.59
XRN1-203ENST00000463916 C10orf53Q8N6V4 93 aa11.37□□□□□ -0.59
XRN1-203ENST00000463916 LRRC17Q8N6Y2 441 aa11.37□□□□□ -0.59
XRN1-203ENST00000463916 ZNF611Q8N823 705 aa11.37□□□□□ -0.59
XRN1-203ENST00000463916 OR6S1Q8NH40 331 aa11.37□□□□□ -0.59
XRN1-203ENST00000463916 PROX1Q92786 737 aa11.37□□□□□ -0.59
XRN1-203ENST00000463916 ZNF837Q96EG3 531 aaPredicted RBP11.37□□□□□ -0.59
XRN1-203ENST00000463916 EPYCQ99645 322 aa11.37□□□□□ -0.59
XRN1-203ENST00000463916 SLC17A5Q9NRA2 495 aa11.37□□□□□ -0.59
XRN1-203ENST00000463916 NIPBLQ6KC79 2804 aaeCLIP11.36□□□□□ -0.59
XRN1-203ENST00000463916 ZANQ9Y493 2812 aa11.36□□□□□ -0.59
XRN1-203ENST00000463916 KPNA4O00629 521 aaPredicted RBP11.36□□□□□ -0.59
XRN1-203ENST00000463916 ABCD4O14678 606 aa11.36□□□□□ -0.59
XRN1-203ENST00000463916 SOD3P08294 240 aa11.36□□□□□ -0.59
XRN1-203ENST00000463916 NQO1P15559 274 aaKnown RBP11.36□□□□□ -0.59
XRN1-203ENST00000463916 SLC7A2P52569 658 aa11.36□□□□□ -0.59
XRN1-203ENST00000463916 LIPEQ05469 1076 aa11.36□□□□□ -0.59
XRN1-203ENST00000463916 PIN1Q13526 163 aaPredicted RBP11.36□□□□□ -0.59
XRN1-203ENST00000463916 ZNF672Q499Z4 452 aaPredicted RBP11.36□□□□□ -0.59
XRN1-203ENST00000463916 SCAIQ8N9R8 606 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms