RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 NDE1Q9NXR1 346 aa15.62■□□□□ 0.09
VPS52-214ENST00000463486 MRPL39Q9NYK5 338 aaKnown RBP15.62■□□□□ 0.09
VPS52-214ENST00000463486 MALT1Q9UDY8 824 aa15.62■□□□□ 0.09
VPS52-214ENST00000463486 NDRG3Q9UGV2 375 aa15.62■□□□□ 0.09
VPS52-214ENST00000463486 CORINQ9Y5Q5 1042 aa15.62■□□□□ 0.09
VPS52-214ENST00000463486 A0A1W2PPR1 153 aa15.61■□□□□ 0.09
VPS52-214ENST00000463486 DEFB108AA8MXU0 73 aa15.61■□□□□ 0.09
VPS52-214ENST00000463486 J3KTA2 159 aa15.61■□□□□ 0.09
VPS52-214ENST00000463486 ZNF432O94892 652 aa15.61■□□□□ 0.09
VPS52-214ENST00000463486 IGHV3-9P01782 118 aa15.61■□□□□ 0.09
VPS52-214ENST00000463486 SEMG1P04279 462 aa15.61■□□□□ 0.09
VPS52-214ENST00000463486 CALB2P22676 271 aa15.61■□□□□ 0.09
VPS52-214ENST00000463486 LOXP28300 417 aaPredicted RBP15.61■□□□□ 0.09
VPS52-214ENST00000463486 RBM34P42696 430 aaKnown RBP15.61■□□□□ 0.09
VPS52-214ENST00000463486 UGT2B15P54855 530 aa15.61■□□□□ 0.09
VPS52-214ENST00000463486 TAS2R41P59536 307 aa15.61■□□□□ 0.09
VPS52-214ENST00000463486 ITGADQ13349 1161 aa15.61■□□□□ 0.09
VPS52-214ENST00000463486 MFSD13AQ14CX5 517 aa15.61■□□□□ 0.09
VPS52-214ENST00000463486 ZNF74Q16587 644 aa15.61■□□□□ 0.09
VPS52-214ENST00000463486 IFI44LQ53G44 452 aa15.61■□□□□ 0.09
VPS52-214ENST00000463486 TSPO2Q5TGU0 170 aa15.61■□□□□ 0.09
VPS52-214ENST00000463486 TTC33Q6PID6 262 aaPredicted RBP15.61■□□□□ 0.09
VPS52-214ENST00000463486 SEZ6L2Q6UXD5 910 aa15.61■□□□□ 0.09
VPS52-214ENST00000463486 TRPM8Q7Z2W7 1104 aa15.61■□□□□ 0.09
VPS52-214ENST00000463486 SLC46A3Q7Z3Q1 461 aa15.61■□□□□ 0.09
VPS52-214ENST00000463486 WDFY1Q8IWB7 410 aa15.61■□□□□ 0.09
VPS52-214ENST00000463486 LRRC17Q8N6Y2 441 aa15.61■□□□□ 0.09
VPS52-214ENST00000463486 SCAIQ8N9R8 606 aa15.61■□□□□ 0.09
VPS52-214ENST00000463486 TMEM255BQ8WV15 326 aa15.61■□□□□ 0.09
VPS52-214ENST00000463486 GEMIN6Q8WXD5 167 aaKnown RBP15.61■□□□□ 0.09
VPS52-214ENST00000463486 FAM162AQ96A26 154 aa15.61■□□□□ 0.09
VPS52-214ENST00000463486 LURAP1Q96LR2 239 aa15.61■□□□□ 0.09
VPS52-214ENST00000463486 PRRC1Q96M27 445 aa15.61■□□□□ 0.09
VPS52-214ENST00000463486 OXGR1Q96P68 337 aa15.61■□□□□ 0.09
VPS52-214ENST00000463486 HDHD5Q9BXW7 423 aa15.61■□□□□ 0.09
VPS52-214ENST00000463486 FANCFQ9NPI8 374 aa15.61■□□□□ 0.09
VPS52-214ENST00000463486 SLC7A10Q9NS82 523 aa15.61■□□□□ 0.09
VPS52-214ENST00000463486 PARPBPQ9NWS1 579 aa15.61■□□□□ 0.09
VPS52-214ENST00000463486 TAS2R1Q9NYW7 299 aa15.61■□□□□ 0.09
VPS52-214ENST00000463486 PLPP3O14495 311 aa15.6■□□□□ 0.09
VPS52-214ENST00000463486 ARPC2O15144 300 aa15.6■□□□□ 0.09
VPS52-214ENST00000463486 KLF4O43474 513 aa15.6■□□□□ 0.09
VPS52-214ENST00000463486 TRAF3IP2O43734 574 aaPredicted RBP15.6■□□□□ 0.09
VPS52-214ENST00000463486 MT-ATP6P00846 226 aa15.6■□□□□ 0.09
VPS52-214ENST00000463486 IGF2P01344 180 aa15.6■□□□□ 0.09
VPS52-214ENST00000463486 HRGP04196 525 aa15.6■□□□□ 0.09
VPS52-214ENST00000463486 IFNW1P05000 195 aa15.6■□□□□ 0.09
VPS52-214ENST00000463486 HLA-DOBP13765 273 aa15.6■□□□□ 0.09
VPS52-214ENST00000463486 CRYGSP22914 178 aa15.6■□□□□ 0.09
VPS52-214ENST00000463486 YAP1P46937 504 aaKnown RBP15.6■□□□□ 0.09
VPS52-214ENST00000463486 AAED1Q7RTV5 226 aa15.6■□□□□ 0.09
VPS52-214ENST00000463486 OFCC1Q8IZS5 231 aa15.6■□□□□ 0.09
VPS52-214ENST00000463486 ZNF433Q8N7K0 673 aaPredicted RBP15.6■□□□□ 0.09
VPS52-214ENST00000463486 S100PBPQ96BU1 408 aa15.6■□□□□ 0.09
VPS52-214ENST00000463486 ACTR6Q9GZN1 396 aa15.6■□□□□ 0.09
VPS52-214ENST00000463486 C20orf141Q9NUB4 165 aa15.6■□□□□ 0.09
VPS52-214ENST00000463486 TAS2R5Q9NYW4 299 aa15.6■□□□□ 0.09
VPS52-214ENST00000463486 RPS6KA6Q9UK32 745 aa15.6■□□□□ 0.09
VPS52-214ENST00000463486 MYO9AB2RTY4 2548 aa15.6■□□□□ 0.09
VPS52-214ENST00000463486 ROS1P08922 2347 aa15.6■□□□□ 0.09
VPS52-214ENST00000463486 KPNA4O00629 521 aaPredicted RBP15.59■□□□□ 0.09
VPS52-214ENST00000463486 LYZL6O75951 148 aa15.59■□□□□ 0.09
VPS52-214ENST00000463486 CH25HO95992 272 aa15.59■□□□□ 0.09
VPS52-214ENST00000463486 MT-ND1P03886 318 aa15.59■□□□□ 0.09
VPS52-214ENST00000463486 ITGA5P08648 1049 aa15.59■□□□□ 0.09
VPS52-214ENST00000463486 TSPAN19P0C672 248 aa15.59■□□□□ 0.09
VPS52-214ENST00000463486 ASAH2BP0C7U1 165 aa15.59■□□□□ 0.09
VPS52-214ENST00000463486 PPP3CBP16298 524 aa15.59■□□□□ 0.09
VPS52-214ENST00000463486 SELENOPP49908 381 aa15.59■□□□□ 0.09
VPS52-214ENST00000463486 LGALS3BPQ08380 585 aa15.59■□□□□ 0.09
VPS52-214ENST00000463486 CASP12Q6UXS9 341 aa15.59■□□□□ 0.09
VPS52-214ENST00000463486 LINGO2Q7L985 606 aa15.59■□□□□ 0.09
VPS52-214ENST00000463486 STEAP2Q8NFT2 490 aa15.59■□□□□ 0.09
VPS52-214ENST00000463486 PFN4Q8NHR9 129 aa15.59■□□□□ 0.09
VPS52-214ENST00000463486 TMEM239Q8WW34 195 aa15.59■□□□□ 0.09
VPS52-214ENST00000463486 MED18Q9BUE0 208 aa15.59■□□□□ 0.09
VPS52-214ENST00000463486 C1orf21Q9H246 121 aa15.59■□□□□ 0.09
VPS52-214ENST00000463486 NDUFAF4Q9P032 175 aa15.59■□□□□ 0.09
VPS52-214ENST00000463486 RHCGQ9UBD6 479 aa15.59■□□□□ 0.09
VPS52-214ENST00000463486 MAGEL2Q9UJ55 1249 aa15.59■□□□□ 0.09
VPS52-214ENST00000463486 ENPP4Q9Y6X5 453 aa15.59■□□□□ 0.09
VPS52-214ENST00000463486 CREBBPQ92793 2442 aa15.59■□□□□ 0.09
VPS52-214ENST00000463486 MAP1AP78559 2803 aaPredicted RBP15.58■□□□□ 0.09
VPS52-214ENST00000463486 ENO4A6NNW6 628 aa15.58■□□□□ 0.08
VPS52-214ENST00000463486 UBOX5O94941 541 aa15.58■□□□□ 0.08
VPS52-214ENST00000463486 GOSR1O95249 250 aa15.58■□□□□ 0.08
VPS52-214ENST00000463486 MXRA7P84157 204 aa15.58■□□□□ 0.08
VPS52-214ENST00000463486 VLDLRP98155 873 aa15.58■□□□□ 0.08
VPS52-214ENST00000463486 ST3GAL3Q11203 375 aa15.58■□□□□ 0.08
VPS52-214ENST00000463486 ZP4Q12836 540 aa15.58■□□□□ 0.08
VPS52-214ENST00000463486 PMS2P3Q13401 168 aa15.58■□□□□ 0.08
VPS52-214ENST00000463486 TAB1Q15750 504 aa15.58■□□□□ 0.08
VPS52-214ENST00000463486 FKBP9P1Q75LS8 142 aa15.58■□□□□ 0.08
VPS52-214ENST00000463486 BHLHA15Q7RTS1 189 aaPredicted RBP15.58■□□□□ 0.08
VPS52-214ENST00000463486 TMEM123Q8N131 208 aa15.58■□□□□ 0.08
VPS52-214ENST00000463486 ARHGAP24Q8N264 748 aa15.58■□□□□ 0.08
VPS52-214ENST00000463486 PIK3C3Q8NEB9 887 aa15.58■□□□□ 0.08
VPS52-214ENST00000463486 OR5J2Q8NH18 312 aa15.58■□□□□ 0.08
VPS52-214ENST00000463486 LIPHQ8WWY8 451 aa15.58■□□□□ 0.08
VPS52-214ENST00000463486 KISS1RQ969F8 398 aaPredicted RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms