RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 FAM183AA6NL82 134 aa9.02□□□□□ -0.97
PTPRD-207ENST00000463477 TGFBR3LH3BV60 316 aa9.02□□□□□ -0.97
PTPRD-207ENST00000463477 I3L1I5 382 aaPredicted RBP9.02□□□□□ -0.97
PTPRD-207ENST00000463477 CASKO14936 926 aa9.02□□□□□ -0.97
PTPRD-207ENST00000463477 IGKV1D-16P01601 117 aa9.02□□□□□ -0.97
PTPRD-207ENST00000463477 IGHEP01854 428 aa9.02□□□□□ -0.97
PTPRD-207ENST00000463477 MT-ND5P03915 603 aa9.02□□□□□ -0.97
PTPRD-207ENST00000463477 SBK2P0C263 348 aa9.02□□□□□ -0.97
PTPRD-207ENST00000463477 SAGP10523 405 aaPredicted RBP9.02□□□□□ -0.97
PTPRD-207ENST00000463477 FBLP22087 321 aaKnown RBP9.02□□□□□ -0.97
PTPRD-207ENST00000463477 ADH7P40394 386 aa9.02□□□□□ -0.97
PTPRD-207ENST00000463477 CASP3P42574 277 aa9.02□□□□□ -0.97
PTPRD-207ENST00000463477 RFX2P48378 723 aa9.02□□□□□ -0.97
PTPRD-207ENST00000463477 CD300CQ08708 224 aa9.02□□□□□ -0.97
PTPRD-207ENST00000463477 STX4Q12846 297 aa9.02□□□□□ -0.97
PTPRD-207ENST00000463477 SERTAD2Q14140 314 aa9.02□□□□□ -0.97
PTPRD-207ENST00000463477 BAK1Q16611 211 aa9.02□□□□□ -0.97
PTPRD-207ENST00000463477 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.02□□□□□ -0.97
PTPRD-207ENST00000463477 ZNF791Q3KP31 576 aaPredicted RBP9.02□□□□□ -0.97
PTPRD-207ENST00000463477 ZNF544Q6NX49 715 aa9.02□□□□□ -0.97
PTPRD-207ENST00000463477 TMEM91Q6ZNR0 172 aa9.02□□□□□ -0.97
PTPRD-207ENST00000463477 KLBQ86Z14 1044 aa9.02□□□□□ -0.97
PTPRD-207ENST00000463477 UBQLNLQ8IYU4 475 aa9.02□□□□□ -0.97
PTPRD-207ENST00000463477 METTL27Q8N6F8 245 aaPredicted RBP9.02□□□□□ -0.97
PTPRD-207ENST00000463477 TEX19Q8NA77 164 aa9.02□□□□□ -0.97
PTPRD-207ENST00000463477 OR13C2Q8NGS9 318 aa9.02□□□□□ -0.97
PTPRD-207ENST00000463477 ITFG2Q969R8 447 aa9.02□□□□□ -0.97
PTPRD-207ENST00000463477 DGAT2Q96PD7 388 aa9.02□□□□□ -0.97
PTPRD-207ENST00000463477 ATF6BQ99941 703 aa9.02□□□□□ -0.97
PTPRD-207ENST00000463477 SEMA4CQ9C0C4 833 aa9.02□□□□□ -0.97
PTPRD-207ENST00000463477 SLC22A4Q9H015 551 aa9.02□□□□□ -0.97
PTPRD-207ENST00000463477 PPP1R3EQ9H7J1 279 aa9.02□□□□□ -0.97
PTPRD-207ENST00000463477 MOV10Q9HCE1 1003 aaKnown RBP9.02□□□□□ -0.97
PTPRD-207ENST00000463477 MKKSQ9NPJ1 570 aaPredicted RBP9.02□□□□□ -0.97
PTPRD-207ENST00000463477 C14orf119Q9NWQ9 140 aa9.02□□□□□ -0.97
PTPRD-207ENST00000463477 CTSFQ9UBX1 484 aa9.02□□□□□ -0.97
PTPRD-207ENST00000463477 PRODH2Q9UF12 536 aa9.02□□□□□ -0.97
PTPRD-207ENST00000463477 IL20RAQ9UHF4 553 aa9.02□□□□□ -0.97
PTPRD-207ENST00000463477 PCDHGB7Q9Y5F8 929 aa9.02□□□□□ -0.97
PTPRD-207ENST00000463477 NOX1Q9Y5S8 564 aa9.02□□□□□ -0.97
PTPRD-207ENST00000463477 MED13Q9UHV7 2174 aa9.02□□□□□ -0.97
PTPRD-207ENST00000463477 CFAP46Q8IYW2 2715 aa9.01□□□□□ -0.97
PTPRD-207ENST00000463477 BOD1L1Q8NFC6 3051 aa9.01□□□□□ -0.97
PTPRD-207ENST00000463477 BSNQ9UPA5 3926 aa9.01□□□□□ -0.97
PTPRD-207ENST00000463477 A0A1W2PQ09 198 aa9.01□□□□□ -0.97
PTPRD-207ENST00000463477 DAPL1A0PJW8 107 aa9.01□□□□□ -0.97
PTPRD-207ENST00000463477 SLC19A2O60779 497 aa9.01□□□□□ -0.97
PTPRD-207ENST00000463477 NDUFB2O95178 105 aa9.01□□□□□ -0.97
PTPRD-207ENST00000463477 CD1AP06126 327 aa9.01□□□□□ -0.97
PTPRD-207ENST00000463477 CSF3P09919 207 aa9.01□□□□□ -0.97
PTPRD-207ENST00000463477 CT45A8P0DMV1 189 aa9.01□□□□□ -0.97
PTPRD-207ENST00000463477 CT45A9P0DMV2 189 aa9.01□□□□□ -0.97
PTPRD-207ENST00000463477 TGM4P49221 684 aa9.01□□□□□ -0.97
PTPRD-207ENST00000463477 EVX1P49640 407 aa9.01□□□□□ -0.97
PTPRD-207ENST00000463477 TMED10P49755 219 aaKnown RBP9.01□□□□□ -0.97
PTPRD-207ENST00000463477 RRADP55042 308 aa9.01□□□□□ -0.97
PTPRD-207ENST00000463477 TPTEP56180 551 aa9.01□□□□□ -0.97
PTPRD-207ENST00000463477 GGTLC2Q14390 218 aa9.01□□□□□ -0.97
PTPRD-207ENST00000463477 CT45A2Q5DJT8 189 aa9.01□□□□□ -0.97
PTPRD-207ENST00000463477 VWA2Q5GFL6 755 aa9.01□□□□□ -0.97
PTPRD-207ENST00000463477 ZMAT1Q5H9K5 638 aa9.01□□□□□ -0.97
PTPRD-207ENST00000463477 ALG10BQ5I7T1 473 aa9.01□□□□□ -0.97
PTPRD-207ENST00000463477 NPSR1Q6W5P4 371 aa9.01□□□□□ -0.97
PTPRD-207ENST00000463477 NRARPQ7Z6K4 114 aa9.01□□□□□ -0.97
PTPRD-207ENST00000463477 OAFQ86UD1 273 aa9.01□□□□□ -0.97
PTPRD-207ENST00000463477 TPRA1Q86W33 373 aa9.01□□□□□ -0.97
PTPRD-207ENST00000463477 SHISA5Q8N114 240 aa9.01□□□□□ -0.97
PTPRD-207ENST00000463477 TMEM99Q8N816 258 aa9.01□□□□□ -0.97
PTPRD-207ENST00000463477 POMGNT2Q8NAT1 580 aa9.01□□□□□ -0.97
PTPRD-207ENST00000463477 FAM71CQ8NEG0 241 aa9.01□□□□□ -0.97
PTPRD-207ENST00000463477 OR7G1Q8NGA0 311 aa9.01□□□□□ -0.97
PTPRD-207ENST00000463477 ABHD17AQ96GS6 310 aa9.01□□□□□ -0.97
PTPRD-207ENST00000463477 ZC3HAV1LQ96H79 300 aaKnown RBP9.01□□□□□ -0.97
PTPRD-207ENST00000463477 FER1L6-AS2Q96M78 137 aa9.01□□□□□ -0.97
PTPRD-207ENST00000463477 HOXD1Q9GZZ0 328 aa9.01□□□□□ -0.97
PTPRD-207ENST00000463477 SLC25A18Q9H1K4 315 aa9.01□□□□□ -0.97
PTPRD-207ENST00000463477 ADGRL4Q9HBW9 690 aa9.01□□□□□ -0.97
PTPRD-207ENST00000463477 MCCC2Q9HCC0 563 aa9.01□□□□□ -0.97
PTPRD-207ENST00000463477 INIPQ9NRY2 104 aa9.01□□□□□ -0.97
PTPRD-207ENST00000463477 CHRNA9Q9UGM1 479 aa9.01□□□□□ -0.97
PTPRD-207ENST00000463477 A0A087WUJ7 227 aa9□□□□□ -0.97
PTPRD-207ENST00000463477 ANKRD61A6NGH8 418 aa9□□□□□ -0.97
PTPRD-207ENST00000463477 SERINC4A6NH21 518 aa9□□□□□ -0.97
PTPRD-207ENST00000463477 ARGFXA6NJG6 315 aa9□□□□□ -0.97
PTPRD-207ENST00000463477 MKRN2OSH3BPM6 223 aa9□□□□□ -0.97
PTPRD-207ENST00000463477 ARPC3O15145 178 aa9□□□□□ -0.97
PTPRD-207ENST00000463477 IDH3BO43837 385 aa9□□□□□ -0.97
PTPRD-207ENST00000463477 TMCC2O75069 709 aa9□□□□□ -0.97
PTPRD-207ENST00000463477 ADAM11O75078 769 aa9□□□□□ -0.97
PTPRD-207ENST00000463477 SC5DO75845 299 aa9□□□□□ -0.97
PTPRD-207ENST00000463477 CEACAM4O75871 244 aa9□□□□□ -0.97
PTPRD-207ENST00000463477 FUT1P19526 365 aa9□□□□□ -0.97
PTPRD-207ENST00000463477 LCN1P31025 176 aa9□□□□□ -0.97
PTPRD-207ENST00000463477 SSTR4P31391 388 aa9□□□□□ -0.97
PTPRD-207ENST00000463477 OTX2P32243 289 aa9□□□□□ -0.97
PTPRD-207ENST00000463477 HTR3AP46098 478 aa9□□□□□ -0.97
PTPRD-207ENST00000463477 SOX8P57073 446 aa9□□□□□ -0.97
PTPRD-207ENST00000463477 FOXL2P58012 376 aa9□□□□□ -0.97
PTPRD-207ENST00000463477 OR2B6P58173 313 aa9□□□□□ -0.97
PTPRD-207ENST00000463477 SLC35F1Q5T1Q4 408 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms