RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 ZNF43P17038 809 aa11.53□□□□□ -0.56
R3HDM1-213ENST00000463230 FXNQ16595 210 aa11.53□□□□□ -0.56
R3HDM1-213ENST00000463230 SAMD4BQ5PRF9 694 aaKnown RBP11.53□□□□□ -0.56
R3HDM1-213ENST00000463230 RBM45Q8IUH3 476 aaKnown RBP11.53□□□□□ -0.56
R3HDM1-213ENST00000463230 EPHX4Q8IUS5 362 aa11.53□□□□□ -0.56
R3HDM1-213ENST00000463230 PRRC1Q96M27 445 aa11.53□□□□□ -0.56
R3HDM1-213ENST00000463230 ZNF229Q9UJW7 825 aa11.53□□□□□ -0.56
R3HDM1-213ENST00000463230 NOX1Q9Y5S8 564 aa11.53□□□□□ -0.56
R3HDM1-213ENST00000463230 NBPF19A0A087WUL8 3843 aa11.53□□□□□ -0.56
R3HDM1-213ENST00000463230 FBN2P35556 2912 aa11.53□□□□□ -0.56
R3HDM1-213ENST00000463230 HAX1O00165 279 aa11.52□□□□□ -0.56
R3HDM1-213ENST00000463230 KLF4O43474 513 aa11.52□□□□□ -0.56
R3HDM1-213ENST00000463230 THY1P04216 161 aa11.52□□□□□ -0.56
R3HDM1-213ENST00000463230 IFNW1P05000 195 aa11.52□□□□□ -0.56
R3HDM1-213ENST00000463230 MPGP29372 298 aa11.52□□□□□ -0.56
R3HDM1-213ENST00000463230 NTF4P34130 210 aa11.52□□□□□ -0.56
R3HDM1-213ENST00000463230 PMS2P3Q13401 168 aa11.52□□□□□ -0.56
R3HDM1-213ENST00000463230 C1DQ13901 141 aaKnown RBP11.52□□□□□ -0.56
R3HDM1-213ENST00000463230 IFI44LQ53G44 452 aa11.52□□□□□ -0.56
R3HDM1-213ENST00000463230 PAMR1Q6UXH9 720 aa11.52□□□□□ -0.56
R3HDM1-213ENST00000463230 DEF8Q6ZN54 512 aa11.52□□□□□ -0.56
R3HDM1-213ENST00000463230 MBD6Q96DN6 1003 aa11.52□□□□□ -0.56
R3HDM1-213ENST00000463230 MUCL1Q96DR8 90 aa11.52□□□□□ -0.56
R3HDM1-213ENST00000463230 TPD52L3Q96J77 140 aa11.52□□□□□ -0.56
R3HDM1-213ENST00000463230 PRSS27Q9BQR3 290 aa11.52□□□□□ -0.56
R3HDM1-213ENST00000463230 PLEKHF2Q9H8W4 249 aa11.52□□□□□ -0.56
R3HDM1-213ENST00000463230 ARL8BQ9NVJ2 186 aa11.52□□□□□ -0.56
R3HDM1-213ENST00000463230 ADA2Q9NZK5 511 aa11.52□□□□□ -0.56
R3HDM1-213ENST00000463230 B3GAT1Q9P2W7 334 aa11.52□□□□□ -0.56
R3HDM1-213ENST00000463230 RIMS3Q9UJD0 308 aa11.52□□□□□ -0.56
R3HDM1-213ENST00000463230 OR5H1A6NKK0 313 aa11.52□□□□□ -0.57
R3HDM1-213ENST00000463230 ENO4A6NNW6 628 aa11.52□□□□□ -0.57
R3HDM1-213ENST00000463230 EDNRAP25101 427 aa11.52□□□□□ -0.57
R3HDM1-213ENST00000463230 LOXP28300 417 aaPredicted RBP11.52□□□□□ -0.57
R3HDM1-213ENST00000463230 SH3BGRP55822 239 aaPredicted RBP11.52□□□□□ -0.57
R3HDM1-213ENST00000463230 ST3GAL3Q11203 375 aa11.52□□□□□ -0.57
R3HDM1-213ENST00000463230 ZP4Q12836 540 aa11.52□□□□□ -0.57
R3HDM1-213ENST00000463230 ZNF74Q16587 644 aa11.52□□□□□ -0.57
R3HDM1-213ENST00000463230 ANKRD34AQ69YU3 496 aa11.52□□□□□ -0.57
R3HDM1-213ENST00000463230 WDR88Q6ZMY6 472 aa11.52□□□□□ -0.57
R3HDM1-213ENST00000463230 PXKQ7Z7A4 578 aa11.52□□□□□ -0.57
R3HDM1-213ENST00000463230 UEVLDQ8IX04 471 aa11.52□□□□□ -0.57
R3HDM1-213ENST00000463230 ARHGAP24Q8N264 748 aa11.52□□□□□ -0.57
R3HDM1-213ENST00000463230 C10orf53Q8N6V4 93 aa11.52□□□□□ -0.57
R3HDM1-213ENST00000463230 OR5J2Q8NH18 312 aa11.52□□□□□ -0.57
R3HDM1-213ENST00000463230 FAM162AQ96A26 154 aa11.52□□□□□ -0.57
R3HDM1-213ENST00000463230 PIK3IP1Q96FE7 263 aa11.52□□□□□ -0.57
R3HDM1-213ENST00000463230 MUS81Q96NY9 551 aa11.52□□□□□ -0.57
R3HDM1-213ENST00000463230 ZNF385AQ96PM9 386 aaKnown RBP11.52□□□□□ -0.57
R3HDM1-213ENST00000463230 OBP2BQ9NPH6 170 aa11.52□□□□□ -0.57
R3HDM1-213ENST00000463230 ST6GALNAC2Q9UJ37 374 aa11.52□□□□□ -0.57
R3HDM1-213ENST00000463230 MAGEL2Q9UJ55 1249 aa11.52□□□□□ -0.57
R3HDM1-213ENST00000463230 SIAH2O43255 324 aa11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 TMCC2O75069 709 aa11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 LYZL6O75951 148 aa11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 DNASE1P24855 282 aa11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 DNAJA1P31689 397 aaKnown RBP11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 PUDPQ08623 228 aa11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 FAPQ12884 760 aa11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 TAB1Q15750 504 aa11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 TSPO2Q5TGU0 170 aa11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 TSPYL5Q86VY4 417 aaPredicted RBP11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 OFCC1Q8IZS5 231 aa11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 LIPHQ8WWY8 451 aa11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 ZC3HAV1LQ96H79 300 aaKnown RBP11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 TMEM204Q9BSN7 226 aa11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 ANKRD19PQ9H560 264 aa11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 GORASP2Q9H8Y8 452 aa11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 MOV10Q9HCE1 1003 aaKnown RBP11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 SLC7A10Q9NS82 523 aa11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 ADAM21Q9UKJ8 722 aa11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 SAMD4AQ9UPU9 718 aaKnown RBP11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 AMDHD2Q9Y303 409 aa11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 ANKRD17O75179 2603 aaKnown RBP11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 CIB4A0PJX0 185 aa11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 ZNF587BE7ETH6 402 aa11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 RPL36A-HNRNPH2H7BZ11 118 aa11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 PLPP3O14495 311 aa11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 TRAF3IP2O43734 574 aaPredicted RBP11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 SLC43A1O75387 559 aa11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 ZNF432O94892 652 aa11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 ZNF682O95780 498 aa11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 SERPINA1P01009 418 aa11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 RAF1P04049 648 aa11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 HIST1H2ABP04908 130 aa11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 ITGA5P08648 1049 aa11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 NQO1P15559 274 aaKnown RBP11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 LTBQ06643 244 aa11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 PPA1Q15181 289 aa11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 STK11Q15831 433 aa11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 C22orf34Q6ZV56 151 aa11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 HIST3H2AQ7L7L0 130 aa11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 CYP4Z1Q86W10 505 aa11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 WFDC8Q8IUA0 241 aa11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 PIK3C3Q8NEB9 887 aa11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 HIST1H2ACQ93077 130 aa11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 NSL1Q96IY1 281 aa11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 LRR1Q96L50 414 aa11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 MOGAT1Q96PD6 335 aa11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 ESRP2Q9H6T0 727 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms