RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 RPS4Y2Q8TD47 263 aa16.89■□□□□ 0.29
HPS3-204ENST00000462030 HIST1H2ACQ93077 130 aa16.89■□□□□ 0.29
HPS3-204ENST00000462030 PMEPA1Q969W9 287 aa16.89■□□□□ 0.29
HPS3-204ENST00000462030 RASD2Q96D21 266 aa16.89■□□□□ 0.29
HPS3-204ENST00000462030 TM4SF19Q96DZ7 209 aa16.89■□□□□ 0.29
HPS3-204ENST00000462030 AIFM2Q9BRQ8 373 aa16.89■□□□□ 0.29
HPS3-204ENST00000462030 RNF208Q9H0X6 261 aa16.89■□□□□ 0.29
HPS3-204ENST00000462030 MED9Q9NWA0 146 aa16.89■□□□□ 0.29
HPS3-204ENST00000462030 DNAJB12Q9NXW2 375 aaKnown RBP16.89■□□□□ 0.29
HPS3-204ENST00000462030 TBC1D29Q9UFV1 150 aa16.89■□□□□ 0.29
HPS3-204ENST00000462030 A0A087WV62 115 aa16.88■□□□□ 0.29
HPS3-204ENST00000462030 ACOT7O00154 380 aa16.88■□□□□ 0.29
HPS3-204ENST00000462030 RP2O75695 350 aa16.88■□□□□ 0.29
HPS3-204ENST00000462030 RPP14O95059 124 aaKnown RBP16.88■□□□□ 0.29
HPS3-204ENST00000462030 ADRA2CP18825 462 aa16.88■□□□□ 0.29
HPS3-204ENST00000462030 ADH7P40394 386 aa16.88■□□□□ 0.29
HPS3-204ENST00000462030 MGAT2Q10469 447 aa16.88■□□□□ 0.29
HPS3-204ENST00000462030 ILF3Q12906 894 aaKnown RBP eCLIP16.88■□□□□ 0.29
HPS3-204ENST00000462030 FAM53BQ14153 422 aa16.88■□□□□ 0.29
HPS3-204ENST00000462030 C2orf27AQ580R0 203 aa16.88■□□□□ 0.29
HPS3-204ENST00000462030 FAM78AQ5JUQ0 283 aa16.88■□□□□ 0.29
HPS3-204ENST00000462030 KIRREL2Q6UWL6 708 aa16.88■□□□□ 0.29
HPS3-204ENST00000462030 STAC2Q6ZMT1 411 aa16.88■□□□□ 0.29
HPS3-204ENST00000462030 STPG2Q8N412 459 aa16.88■□□□□ 0.29
HPS3-204ENST00000462030 ESX1Q8N693 406 aa16.88■□□□□ 0.29
HPS3-204ENST00000462030 MYADMQ96S97 322 aa16.88■□□□□ 0.29
HPS3-204ENST00000462030 FGF22Q9HCT0 170 aa16.88■□□□□ 0.29
HPS3-204ENST00000462030 OPN4Q9UHM6 478 aa16.88■□□□□ 0.29
HPS3-204ENST00000462030 ANXA2P2A6NMY6 339 aa16.88■□□□□ 0.29
HPS3-204ENST00000462030 A8MXK9 166 aa16.88■□□□□ 0.29
HPS3-204ENST00000462030 NUPL2O15504 423 aaKnown RBP16.88■□□□□ 0.29
HPS3-204ENST00000462030 HNRNPA1P09651 372 aaKnown RBP eCLIP16.88■□□□□ 0.29
HPS3-204ENST00000462030 RAB40ALP0C0E4 278 aa16.88■□□□□ 0.29
HPS3-204ENST00000462030 RBM34P42696 430 aaKnown RBP16.88■□□□□ 0.29
HPS3-204ENST00000462030 SOX2P48431 317 aa16.88■□□□□ 0.29
HPS3-204ENST00000462030 MECP2P51608 486 aaKnown RBP16.88■□□□□ 0.29
HPS3-204ENST00000462030 ART1P52961 327 aa16.88■□□□□ 0.29
HPS3-204ENST00000462030 LGALS3BPQ08380 585 aa16.88■□□□□ 0.29
HPS3-204ENST00000462030 MELKQ14680 651 aa16.88■□□□□ 0.29
HPS3-204ENST00000462030 VITQ6UXI7 678 aa16.88■□□□□ 0.29
HPS3-204ENST00000462030 CFAP77Q6ZQR2 320 aa16.88■□□□□ 0.29
HPS3-204ENST00000462030 SCARB1Q8WTV0 552 aa16.88■□□□□ 0.29
HPS3-204ENST00000462030 ZNF296Q8WUU4 475 aaPredicted RBP16.88■□□□□ 0.29
HPS3-204ENST00000462030 RAB40AQ8WXH6 277 aa16.88■□□□□ 0.29
HPS3-204ENST00000462030 ARL6Q9H0F7 186 aa16.88■□□□□ 0.29
HPS3-204ENST00000462030 FBXL21Q9UKT6 434 aa16.88■□□□□ 0.29
HPS3-204ENST00000462030 FXYD6-FXYD2A0A087WZ82 144 aa16.87■□□□□ 0.29
HPS3-204ENST00000462030 ZNF35P13682 527 aa16.87■□□□□ 0.29
HPS3-204ENST00000462030 RIPPLY1Q0D2K3 151 aa16.87■□□□□ 0.29
HPS3-204ENST00000462030 IL10RAQ13651 578 aa16.87■□□□□ 0.29
HPS3-204ENST00000462030 SPRED2Q7Z698 418 aa16.87■□□□□ 0.29
HPS3-204ENST00000462030 OR4N2Q8NGD1 307 aa16.87■□□□□ 0.29
HPS3-204ENST00000462030 ZDHHC1Q8WTX9 485 aa16.87■□□□□ 0.29
HPS3-204ENST00000462030 MIB2Q96AX9 1013 aa16.87■□□□□ 0.29
HPS3-204ENST00000462030 FXYD6Q9H0Q3 95 aa16.87■□□□□ 0.29
HPS3-204ENST00000462030 TTYH1Q9H313 450 aaPredicted RBP16.87■□□□□ 0.29
HPS3-204ENST00000462030 PFDN2Q9UHV9 154 aa16.87■□□□□ 0.29
HPS3-204ENST00000462030 COLEC10Q9Y6Z7 277 aa16.87■□□□□ 0.29
HPS3-204ENST00000462030 A0A1B0GTQ1 180 aa16.87■□□□□ 0.29
HPS3-204ENST00000462030 IFNA16P05015 189 aa16.87■□□□□ 0.29
HPS3-204ENST00000462030 ICAM2P13598 275 aa16.87■□□□□ 0.29
HPS3-204ENST00000462030 GABRA1P14867 456 aa16.87■□□□□ 0.29
HPS3-204ENST00000462030 CTNNB1P35222 781 aa16.87■□□□□ 0.29
HPS3-204ENST00000462030 MRPS10P82664 201 aaKnown RBP16.87■□□□□ 0.29
HPS3-204ENST00000462030 ZNF273Q14593 569 aa16.87■□□□□ 0.29
HPS3-204ENST00000462030 OR7E24Q6IFN5 339 aa16.87■□□□□ 0.29
HPS3-204ENST00000462030 PSRC1Q6PGN9 363 aaPredicted RBP16.87■□□□□ 0.29
HPS3-204ENST00000462030 LINC00114Q6XXX2 140 aa16.87■□□□□ 0.29
HPS3-204ENST00000462030 DGAT2L6Q6ZPD8 337 aa16.87■□□□□ 0.29
HPS3-204ENST00000462030 SLC35F3Q8IY50 421 aa16.87■□□□□ 0.29
HPS3-204ENST00000462030 C12orf76Q8N812 135 aaPredicted RBP16.87■□□□□ 0.29
HPS3-204ENST00000462030 OR52H1Q8NGJ2 320 aa16.87■□□□□ 0.29
HPS3-204ENST00000462030 FLVCR1-AS1Q8TAF5 88 aa16.87■□□□□ 0.29
HPS3-204ENST00000462030 PNPLA2Q96AD5 504 aa16.87■□□□□ 0.29
HPS3-204ENST00000462030 LRFN5Q96NI6 719 aa16.87■□□□□ 0.29
HPS3-204ENST00000462030 AK1P00568 194 aa16.86■□□□□ 0.29
HPS3-204ENST00000462030 IGKV1D-16P01601 117 aa16.86■□□□□ 0.29
HPS3-204ENST00000462030 OR8G3PP0DMU2 310 aa16.86■□□□□ 0.29
HPS3-204ENST00000462030 CALCBP10092 127 aa16.86■□□□□ 0.29
HPS3-204ENST00000462030 ITPKBP27987 946 aa16.86■□□□□ 0.29
HPS3-204ENST00000462030 ERVK-25P63136 954 aa16.86■□□□□ 0.29
HPS3-204ENST00000462030 SGCGQ13326 291 aa16.86■□□□□ 0.29
HPS3-204ENST00000462030 ZMYND11Q15326 602 aa16.86■□□□□ 0.29
HPS3-204ENST00000462030 DEFB115Q30KQ5 88 aa16.86■□□□□ 0.29
HPS3-204ENST00000462030 NDUFAF6Q330K2 333 aa16.86■□□□□ 0.29
HPS3-204ENST00000462030 DCAF12L2Q5VW00 463 aa16.86■□□□□ 0.29
HPS3-204ENST00000462030 SLC36A1Q7Z2H8 476 aa16.86■□□□□ 0.29
HPS3-204ENST00000462030 DND1Q8IYX4 353 aaKnown RBP16.86■□□□□ 0.29
HPS3-204ENST00000462030 SLC43A2Q8N370 569 aa16.86■□□□□ 0.29
HPS3-204ENST00000462030 SP7Q8TDD2 431 aaPredicted RBP16.86■□□□□ 0.29
HPS3-204ENST00000462030 SGTBQ96EQ0 304 aa16.86■□□□□ 0.29
HPS3-204ENST00000462030 Q96M85 177 aa16.86■□□□□ 0.29
HPS3-204ENST00000462030 TRIM2Q9C040 744 aa16.86■□□□□ 0.29
HPS3-204ENST00000462030 SRMSQ9H3Y6 488 aa16.86■□□□□ 0.29
HPS3-204ENST00000462030 TCF7L1Q9HCS4 588 aa16.86■□□□□ 0.29
HPS3-204ENST00000462030 DPP7Q9UHL4 492 aa16.86■□□□□ 0.29
HPS3-204ENST00000462030 RWDD3Q9Y3V2 267 aa16.86■□□□□ 0.29
HPS3-204ENST00000462030 CHURC1-FNTBB4DL54 471 aa16.86■□□□□ 0.29
HPS3-204ENST00000462030 KRBOX1C9JBD0 128 aa16.86■□□□□ 0.29
HPS3-204ENST00000462030 PPP3CBP16298 524 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms