RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 NSDHLQ15738 373 aa2.17□□□□□ -2.06
HDAC6-212ENST00000461608 OR2G6Q5TZ20 316 aa2.17□□□□□ -2.06
HDAC6-212ENST00000461608 OTPQ5XKR4 325 aa2.17□□□□□ -2.06
HDAC6-212ENST00000461608 TMEM107Q6UX40 140 aa2.17□□□□□ -2.06
HDAC6-212ENST00000461608 CCDC73Q6ZRK6 1079 aa2.17□□□□□ -2.06
HDAC6-212ENST00000461608 SLC25A48Q6ZT89 311 aaKnown RBP2.17□□□□□ -2.06
HDAC6-212ENST00000461608 ZNF571Q7Z3V5 609 aaPredicted RBP2.17□□□□□ -2.06
HDAC6-212ENST00000461608 CTAGE6Q86UF2 777 aa2.17□□□□□ -2.06
HDAC6-212ENST00000461608 PSTKQ8IV42 348 aaKnown RBP2.17□□□□□ -2.06
HDAC6-212ENST00000461608 ERI1Q8IV48 349 aaKnown RBP2.17□□□□□ -2.06
HDAC6-212ENST00000461608 SLC22A9Q8IVM8 553 aa2.17□□□□□ -2.06
HDAC6-212ENST00000461608 SPAG16Q8N0X2 631 aa2.17□□□□□ -2.06
HDAC6-212ENST00000461608 ACOT4Q8N9L9 421 aa2.17□□□□□ -2.06
HDAC6-212ENST00000461608 OR4C5Q8NGB2 326 aa2.17□□□□□ -2.06
HDAC6-212ENST00000461608 GPR151Q8TDV0 419 aa2.17□□□□□ -2.06
HDAC6-212ENST00000461608 PIBF1Q8WXW3 757 aa2.17□□□□□ -2.06
HDAC6-212ENST00000461608 ITCHQ96J02 903 aa2.17□□□□□ -2.06
HDAC6-212ENST00000461608 KCNA7Q96RP8 456 aa2.17□□□□□ -2.06
HDAC6-212ENST00000461608 SH3GL1Q99961 368 aa2.17□□□□□ -2.06
HDAC6-212ENST00000461608 NRIP2Q9BQI9 281 aa2.17□□□□□ -2.06
HDAC6-212ENST00000461608 MRPL45Q9BRJ2 306 aaKnown RBP2.17□□□□□ -2.06
HDAC6-212ENST00000461608 YTHDF1Q9BYJ9 559 aaKnown RBP2.17□□□□□ -2.06
HDAC6-212ENST00000461608 PPA2Q9H2U2 334 aa2.17□□□□□ -2.06
HDAC6-212ENST00000461608 ASB8Q9H765 288 aa2.17□□□□□ -2.06
HDAC6-212ENST00000461608 EXD2Q9NVH0 621 aa2.17□□□□□ -2.06
HDAC6-212ENST00000461608 AIG1Q9NVV5 245 aa2.17□□□□□ -2.06
HDAC6-212ENST00000461608 KLHL28Q9NXS3 571 aa2.17□□□□□ -2.06
HDAC6-212ENST00000461608 NEUROG3Q9Y4Z2 214 aa2.17□□□□□ -2.06
HDAC6-212ENST00000461608 LRRK1Q38SD2 2015 aa2.17□□□□□ -2.06
HDAC6-212ENST00000461608 A0A0G2JRQ6 117 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 A0A0J9YXY3 114 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 A0A1W2PPV9 198 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 A6NIZ1 184 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 GFYI3L273 518 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 DLGAP1O14490 977 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 TIMP1P01033 207 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 MMP1P03956 469 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 HPGDP15428 266 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 TCN1P20061 433 aaPredicted RBP2.16□□□□□ -2.06
HDAC6-212ENST00000461608 ATP6V1B2P21281 511 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 ZBTB25P24278 435 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 CD1BP29016 333 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 GDI1P31150 447 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 CASP14P31944 242 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 TPMTP51580 245 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 UGT2B15P54855 530 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 PLP1P60201 277 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 RAP1BP61224 184 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 RPS8P62241 208 aaKnown RBP2.16□□□□□ -2.06
HDAC6-212ENST00000461608 KRTAP13-3Q3SY46 172 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 CCDC14Q49A88 953 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 BCL7AQ4VC05 210 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 LCE3AQ5TA76 89 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 RNASEKQ6P5S7 137 aaKnown RBP2.16□□□□□ -2.06
HDAC6-212ENST00000461608 TMIGD1Q6UXZ0 262 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 KDM7AQ6ZMT4 941 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 RNF165Q6ZSG1 346 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 H2AFVQ71UI9 128 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 PRSS41Q7RTY9 318 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 FAM220AQ7Z4H9 259 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 TMEM135Q86UB9 458 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 ZNF546Q86UE3 836 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 SLC26A11Q86WA9 606 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 ZNF584Q8IVC4 421 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 RNF175Q8N4F7 328 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 C11orf42Q8N5U0 333 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 LINC01555Q8NAE3 123 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 OR6C4Q8NGE1 309 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 RAB3IL1Q8TBN0 382 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 ZNF564Q8TBZ8 553 aaPredicted RBP2.16□□□□□ -2.06
HDAC6-212ENST00000461608 RNF139Q8WU17 664 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 ACOT11Q8WXI4 607 aaPredicted RBP2.16□□□□□ -2.06
HDAC6-212ENST00000461608 FRAT1Q92837 279 aaPredicted RBP2.16□□□□□ -2.06
HDAC6-212ENST00000461608 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.16□□□□□ -2.06
HDAC6-212ENST00000461608 MARC2Q969Z3 335 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 PHYHIPLQ96FC7 376 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 OXGR1Q96P68 337 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 ECSITQ9BQ95 431 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 NUP58Q9BVL2 599 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 RIOK2Q9BVS4 552 aaKnown RBP2.16□□□□□ -2.06
HDAC6-212ENST00000461608 ROGDIQ9GZN7 287 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 OR51J1Q9H342 316 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 VPS37BQ9H9H4 285 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 ZFP14Q9HCL3 533 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 NUFIP1Q9UHK0 495 aaKnown RBP2.16□□□□□ -2.06
HDAC6-212ENST00000461608 GNPTGQ9UJJ9 305 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 NUP50Q9UKX7 468 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 TRAF3IP3Q9Y228 551 aa2.16□□□□□ -2.06
HDAC6-212ENST00000461608 ABCA7Q8IZY2 2146 aa2.15□□□□□ -2.06
HDAC6-212ENST00000461608 ATP10AO60312 1499 aa2.15□□□□□ -2.06
HDAC6-212ENST00000461608 ARHGAP23Q9P227 1491 aa2.15□□□□□ -2.06
HDAC6-212ENST00000461608 A0A0B4J2A0 478 aa2.15□□□□□ -2.07
HDAC6-212ENST00000461608 C12orf71A8MTZ7 269 aa2.15□□□□□ -2.07
HDAC6-212ENST00000461608 C9JVG2 144 aa2.15□□□□□ -2.07
HDAC6-212ENST00000461608 E9PBE3 544 aa2.15□□□□□ -2.07
HDAC6-212ENST00000461608 SGK1O00141 431 aa2.15□□□□□ -2.07
HDAC6-212ENST00000461608 EMC8O43402 210 aa2.15□□□□□ -2.07
HDAC6-212ENST00000461608 MBTPS2O43462 519 aa2.15□□□□□ -2.07
HDAC6-212ENST00000461608 OR7A10O76100 309 aa2.15□□□□□ -2.07
HDAC6-212ENST00000461608 ERLIN2O94905 339 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms