RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 A0A1W2PPV4 95 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 ILVBLA1L0T0 632 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 FAM149AA5PLN7 773 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 C2CD4DB7Z1M9 353 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 F5H5T6 163 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 TLR4O00206 839 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 PGRMC1O00264 195 aaKnown RBP3.33□□□□□ -1.88
UBA3-204ENST00000461522 AIM2O14862 343 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 ARPC2O15144 300 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 ZNF208O43345 1280 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 DENRO43583 198 aaKnown RBP3.33□□□□□ -1.88
UBA3-204ENST00000461522 NDUFS6O75380 124 aaKnown RBP3.33□□□□□ -1.88
UBA3-204ENST00000461522 KRT33AO76009 404 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 CISD3P0C7P0 127 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 TNNI3P19429 210 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 CCNOP22674 350 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 MPZP25189 248 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 RPS9P46781 194 aaKnown RBP3.33□□□□□ -1.88
UBA3-204ENST00000461522 SERPINB8P50452 374 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 CCR4P51679 360 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 CDH4P55283 916 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 HNRNPKP61978 463 aaKnown RBP eCLIP3.33□□□□□ -1.88
UBA3-204ENST00000461522 OGDHQ02218 1023 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 PLOD1Q02809 727 aaPredicted RBP3.33□□□□□ -1.88
UBA3-204ENST00000461522 SLC25A11Q02978 314 aaKnown RBP3.33□□□□□ -1.88
UBA3-204ENST00000461522 RBPJQ06330 500 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 IFFO1Q0D2I5 559 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 SCRN3Q0VDG4 424 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 PPP1R8Q12972 351 aaKnown RBP3.33□□□□□ -1.88
UBA3-204ENST00000461522 NME3Q13232 169 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 TFDP2Q14188 446 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 EXT1Q16394 746 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 SNAPC1Q16533 368 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 PARP15Q460N3 678 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 HIGD2BQ4VC39 106 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 TEX44Q53QW1 395 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 TFDP3Q5H9I0 405 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 MS4A13Q5J8X5 152 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 MLIPQ5VWP3 458 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 SLC25A25Q6KCM7 469 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 CCDC137Q6PK04 289 aaKnown RBP3.33□□□□□ -1.88
UBA3-204ENST00000461522 GDPGP1Q6ZNW5 385 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 CCDC121Q6ZUS5 278 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 UTS2BQ765I0 119 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 FAM122BQ7Z309 247 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 CENPVQ7Z7K6 275 aaPredicted RBP3.33□□□□□ -1.88
UBA3-204ENST00000461522 LINC00523Q86TU6 105 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 NT5DC3Q86UY8 548 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 NUDCD3Q8IVD9 361 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 FAM58AQ8N1B3 248 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 CLEC4FQ8N1N0 589 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 ABHD12Q8N2K0 398 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 METTL4Q8N3J2 472 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 UBL4BQ8N7F7 174 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 CLEC1AQ8NC01 280 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 OR56B1Q8NGI3 324 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 JOSD2Q8TAC2 188 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 FAM172AQ8WUF8 416 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 NDRG1Q92597 394 aaKnown RBP3.33□□□□□ -1.88
UBA3-204ENST00000461522 FGF14Q92915 247 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 CLDN23Q96B33 292 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 ULK4Q96C45 1275 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 SLC25A36Q96CQ1 311 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 ZNF514Q96K75 400 aaPredicted RBP3.33□□□□□ -1.88
UBA3-204ENST00000461522 SFXN2Q96NB2 322 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 XPO6Q96QU8 1125 aaKnown RBP3.33□□□□□ -1.88
UBA3-204ENST00000461522 LPAR4Q99677 370 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 ALKBH7Q9BT30 221 aaPredicted RBP3.33□□□□□ -1.88
UBA3-204ENST00000461522 FICDQ9BVA6 458 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 NLNQ9BYT8 704 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 ZYG11BQ9C0D3 744 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 HOXD1Q9GZZ0 328 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 COG4Q9H9E3 785 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 SLC40A1Q9NP59 571 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 CHST11Q9NPF2 352 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 DUS2Q9NX74 493 aaKnown RBP3.33□□□□□ -1.88
UBA3-204ENST00000461522 GPR83Q9NYM4 423 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 GTSE1Q9NYZ3 720 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 CRNNQ9UBG3 495 aaPredicted RBP3.33□□□□□ -1.88
UBA3-204ENST00000461522 CTSZQ9UBR2 303 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 SNX7Q9UNH6 387 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 KCNK6Q9Y257 313 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 CCL26Q9Y258 94 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 TMED3Q9Y3Q3 217 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 OR51B4Q9Y5P0 310 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 PUS1Q9Y606 427 aaKnown RBP eCLIP3.33□□□□□ -1.88
UBA3-204ENST00000461522 XIRP2A4UGR9 3374 aa3.33□□□□□ -1.88
UBA3-204ENST00000461522 MTCL1Q9Y4B5 1905 aaKnown RBP3.32□□□□□ -1.88
UBA3-204ENST00000461522 A0A087WUV0 522 aaPredicted RBP3.32□□□□□ -1.88
UBA3-204ENST00000461522 NEMP2A6NFY4 417 aa3.32□□□□□ -1.88
UBA3-204ENST00000461522 C5orf52A6NGY3 159 aa3.32□□□□□ -1.88
UBA3-204ENST00000461522 PCP4L1A6NKN8 68 aa3.32□□□□□ -1.88
UBA3-204ENST00000461522 E9PAM4 449 aa3.32□□□□□ -1.88
UBA3-204ENST00000461522 H0YJX3 145 aa3.32□□□□□ -1.88
UBA3-204ENST00000461522 SCAMP2O15127 329 aaKnown RBP3.32□□□□□ -1.88
UBA3-204ENST00000461522 RNF13O43567 381 aa3.32□□□□□ -1.88
UBA3-204ENST00000461522 DFNA5O60443 496 aa3.32□□□□□ -1.88
UBA3-204ENST00000461522 NME6O75414 186 aaPredicted RBP3.32□□□□□ -1.88
UBA3-204ENST00000461522 VPS26AO75436 327 aa3.32□□□□□ -1.88
UBA3-204ENST00000461522 GRAP2O75791 330 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms