RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 EFCAB1Q9HAE3 211 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 UFSP2Q9NUQ7 469 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 DNAJC11Q9NVH1 559 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 CMTM6Q9NX76 183 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 NUDT4Q9NZJ9 180 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 MAT2BQ9NZL9 334 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 COPG2Q9UBF2 871 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 FETUBQ9UGM5 382 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 IL17BQ9UHF5 180 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 ZNF225Q9UK10 706 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 PILRAQ9UKJ1 303 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 PSME2Q9UL46 239 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 ZNF490Q9ULM2 529 aaPredicted RBP4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 BTRCQ9Y297 605 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 KCNK7Q9Y2U2 307 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 NDUFAF1Q9Y375 327 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 SESN1Q9Y6P5 492 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 ITPR2Q14571 2701 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 NBASA2RRP1 2371 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 A0A0A0MQY5 61 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 A0A0A6YYC8 382 aaPredicted RBP4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 LOC101059948A0A1B0GTJ6 334 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 WASHC1A8K0Z3 465 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 A8MV72 311 aaPredicted RBP4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 CDRT15L2A8MXV6 281 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 A8MZ25 164 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 LEUTXA8MZ59 168 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 FAM157AC9JC47 383 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 HSBP1L1C9JCN9 74 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 I3L1I5 382 aaPredicted RBP4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 CTDSP2O14595 271 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 TM9SF1O15321 606 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 ZNF749O43361 778 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 KCNAB3O43448 404 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 HS6ST1O60243 411 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 KLK8O60259 260 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 ALOX12BO75342 701 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 SCRG1O75711 98 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 OR2B3O76000 313 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 STK17BO94768 372 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 OR4F21O95013 312 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 SEMA3DO95025 777 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 CCNB2O95067 398 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 ETHE1O95571 254 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 CDK1P06493 297 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 CHRNGP07510 517 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 HOXD4P09016 255 aaPredicted RBP4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 HBQ1P09105 142 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 ANKRD34CP0C6C1 535 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 PRR35P0CG20 571 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 C1GALT1C1LP0DN25 315 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 IL1RNP18510 177 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 EDN2P20800 178 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 TACR3P29371 465 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 RBMS1P29558 406 aaKnown RBP4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 HTR2BP41595 481 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 NR4A2P43354 598 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 HTR6P50406 440 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 GBX2P52951 348 aaPredicted RBP4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 NAGLUP54802 743 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 DEFA1P59665 94 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 DEFA3P59666 94 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 ERVPABLB-1P60509 514 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 RAB8AP61006 207 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 REEP5Q00765 189 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 TRAF3Q13114 568 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 GTF2H2Q13888 395 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 ARHGAP19Q14CB8 494 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 TAB1Q15750 504 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 RBBP7Q16576 425 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 HIST2H2ACQ16777 129 aaPredicted RBP4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 MTX3Q5HYI7 312 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 SAPCD1Q5SSQ6 148 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 THEM4Q5T1C6 240 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 LGSNQ5TDP6 509 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 PYHIN1Q6K0P9 492 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 GTF2H2CQ6P1K8 395 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 ZNF782Q6ZMW2 699 aaPredicted RBP4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 SYVN1Q86TM6 617 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 CARM1Q86X55 608 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 CLIP4Q8N3C7 705 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 CSNK1A1LQ8N752 337 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 PACRGLQ8N7B6 248 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 ANKFN1Q8N957 763 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 POC5Q8NA72 575 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 OR6F1Q8NGZ6 308 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 ZFAND1Q8TCF1 268 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 AGR3Q8TD06 166 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 DOK4Q8TEW6 326 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 TMEM170AQ8WVE7 144 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 GTF3AQ92664 365 aaKnown RBP4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 SH3YL1Q96HL8 342 aaPredicted RBP4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 PGAM5Q96HS1 289 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 OR2A5Q96R48 311 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 F2RL3Q96RI0 385 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 MTERF1Q99551 399 aaKnown RBP4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 CMKLR1Q99788 373 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 TCEAL7Q9BRU2 100 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 TEX12Q9BXU0 123 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 KRTAP1-5Q9BYS1 174 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms