RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 C15orf38-AP3S2A0A0A6YYH1 394 aa2.32□□□□□ -2.04
RFC4-211ENST00000460408 GPR89AB7ZAQ6 455 aa2.32□□□□□ -2.04
RFC4-211ENST00000460408 PANO1I0J062 215 aa2.32□□□□□ -2.04
RFC4-211ENST00000460408 RTL8CO15255 209 aa2.32□□□□□ -2.04
RFC4-211ENST00000460408 N4BP1O75113 896 aaKnown RBP2.32□□□□□ -2.04
RFC4-211ENST00000460408 MTX2O75431 263 aa2.32□□□□□ -2.04
RFC4-211ENST00000460408 MMP23AO75900 390 aa2.32□□□□□ -2.04
RFC4-211ENST00000460408 GPR89BP0CG08 455 aa2.32□□□□□ -2.04
RFC4-211ENST00000460408 GRIA1P42261 906 aa2.32□□□□□ -2.04
RFC4-211ENST00000460408 HLCSP50747 726 aa2.32□□□□□ -2.04
RFC4-211ENST00000460408 ZNF763Q0D2J5 394 aa2.32□□□□□ -2.04
RFC4-211ENST00000460408 KLRB1Q12918 225 aa2.32□□□□□ -2.04
RFC4-211ENST00000460408 HERPUD1Q15011 391 aa2.32□□□□□ -2.04
RFC4-211ENST00000460408 PDK3Q15120 406 aa2.32□□□□□ -2.04
RFC4-211ENST00000460408 NSUN5P1Q3KNT7 163 aa2.32□□□□□ -2.04
RFC4-211ENST00000460408 SFT2D3Q587I9 215 aa2.32□□□□□ -2.04
RFC4-211ENST00000460408 OR2G6Q5TZ20 316 aa2.32□□□□□ -2.04
RFC4-211ENST00000460408 ATL3Q6DD88 541 aa2.32□□□□□ -2.04
RFC4-211ENST00000460408 Q6ZPB1 254 aaPredicted RBP2.32□□□□□ -2.04
RFC4-211ENST00000460408 VRK2Q86Y07 508 aa2.32□□□□□ -2.04
RFC4-211ENST00000460408 ZNF100Q8IYN0 542 aa2.32□□□□□ -2.04
RFC4-211ENST00000460408 ALLCQ8N6M5 410 aa2.32□□□□□ -2.04
RFC4-211ENST00000460408 OR2AP1Q8NGE2 309 aa2.32□□□□□ -2.04
RFC4-211ENST00000460408 SETD7Q8WTS6 366 aaKnown RBP2.32□□□□□ -2.04
RFC4-211ENST00000460408 IMMP1LQ96LU5 166 aa2.32□□□□□ -2.04
RFC4-211ENST00000460408 MTMR9Q96QG7 549 aa2.32□□□□□ -2.04
RFC4-211ENST00000460408 PSKH2Q96QS6 385 aa2.32□□□□□ -2.04
RFC4-211ENST00000460408 GAL3ST1Q99999 423 aa2.32□□□□□ -2.04
RFC4-211ENST00000460408 PARD6BQ9BYG5 372 aa2.32□□□□□ -2.04
RFC4-211ENST00000460408 NT5C3AQ9H0P0 336 aa2.32□□□□□ -2.04
RFC4-211ENST00000460408 PDFQ9HBH1 243 aa2.32□□□□□ -2.04
RFC4-211ENST00000460408 SH2D2AQ9NP31 389 aa2.32□□□□□ -2.04
RFC4-211ENST00000460408 ANAPC11Q9NYG5 84 aa2.32□□□□□ -2.04
RFC4-211ENST00000460408 KIF25Q9UIL4 384 aa2.32□□□□□ -2.04
RFC4-211ENST00000460408 PTBP2Q9UKA9 531 aaKnown RBP2.32□□□□□ -2.04
RFC4-211ENST00000460408 UGT2A1Q9Y4X1 527 aa2.32□□□□□ -2.04
RFC4-211ENST00000460408 ZNF646O15015 1829 aaPredicted RBP2.32□□□□□ -2.04
RFC4-211ENST00000460408 TTC21AQ8NDW8 1320 aa2.32□□□□□ -2.04
RFC4-211ENST00000460408 CLSPNQ9HAW4 1339 aa2.32□□□□□ -2.04
RFC4-211ENST00000460408 EEA1Q15075 1411 aa2.32□□□□□ -2.04
RFC4-211ENST00000460408 CASKIN1Q8WXD9 1431 aa2.32□□□□□ -2.04
RFC4-211ENST00000460408 BDP1A6H8Y1 2624 aa2.32□□□□□ -2.04
RFC4-211ENST00000460408 ITSN1Q15811 1721 aa2.31□□□□□ -2.04
RFC4-211ENST00000460408 BTAF1O14981 1849 aa2.31□□□□□ -2.04
RFC4-211ENST00000460408 ARFGEF1Q9Y6D6 1849 aa2.31□□□□□ -2.04
RFC4-211ENST00000460408 A0A0J9YXY3 114 aa2.31□□□□□ -2.04
RFC4-211ENST00000460408 PSMB11A5LHX3 300 aa2.31□□□□□ -2.04
RFC4-211ENST00000460408 TMEM110-MUSTN1A8MSY1 372 aa2.31□□□□□ -2.04
RFC4-211ENST00000460408 IDSB3KWA1 339 aa2.31□□□□□ -2.04
RFC4-211ENST00000460408 DCTN6O00399 190 aa2.31□□□□□ -2.04
RFC4-211ENST00000460408 EMC8O43402 210 aa2.31□□□□□ -2.04
RFC4-211ENST00000460408 PFKFB2O60825 505 aa2.31□□□□□ -2.04
RFC4-211ENST00000460408 RAMP3O60896 148 aa2.31□□□□□ -2.04
RFC4-211ENST00000460408 ZNF780AO75290 641 aaPredicted RBP2.31□□□□□ -2.04
RFC4-211ENST00000460408 LGI1O95970 557 aa2.31□□□□□ -2.04
RFC4-211ENST00000460408 RBMY1CP0DJD4 496 aa2.31□□□□□ -2.04
RFC4-211ENST00000460408 POU2F1P14859 743 aa2.31□□□□□ -2.04
RFC4-211ENST00000460408 FUT3P21217 361 aa2.31□□□□□ -2.04
RFC4-211ENST00000460408 GCAP28676 217 aa2.31□□□□□ -2.04
RFC4-211ENST00000460408 HTR1FP30939 366 aa2.31□□□□□ -2.04
RFC4-211ENST00000460408 PRPHP41219 470 aa2.31□□□□□ -2.04
RFC4-211ENST00000460408 QARSP47897 775 aaKnown RBP2.31□□□□□ -2.04
RFC4-211ENST00000460408 DUSP3P51452 185 aaPredicted RBP2.31□□□□□ -2.04
RFC4-211ENST00000460408 ACTR1AP61163 376 aa2.31□□□□□ -2.04
RFC4-211ENST00000460408 RIPK1Q13546 671 aa2.31□□□□□ -2.04
RFC4-211ENST00000460408 ARL6IP1Q15041 203 aa2.31□□□□□ -2.04
RFC4-211ENST00000460408 EXOC3L2Q2M3D2 409 aa2.31□□□□□ -2.04
RFC4-211ENST00000460408 C11orf71Q6IPW1 123 aa2.31□□□□□ -2.04
RFC4-211ENST00000460408 CASC1Q6TDU7 716 aa2.31□□□□□ -2.04
RFC4-211ENST00000460408 FAM43BQ6ZT52 329 aaPredicted RBP2.31□□□□□ -2.04
RFC4-211ENST00000460408 PRSS41Q7RTY9 318 aa2.31□□□□□ -2.04
RFC4-211ENST00000460408 TMEM110Q86TL2 294 aa2.31□□□□□ -2.04
RFC4-211ENST00000460408 ERI1Q8IV48 349 aaKnown RBP2.31□□□□□ -2.04
RFC4-211ENST00000460408 SLC35F2Q8IXU6 374 aa2.31□□□□□ -2.04
RFC4-211ENST00000460408 LRRC75A-AS1Q8N1F1 130 aa2.31□□□□□ -2.04
RFC4-211ENST00000460408 ZCCHC7Q8N3Z6 543 aaKnown RBP2.31□□□□□ -2.04
RFC4-211ENST00000460408 NKAPP1Q8N9T2 125 aa2.31□□□□□ -2.04
RFC4-211ENST00000460408 MFSD9Q8NBP5 474 aa2.31□□□□□ -2.04
RFC4-211ENST00000460408 OR2L5Q8NG80 312 aa2.31□□□□□ -2.04
RFC4-211ENST00000460408 OR5D13Q8NGL4 314 aa2.31□□□□□ -2.04
RFC4-211ENST00000460408 FBXO30Q8TB52 745 aa2.31□□□□□ -2.04
RFC4-211ENST00000460408 ANKRD49Q8WVL7 239 aa2.31□□□□□ -2.04
RFC4-211ENST00000460408 HTR3CQ8WXA8 447 aa2.31□□□□□ -2.04
RFC4-211ENST00000460408 ST8SIA1Q92185 356 aa2.31□□□□□ -2.04
RFC4-211ENST00000460408 EFHD2Q96C19 240 aaPredicted RBP2.31□□□□□ -2.04
RFC4-211ENST00000460408 ZIM3Q96PE6 472 aa2.31□□□□□ -2.04
RFC4-211ENST00000460408 EBF4Q9BQW3 602 aa2.31□□□□□ -2.04
RFC4-211ENST00000460408 ABCB10Q9NRK6 738 aa2.31□□□□□ -2.04
RFC4-211ENST00000460408 C6orf203Q9P0P8 240 aaPredicted RBP2.31□□□□□ -2.04
RFC4-211ENST00000460408 EXTL2Q9UBQ6 330 aa2.31□□□□□ -2.04
RFC4-211ENST00000460408 NAP1L2Q9ULW6 460 aaPredicted RBP2.31□□□□□ -2.04
RFC4-211ENST00000460408 PRPF19Q9UMS4 504 aaKnown RBP2.31□□□□□ -2.04
RFC4-211ENST00000460408 CELA1Q9UNI1 258 aa2.31□□□□□ -2.04
RFC4-211ENST00000460408 IFT52Q9Y366 437 aa2.31□□□□□ -2.04
RFC4-211ENST00000460408 EIF3AQ14152 1382 aaKnown RBP2.31□□□□□ -2.04
RFC4-211ENST00000460408 USP47Q96K76 1375 aa2.31□□□□□ -2.04
RFC4-211ENST00000460408 ANKRD11Q6UB99 2663 aaPredicted RBP2.31□□□□□ -2.04
RFC4-211ENST00000460408 TUBGCP6Q96RT7 1819 aa2.31□□□□□ -2.04
RFC4-211ENST00000460408 KIAA0100Q14667 2235 aaKnown RBP2.3□□□□□ -2.04
RFC4-211ENST00000460408 NCOR1O75376 2440 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms