RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 RADILQ96JH8 1075 aa20.21■□□□□ 0.83
PTPN4-208ENST00000460289 ZNF583Q96ND8 569 aa20.21■□□□□ 0.83
PTPN4-208ENST00000460289 ZNF587Q96SQ5 575 aaPredicted RBP20.21■□□□□ 0.83
PTPN4-208ENST00000460289 AP3M1Q9Y2T2 418 aa20.21■□□□□ 0.83
PTPN4-208ENST00000460289 LOC102725191A0A1B0GVB3 256 aa20.2■□□□□ 0.82
PTPN4-208ENST00000460289 CHP2O43745 196 aa20.2■□□□□ 0.82
PTPN4-208ENST00000460289 SELENOPP49908 381 aa20.2■□□□□ 0.82
PTPN4-208ENST00000460289 FOXD4Q12950 439 aaPredicted RBP20.2■□□□□ 0.82
PTPN4-208ENST00000460289 LINC00114Q6XXX2 140 aa20.2■□□□□ 0.82
PTPN4-208ENST00000460289 ADPRHL1Q8NDY3 354 aa20.2■□□□□ 0.82
PTPN4-208ENST00000460289 VANGL1Q8TAA9 524 aaPredicted RBP20.2■□□□□ 0.82
PTPN4-208ENST00000460289 PROX1Q92786 737 aa20.2■□□□□ 0.82
PTPN4-208ENST00000460289 ASPNQ9BXN1 380 aa20.2■□□□□ 0.82
PTPN4-208ENST00000460289 CXorf56Q9H5V9 222 aa20.2■□□□□ 0.82
PTPN4-208ENST00000460289 SEC14L4Q9UDX3 406 aa20.2■□□□□ 0.82
PTPN4-208ENST00000460289 BAG5Q9UL15 447 aa20.2■□□□□ 0.82
PTPN4-208ENST00000460289 MGAT4BQ9UQ53 548 aa20.2■□□□□ 0.82
PTPN4-208ENST00000460289 RCE1Q9Y256 329 aa20.2■□□□□ 0.82
PTPN4-208ENST00000460289 AMDHD2Q9Y303 409 aa20.2■□□□□ 0.82
PTPN4-208ENST00000460289 DSCAMO60469 2012 aa20.19■□□□□ 0.82
PTPN4-208ENST00000460289 CPSF4LA6NMK7 179 aaKnown RBP20.19■□□□□ 0.82
PTPN4-208ENST00000460289 ZNF587BE7ETH6 402 aa20.19■□□□□ 0.82
PTPN4-208ENST00000460289 NQO1P15559 274 aaKnown RBP20.19■□□□□ 0.82
PTPN4-208ENST00000460289 PTAFRP25105 342 aa20.19■□□□□ 0.82
PTPN4-208ENST00000460289 CLDN17P56750 224 aa20.19■□□□□ 0.82
PTPN4-208ENST00000460289 NPTX1Q15818 432 aa20.19■□□□□ 0.82
PTPN4-208ENST00000460289 ZNF672Q499Z4 452 aaPredicted RBP20.19■□□□□ 0.82
PTPN4-208ENST00000460289 C10orf53Q8N6V4 93 aa20.19■□□□□ 0.82
PTPN4-208ENST00000460289 SCAIQ8N9R8 606 aa20.19■□□□□ 0.82
PTPN4-208ENST00000460289 WFDC11Q8NEX6 87 aa20.19■□□□□ 0.82
PTPN4-208ENST00000460289 ADAMTS16Q8TE57 1224 aa20.19■□□□□ 0.82
PTPN4-208ENST00000460289 IGFBPL1Q8WX77 278 aa20.19■□□□□ 0.82
PTPN4-208ENST00000460289 RCN3Q96D15 328 aa20.19■□□□□ 0.82
PTPN4-208ENST00000460289 SLC41A3Q96GZ6 507 aa20.19■□□□□ 0.82
PTPN4-208ENST00000460289 BOD1Q96IK1 185 aa20.19■□□□□ 0.82
PTPN4-208ENST00000460289 LINC00470Q9BZP3 86 aa20.19■□□□□ 0.82
PTPN4-208ENST00000460289 PCDHAC1Q9H158 963 aa20.19■□□□□ 0.82
PTPN4-208ENST00000460289 SLC17A5Q9NRA2 495 aa20.19■□□□□ 0.82
PTPN4-208ENST00000460289 NPAP1Q9NZP6 1156 aa20.19■□□□□ 0.82
PTPN4-208ENST00000460289 B3GAT1Q9P2W7 334 aa20.19■□□□□ 0.82
PTPN4-208ENST00000460289 MAGED1Q9Y5V3 778 aaPredicted RBP20.19■□□□□ 0.82
PTPN4-208ENST00000460289 RAI1Q7Z5J4 1906 aaPredicted RBP20.19■□□□□ 0.82
PTPN4-208ENST00000460289 A0A1W2PR80 420 aa20.18■□□□□ 0.82
PTPN4-208ENST00000460289 TRAPPC13A5PLN9 417 aa20.18■□□□□ 0.82
PTPN4-208ENST00000460289 ABCD4O14678 606 aa20.18■□□□□ 0.82
PTPN4-208ENST00000460289 AKAP8O43823 692 aaKnown RBP20.18■□□□□ 0.82
PTPN4-208ENST00000460289 MT-ATP6P00846 226 aa20.18■□□□□ 0.82
PTPN4-208ENST00000460289 BGLAPP02818 100 aa20.18■□□□□ 0.82
PTPN4-208ENST00000460289 FOSL1P15407 271 aa20.18■□□□□ 0.82
PTPN4-208ENST00000460289 CBLP22681 906 aa20.18■□□□□ 0.82
PTPN4-208ENST00000460289 PRPS1P60891 318 aa20.18■□□□□ 0.82
PTPN4-208ENST00000460289 IL1RL1Q01638 556 aa20.18■□□□□ 0.82
PTPN4-208ENST00000460289 TTC33Q6PID6 262 aaPredicted RBP20.18■□□□□ 0.82
PTPN4-208ENST00000460289 PRSS57Q6UWY2 283 aa20.18■□□□□ 0.82
PTPN4-208ENST00000460289 ARPINQ7Z6K5 226 aa20.18■□□□□ 0.82
PTPN4-208ENST00000460289 RBM45Q8IUH3 476 aaKnown RBP20.18■□□□□ 0.82
PTPN4-208ENST00000460289 POU5F2Q8N7G0 328 aa20.18■□□□□ 0.82
PTPN4-208ENST00000460289 WDR31Q8NA23 367 aa20.18■□□□□ 0.82
PTPN4-208ENST00000460289 OR4D11Q8NGI4 311 aa20.18■□□□□ 0.82
PTPN4-208ENST00000460289 MPP4Q96JB8 637 aa20.18■□□□□ 0.82
PTPN4-208ENST00000460289 GSX2Q9BZM3 304 aa20.18■□□□□ 0.82
PTPN4-208ENST00000460289 LAMP3Q9UQV4 416 aa20.18■□□□□ 0.82
PTPN4-208ENST00000460289 SH3GLB1Q9Y371 365 aa20.18■□□□□ 0.82
PTPN4-208ENST00000460289 FAM220BPB1ANY3 271 aa20.17■□□□□ 0.82
PTPN4-208ENST00000460289 MS4A18H0YCH9 400 aa20.17■□□□□ 0.82
PTPN4-208ENST00000460289 SLC43A1O75387 559 aa20.17■□□□□ 0.82
PTPN4-208ENST00000460289 WNT11O96014 354 aa20.17■□□□□ 0.82
PTPN4-208ENST00000460289 COX4I1P13073 169 aa20.17■□□□□ 0.82
PTPN4-208ENST00000460289 PAX1P15863 534 aa20.17■□□□□ 0.82
PTPN4-208ENST00000460289 CDH2P19022 906 aaPredicted RBP20.17■□□□□ 0.82
PTPN4-208ENST00000460289 ZNF83P51522 516 aa20.17■□□□□ 0.82
PTPN4-208ENST00000460289 CRYBA2P53672 197 aa20.17■□□□□ 0.82
PTPN4-208ENST00000460289 LTBQ06643 244 aa20.17■□□□□ 0.82
PTPN4-208ENST00000460289 PMS2P3Q13401 168 aa20.17■□□□□ 0.82
PTPN4-208ENST00000460289 MS4A18Q3C1V0 323 aa20.17■□□□□ 0.82
PTPN4-208ENST00000460289 Q5PR19 223 aa20.17■□□□□ 0.82
PTPN4-208ENST00000460289 KLHL24Q6TFL4 600 aa20.17■□□□□ 0.82
PTPN4-208ENST00000460289 SPATA21Q7Z572 469 aa20.17■□□□□ 0.82
PTPN4-208ENST00000460289 UEVLDQ8IX04 471 aa20.17■□□□□ 0.82
PTPN4-208ENST00000460289 DEPDC4Q8N2C3 294 aa20.17■□□□□ 0.82
PTPN4-208ENST00000460289 ANKK1Q8NFD2 765 aa20.17■□□□□ 0.82
PTPN4-208ENST00000460289 KBTBD8Q8NFY9 601 aa20.17■□□□□ 0.82
PTPN4-208ENST00000460289 OR2T12Q8NG77 320 aa20.17■□□□□ 0.82
PTPN4-208ENST00000460289 SMAP2Q8WU79 429 aaPredicted RBP20.17■□□□□ 0.82
PTPN4-208ENST00000460289 PERPQ96FX8 193 aa20.17■□□□□ 0.82
PTPN4-208ENST00000460289 OBP2BQ9NPH6 170 aa20.17■□□□□ 0.82
PTPN4-208ENST00000460289 MRPL39Q9NYK5 338 aaKnown RBP20.17■□□□□ 0.82
PTPN4-208ENST00000460289 CISD1Q9NZ45 108 aaKnown RBP20.17■□□□□ 0.82
PTPN4-208ENST00000460289 ZNF432O94892 652 aa20.16■□□□□ 0.82
PTPN4-208ENST00000460289 PAX7P23759 505 aa20.16■□□□□ 0.82
PTPN4-208ENST00000460289 CD40P25942 277 aa20.16■□□□□ 0.82
PTPN4-208ENST00000460289 RPS4XP62701 263 aaKnown RBP20.16■□□□□ 0.82
PTPN4-208ENST00000460289 HMBOX1Q6NT76 420 aa20.16■□□□□ 0.82
PTPN4-208ENST00000460289 KRTAP1-3Q8IUG1 177 aa20.16■□□□□ 0.82
PTPN4-208ENST00000460289 PIAS4Q8N2W9 510 aaPredicted RBP20.16■□□□□ 0.82
PTPN4-208ENST00000460289 MOGAT1Q96PD6 335 aa20.16■□□□□ 0.82
PTPN4-208ENST00000460289 HOPXQ9BPY8 73 aaPredicted RBP20.16■□□□□ 0.82
PTPN4-208ENST00000460289 ELAC2Q9BQ52 826 aaKnown RBP20.16■□□□□ 0.82
PTPN4-208ENST00000460289 SLC19A3Q9BZV2 496 aa20.16■□□□□ 0.82
PTPN4-208ENST00000460289 EFCAB1Q9HAE3 211 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms