RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 MALT1Q9UDY8 824 aa9.5□□□□□ -0.89
UBR4-208ENST00000459947 AMDHD2Q9Y303 409 aa9.5□□□□□ -0.89
UBR4-208ENST00000459947 TESMINQ9Y4I5 508 aa9.5□□□□□ -0.89
UBR4-208ENST00000459947 RP1L1Q8IWN7 2480 aaPredicted RBP9.5□□□□□ -0.89
UBR4-208ENST00000459947 A0A1W2PRG6 482 aa9.5□□□□□ -0.89
UBR4-208ENST00000459947 ZNF726A6NNF4 738 aa9.5□□□□□ -0.89
UBR4-208ENST00000459947 KDM4EB2RXH2 506 aaPredicted RBP9.5□□□□□ -0.89
UBR4-208ENST00000459947 KRT33AO76009 404 aa9.5□□□□□ -0.89
UBR4-208ENST00000459947 EPXP11678 715 aa9.5□□□□□ -0.89
UBR4-208ENST00000459947 TCN1P20061 433 aaPredicted RBP9.5□□□□□ -0.89
UBR4-208ENST00000459947 HOXC12P31275 282 aa9.5□□□□□ -0.89
UBR4-208ENST00000459947 CREB3L2Q70SY1 520 aa9.5□□□□□ -0.89
UBR4-208ENST00000459947 VTCN1Q7Z7D3 282 aa9.5□□□□□ -0.89
UBR4-208ENST00000459947 LUZP2Q86TE4 346 aa9.5□□□□□ -0.89
UBR4-208ENST00000459947 MCCC2Q9HCC0 563 aa9.5□□□□□ -0.89
UBR4-208ENST00000459947 IL1RAPQ9NPH3 570 aa9.5□□□□□ -0.89
UBR4-208ENST00000459947 CLEC4AQ9UMR7 237 aa9.5□□□□□ -0.89
UBR4-208ENST00000459947 AURKCQ9UQB9 309 aa9.5□□□□□ -0.89
UBR4-208ENST00000459947 ENO4A6NNW6 628 aa9.49□□□□□ -0.89
UBR4-208ENST00000459947 SEMG1P04279 462 aa9.49□□□□□ -0.89
UBR4-208ENST00000459947 OR1E2P47887 323 aa9.49□□□□□ -0.89
UBR4-208ENST00000459947 NR1H2P55055 460 aa9.49□□□□□ -0.89
UBR4-208ENST00000459947 PRPS1P60891 318 aa9.49□□□□□ -0.89
UBR4-208ENST00000459947 ITGADQ13349 1161 aa9.49□□□□□ -0.89
UBR4-208ENST00000459947 DPPA2Q7Z7J5 298 aa9.49□□□□□ -0.89
UBR4-208ENST00000459947 RBM45Q8IUH3 476 aaKnown RBP9.49□□□□□ -0.89
UBR4-208ENST00000459947 HSD17B8Q92506 261 aa9.49□□□□□ -0.89
UBR4-208ENST00000459947 MARVELD3Q96A59 401 aa9.49□□□□□ -0.89
UBR4-208ENST00000459947 BOD1Q96IK1 185 aa9.49□□□□□ -0.89
UBR4-208ENST00000459947 TAS2R16Q9NYV7 291 aa9.49□□□□□ -0.89
UBR4-208ENST00000459947 FBXL3Q9UKT7 428 aa9.49□□□□□ -0.89
UBR4-208ENST00000459947 DIDO1Q9BTC0 2240 aaKnown RBP9.49□□□□□ -0.89
UBR4-208ENST00000459947 IGHV3-15A0A0B4J1V0 119 aa9.49□□□□□ -0.89
UBR4-208ENST00000459947 ZNF587BE7ETH6 402 aa9.49□□□□□ -0.89
UBR4-208ENST00000459947 COX5AP20674 150 aa9.49□□□□□ -0.89
UBR4-208ENST00000459947 PIN1Q13526 163 aaPredicted RBP9.49□□□□□ -0.89
UBR4-208ENST00000459947 RPL13AP3Q6NVV1 102 aa9.49□□□□□ -0.89
UBR4-208ENST00000459947 GPR137CQ8N3F9 429 aa9.49□□□□□ -0.89
UBR4-208ENST00000459947 RNF148Q8N7C7 305 aa9.49□□□□□ -0.89
UBR4-208ENST00000459947 LRMDAQ9H2I8 198 aa9.49□□□□□ -0.89
UBR4-208ENST00000459947 ASB6Q9NWX5 421 aa9.49□□□□□ -0.89
UBR4-208ENST00000459947 NBASA2RRP1 2371 aa9.49□□□□□ -0.89
UBR4-208ENST00000459947 MED12LQ86YW9 2145 aa9.49□□□□□ -0.89
UBR4-208ENST00000459947 A6NIZ1 184 aa9.49□□□□□ -0.89
UBR4-208ENST00000459947 PLPP3O14495 311 aa9.49□□□□□ -0.89
UBR4-208ENST00000459947 CH25HO95992 272 aa9.49□□□□□ -0.89
UBR4-208ENST00000459947 RAP2AP10114 183 aa9.49□□□□□ -0.89
UBR4-208ENST00000459947 MPGP29372 298 aa9.49□□□□□ -0.89
UBR4-208ENST00000459947 UGT2B10P36537 528 aa9.49□□□□□ -0.89
UBR4-208ENST00000459947 P2RY4P51582 365 aa9.49□□□□□ -0.89
UBR4-208ENST00000459947 RAP1BP61224 184 aa9.49□□□□□ -0.89
UBR4-208ENST00000459947 RAP1AP62834 184 aa9.49□□□□□ -0.89
UBR4-208ENST00000459947 SFRP5Q5T4F7 317 aa9.49□□□□□ -0.89
UBR4-208ENST00000459947 PGM2L1Q6PCE3 622 aa9.49□□□□□ -0.89
UBR4-208ENST00000459947 KLHL24Q6TFL4 600 aa9.49□□□□□ -0.89
UBR4-208ENST00000459947 BHLHA15Q7RTS1 189 aaPredicted RBP9.49□□□□□ -0.89
UBR4-208ENST00000459947 NUFIP2Q7Z417 695 aaKnown RBP9.49□□□□□ -0.89
UBR4-208ENST00000459947 GPAT4Q86UL3 456 aa9.49□□□□□ -0.89
UBR4-208ENST00000459947 ZDHHC21Q8IVQ6 265 aa9.49□□□□□ -0.89
UBR4-208ENST00000459947 MAGEE2Q8TD90 523 aaPredicted RBP9.49□□□□□ -0.89
UBR4-208ENST00000459947 C7orf34Q96L11 122 aa9.49□□□□□ -0.89
UBR4-208ENST00000459947 RSPO3Q9BXY4 272 aaPredicted RBP9.49□□□□□ -0.89
UBR4-208ENST00000459947 C12orf49Q9H741 205 aa9.49□□□□□ -0.89
UBR4-208ENST00000459947 ING1Q9UK53 422 aaPredicted RBP9.49□□□□□ -0.89
UBR4-208ENST00000459947 CFAP46Q8IYW2 2715 aa9.48□□□□□ -0.89
UBR4-208ENST00000459947 HCFC1P51610 2035 aa9.48□□□□□ -0.89
UBR4-208ENST00000459947 SH3D21A4FU49 640 aa9.48□□□□□ -0.89
UBR4-208ENST00000459947 EFCAB9A8MZ26 197 aa9.48□□□□□ -0.89
UBR4-208ENST00000459947 AHCYL1O43865 530 aa9.48□□□□□ -0.89
UBR4-208ENST00000459947 WNT11O96014 354 aa9.48□□□□□ -0.89
UBR4-208ENST00000459947 IFI30P13284 250 aa9.48□□□□□ -0.89
UBR4-208ENST00000459947 FUT1P19526 365 aa9.48□□□□□ -0.89
UBR4-208ENST00000459947 FLOT2Q14254 428 aa9.48□□□□□ -0.89
UBR4-208ENST00000459947 ZNF474Q6S9Z5 364 aaPredicted RBP9.48□□□□□ -0.89
UBR4-208ENST00000459947 GABRG1Q8N1C3 465 aa9.48□□□□□ -0.89
UBR4-208ENST00000459947 UBE2J2Q8N2K1 259 aa9.48□□□□□ -0.89
UBR4-208ENST00000459947 TMCC2O75069 709 aa9.48□□□□□ -0.89
UBR4-208ENST00000459947 GADD45GO95257 159 aa9.48□□□□□ -0.89
UBR4-208ENST00000459947 ASAH2BP0C7U1 165 aa9.48□□□□□ -0.89
UBR4-208ENST00000459947 ADORA3P0DMS8 318 aa9.48□□□□□ -0.89
UBR4-208ENST00000459947 RRM2P31350 389 aa9.48□□□□□ -0.89
UBR4-208ENST00000459947 MAGEA2P43356 314 aa9.48□□□□□ -0.89
UBR4-208ENST00000459947 SPIBQ01892 262 aa9.48□□□□□ -0.89
UBR4-208ENST00000459947 BEX5Q5H9J7 111 aa9.48□□□□□ -0.89
UBR4-208ENST00000459947 TMPRSS11FQ6ZWK6 438 aa9.48□□□□□ -0.89
UBR4-208ENST00000459947 MUCL1Q96DR8 90 aa9.48□□□□□ -0.89
UBR4-208ENST00000459947 NMNAT1Q9HAN9 279 aaPredicted RBP9.48□□□□□ -0.89
UBR4-208ENST00000459947 INIPQ9NRY2 104 aa9.48□□□□□ -0.89
UBR4-208ENST00000459947 NDUFAF4Q9P032 175 aa9.48□□□□□ -0.89
UBR4-208ENST00000459947 RPL36A-HNRNPH2H7BZ11 118 aa9.48□□□□□ -0.89
UBR4-208ENST00000459947 CRYGSP22914 178 aa9.48□□□□□ -0.89
UBR4-208ENST00000459947 UGT2B15P54855 530 aa9.48□□□□□ -0.89
UBR4-208ENST00000459947 FGD3Q5JSP0 725 aa9.48□□□□□ -0.89
UBR4-208ENST00000459947 HMBOX1Q6NT76 420 aa9.48□□□□□ -0.89
UBR4-208ENST00000459947 KLHL17Q6TDP4 642 aa9.48□□□□□ -0.89
UBR4-208ENST00000459947 OR6X1Q8NH79 312 aa9.48□□□□□ -0.89
UBR4-208ENST00000459947 BPIFA2Q96DR5 249 aa9.48□□□□□ -0.89
UBR4-208ENST00000459947 MED18Q9BUE0 208 aa9.48□□□□□ -0.89
UBR4-208ENST00000459947 CIB4A0PJX0 185 aa9.47□□□□□ -0.89
UBR4-208ENST00000459947 CLDN17P56750 224 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms