RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 IGFBP1P08833 259 aaPredicted RBP8.09□□□□□ -1.11
VPS50-207ENST00000458530 PRR23D2P0DMB1 279 aaPredicted RBP8.09□□□□□ -1.11
VPS50-207ENST00000458530 PEPDP12955 493 aa8.09□□□□□ -1.11
VPS50-207ENST00000458530 MYL12AP19105 171 aa8.09□□□□□ -1.11
VPS50-207ENST00000458530 F8A1P23610 371 aa8.09□□□□□ -1.11
VPS50-207ENST00000458530 MST1P26927 711 aa8.09□□□□□ -1.11
VPS50-207ENST00000458530 PTGDSP41222 190 aa8.09□□□□□ -1.11
VPS50-207ENST00000458530 CD97P48960 835 aa8.09□□□□□ -1.11
VPS50-207ENST00000458530 CLK1P49759 484 aaKnown RBP8.09□□□□□ -1.11
VPS50-207ENST00000458530 CDH11P55287 796 aa8.09□□□□□ -1.11
VPS50-207ENST00000458530 RPS4XP62701 263 aaKnown RBP8.09□□□□□ -1.11
VPS50-207ENST00000458530 ZNF91Q05481 1191 aa8.09□□□□□ -1.11
VPS50-207ENST00000458530 LGALS3BPQ08380 585 aa8.09□□□□□ -1.11
VPS50-207ENST00000458530 RAB40BQ12829 278 aa8.09□□□□□ -1.11
VPS50-207ENST00000458530 SELENBP1Q13228 472 aa8.09□□□□□ -1.11
VPS50-207ENST00000458530 C1DQ13901 141 aaKnown RBP8.09□□□□□ -1.11
VPS50-207ENST00000458530 NEDD8Q15843 81 aa8.09□□□□□ -1.11
VPS50-207ENST00000458530 SMN1Q16637 294 aaKnown RBP8.09□□□□□ -1.11
VPS50-207ENST00000458530 PLPPR5Q32ZL2 321 aa8.09□□□□□ -1.11
VPS50-207ENST00000458530 SYT14P1Q58G82 188 aa8.09□□□□□ -1.11
VPS50-207ENST00000458530 EMC4Q5J8M3 183 aa8.09□□□□□ -1.11
VPS50-207ENST00000458530 LCN1P1Q5VSP4 162 aa8.09□□□□□ -1.11
VPS50-207ENST00000458530 C1orf140Q5VVS0 124 aa8.09□□□□□ -1.11
VPS50-207ENST00000458530 GPR139Q6DWJ6 353 aa8.09□□□□□ -1.11
VPS50-207ENST00000458530 POMZP3Q6PJE2 187 aa8.09□□□□□ -1.11
VPS50-207ENST00000458530 CXXC5Q7LFL8 322 aaKnown RBP8.09□□□□□ -1.11
VPS50-207ENST00000458530 SLC46A3Q7Z3Q1 461 aa8.09□□□□□ -1.11
VPS50-207ENST00000458530 SATL1Q86VE3 508 aa8.09□□□□□ -1.11
VPS50-207ENST00000458530 SIRT6Q8N6T7 355 aa8.09□□□□□ -1.11
VPS50-207ENST00000458530 FADS6Q8N9I5 356 aa8.09□□□□□ -1.11
VPS50-207ENST00000458530 OR1J4Q8NGS1 313 aa8.09□□□□□ -1.11
VPS50-207ENST00000458530 OR4Q3Q8NH05 313 aa8.09□□□□□ -1.11
VPS50-207ENST00000458530 C1GALT1C1Q96EU7 318 aa8.09□□□□□ -1.11
VPS50-207ENST00000458530 ZNF582Q96NG8 517 aaPredicted RBP8.09□□□□□ -1.11
VPS50-207ENST00000458530 MYCBPQ99417 103 aaPredicted RBP8.09□□□□□ -1.11
VPS50-207ENST00000458530 UTP23Q9BRU9 249 aaKnown RBP8.09□□□□□ -1.11
VPS50-207ENST00000458530 TAPBPLQ9BX59 468 aa8.09□□□□□ -1.11
VPS50-207ENST00000458530 POTEKPQ9BYX7 375 aa8.09□□□□□ -1.11
VPS50-207ENST00000458530 MCCC2Q9HCC0 563 aa8.09□□□□□ -1.11
VPS50-207ENST00000458530 SH2D2AQ9NP31 389 aa8.09□□□□□ -1.11
VPS50-207ENST00000458530 FKBP14Q9NWM8 211 aa8.09□□□□□ -1.11
VPS50-207ENST00000458530 MED11Q9P086 117 aa8.09□□□□□ -1.11
VPS50-207ENST00000458530 DKKL1Q9UK85 242 aa8.09□□□□□ -1.11
VPS50-207ENST00000458530 FBN2P35556 2912 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 TMEM72A0PK05 275 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 GJE1A6NN92 205 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 ZNF891A8MT65 544 aaPredicted RBP8.08□□□□□ -1.12
VPS50-207ENST00000458530 ZNF99A8MXY4 864 aaPredicted RBP8.08□□□□□ -1.12
VPS50-207ENST00000458530 ZNF701M0R085 212 aaPredicted RBP8.08□□□□□ -1.12
VPS50-207ENST00000458530 M0R129 80 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 ADAM10O14672 748 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 ARPC3O15145 178 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 PPP1R3DO95685 299 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 FADS2O95864 444 aaKnown RBP8.08□□□□□ -1.12
VPS50-207ENST00000458530 MT-ND2P03891 347 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 CD14P08571 375 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 ASAH2BP0C7U1 165 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 DBTP11182 482 aaKnown RBP8.08□□□□□ -1.12
VPS50-207ENST00000458530 LIFP15018 202 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 ZNF17P17021 662 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 CCNA2P20248 432 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 DCKP27707 260 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 IDUAP35475 653 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 RPS5P46782 204 aaKnown RBP8.08□□□□□ -1.12
VPS50-207ENST00000458530 MTNR1AP48039 350 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 ST13P50502 369 aaKnown RBP8.08□□□□□ -1.12
VPS50-207ENST00000458530 NUDT6P53370 316 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 DSCR4P56555 118 aaPredicted RBP8.08□□□□□ -1.12
VPS50-207ENST00000458530 EFNB1P98172 346 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 OC90Q02509 493 aaPredicted RBP8.08□□□□□ -1.12
VPS50-207ENST00000458530 Q0VFX4 171 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 ST3GAL4Q11206 333 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 POU4F2Q12837 409 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 FOXF1Q12946 379 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 TOMM34Q15785 309 aaPredicted RBP8.08□□□□□ -1.12
VPS50-207ENST00000458530 IGFBP7Q16270 282 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 SGCBQ16585 318 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 GLYR1Q49A26 553 aaPredicted RBP8.08□□□□□ -1.12
VPS50-207ENST00000458530 CRTC2Q53ET0 693 aaPredicted RBP8.08□□□□□ -1.12
VPS50-207ENST00000458530 ALG10Q5BKT4 473 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 PRAMEF20Q5VT98 475 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 RNLSQ5VYX0 342 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 BICRALQ6AI39 1079 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 FCRLBQ6BAA4 426 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 ZNF367Q7RTV3 350 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 HDDC2Q7Z4H3 204 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 JAZF1Q86VZ6 243 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 ADGRG3Q86Y34 549 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 BEST3Q8N1M1 668 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 SCAIQ8N9R8 606 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 PSD4Q8NDX1 1056 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 OR5J2Q8NH18 312 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 MFSD8Q8NHS3 518 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 ZNF420Q8TAQ5 688 aaPredicted RBP8.08□□□□□ -1.12
VPS50-207ENST00000458530 GGHQ92820 318 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 UBE2FQ969M7 185 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 MUL1Q969V5 352 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 DGCR14Q96DF8 476 aaKnown RBP8.08□□□□□ -1.12
VPS50-207ENST00000458530 TMEM80Q96HE8 168 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 ERMAPQ96PL5 475 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms