RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 ANKRD27Q96NW4 1050 aa18.71■□□□□ 0.59
CPNE1-220ENST00000458038 ALKBH3Q96Q83 286 aaPredicted RBP18.71■□□□□ 0.59
CPNE1-220ENST00000458038 ZNF442Q9H7R0 627 aa18.71■□□□□ 0.59
CPNE1-220ENST00000458038 CHODLQ9H9P2 273 aa18.71■□□□□ 0.59
CPNE1-220ENST00000458038 TPT1P8Q9HAU6 139 aa18.71■□□□□ 0.59
CPNE1-220ENST00000458038 IGHV4-61A0A0C4DH41 118 aa18.7■□□□□ 0.58
CPNE1-220ENST00000458038 SLC35F4A4IF30 521 aa18.7■□□□□ 0.58
CPNE1-220ENST00000458038 SLC22A3O75751 556 aa18.7■□□□□ 0.58
CPNE1-220ENST00000458038 TGFAP01135 160 aa18.7■□□□□ 0.58
CPNE1-220ENST00000458038 IGKV3-15P01624 115 aa18.7■□□□□ 0.58
CPNE1-220ENST00000458038 BCHEP06276 602 aa18.7■□□□□ 0.58
CPNE1-220ENST00000458038 ETFAP13804 333 aa18.7■□□□□ 0.58
CPNE1-220ENST00000458038 GIFP27352 417 aa18.7■□□□□ 0.58
CPNE1-220ENST00000458038 GTF2E2P29084 291 aaKnown RBP18.7■□□□□ 0.58
CPNE1-220ENST00000458038 EPHA3P29320 983 aa18.7■□□□□ 0.58
CPNE1-220ENST00000458038 ROR2Q01974 943 aaKnown RBP18.7■□□□□ 0.58
CPNE1-220ENST00000458038 PDCD4Q53EL6 469 aaKnown RBP18.7■□□□□ 0.58
CPNE1-220ENST00000458038 TNFAIP8L3Q5GJ75 292 aa18.7■□□□□ 0.58
CPNE1-220ENST00000458038 HHATQ5VTY9 493 aa18.7■□□□□ 0.58
CPNE1-220ENST00000458038 LIPNQ5VXI9 398 aa18.7■□□□□ 0.58
CPNE1-220ENST00000458038 UGT2A3Q6UWM9 527 aa18.7■□□□□ 0.58
CPNE1-220ENST00000458038 C5orf46Q6UWT4 87 aa18.7■□□□□ 0.58
CPNE1-220ENST00000458038 CLIP4Q8N3C7 705 aa18.7■□□□□ 0.58
CPNE1-220ENST00000458038 ANKS4BQ8N8V4 417 aa18.7■□□□□ 0.58
CPNE1-220ENST00000458038 ITCHQ96J02 903 aa18.7■□□□□ 0.58
CPNE1-220ENST00000458038 THAP1Q9NVV9 213 aa18.7■□□□□ 0.58
CPNE1-220ENST00000458038 FTCDNL1E5RQL4 147 aa18.69■□□□□ 0.58
CPNE1-220ENST00000458038 OR2T1O43869 369 aa18.69■□□□□ 0.58
CPNE1-220ENST00000458038 SLC43A1O75387 559 aa18.69■□□□□ 0.58
CPNE1-220ENST00000458038 UPK3AO75631 287 aa18.69■□□□□ 0.58
CPNE1-220ENST00000458038 CBR1P16152 277 aa18.69■□□□□ 0.58
CPNE1-220ENST00000458038 LGALS3BPQ08380 585 aa18.69■□□□□ 0.58
CPNE1-220ENST00000458038 MPP2Q14168 576 aa18.69■□□□□ 0.58
CPNE1-220ENST00000458038 HPS1Q92902 700 aa18.69■□□□□ 0.58
CPNE1-220ENST00000458038 OXGR1Q96P68 337 aa18.69■□□□□ 0.58
CPNE1-220ENST00000458038 PAIP2Q9BPZ3 127 aaKnown RBP18.69■□□□□ 0.58
CPNE1-220ENST00000458038 C19orf24Q9BVV8 132 aa18.69■□□□□ 0.58
CPNE1-220ENST00000458038 C12orf10Q9HB07 376 aa18.69■□□□□ 0.58
CPNE1-220ENST00000458038 PCDHB14Q9Y5E9 798 aa18.69■□□□□ 0.58
CPNE1-220ENST00000458038 A0A096LPE4 126 aa18.68■□□□□ 0.58
CPNE1-220ENST00000458038 A0A1W2PPZ6 126 aa18.68■□□□□ 0.58
CPNE1-220ENST00000458038 NR5A2O00482 541 aa18.68■□□□□ 0.58
CPNE1-220ENST00000458038 FZD7O75084 574 aa18.68■□□□□ 0.58
CPNE1-220ENST00000458038 ZNF432O94892 652 aa18.68■□□□□ 0.58
CPNE1-220ENST00000458038 PNMTP11086 282 aa18.68■□□□□ 0.58
CPNE1-220ENST00000458038 PRG2P13727 222 aa18.68■□□□□ 0.58
CPNE1-220ENST00000458038 NPR2P20594 1047 aa18.68■□□□□ 0.58
CPNE1-220ENST00000458038 ARR3P36575 388 aa18.68■□□□□ 0.58
CPNE1-220ENST00000458038 VHLLQ6RSH7 139 aa18.68■□□□□ 0.58
CPNE1-220ENST00000458038 LINGO2Q7L985 606 aa18.68■□□□□ 0.58
CPNE1-220ENST00000458038 NET1Q7Z628 596 aaPredicted RBP18.68■□□□□ 0.58
CPNE1-220ENST00000458038 SERPINA11Q86U17 422 aa18.68■□□□□ 0.58
CPNE1-220ENST00000458038 GPR137CQ8N3F9 429 aa18.68■□□□□ 0.58
CPNE1-220ENST00000458038 BPESC1Q9GZL8 116 aa18.68■□□□□ 0.58
CPNE1-220ENST00000458038 CENPHQ9H3R5 247 aa18.68■□□□□ 0.58
CPNE1-220ENST00000458038 RAD21L1Q9H4I0 556 aa18.68■□□□□ 0.58
CPNE1-220ENST00000458038 WDR55Q9H6Y2 383 aaPredicted RBP18.68■□□□□ 0.58
CPNE1-220ENST00000458038 BCL2L10Q9HD36 194 aa18.68■□□□□ 0.58
CPNE1-220ENST00000458038 SLC6A13Q9NSD5 602 aa18.68■□□□□ 0.58
CPNE1-220ENST00000458038 ZIM2Q9NZV7 527 aa18.68■□□□□ 0.58
CPNE1-220ENST00000458038 LOC102725191A0A1B0GVB3 256 aa18.67■□□□□ 0.58
CPNE1-220ENST00000458038 AKAP8O43823 692 aaKnown RBP18.67■□□□□ 0.58
CPNE1-220ENST00000458038 STAMBPO95630 424 aa18.67■□□□□ 0.58
CPNE1-220ENST00000458038 CALCRP30988 508 aa18.67■□□□□ 0.58
CPNE1-220ENST00000458038 CHN2P52757 468 aa18.67■□□□□ 0.58
CPNE1-220ENST00000458038 CLDN17P56750 224 aa18.67■□□□□ 0.58
CPNE1-220ENST00000458038 ARF1P84077 181 aaKnown RBP18.67■□□□□ 0.58
CPNE1-220ENST00000458038 ZNF311Q5JNZ3 666 aa18.67■□□□□ 0.58
CPNE1-220ENST00000458038 NXNQ6DKJ4 435 aa18.67■□□□□ 0.58
CPNE1-220ENST00000458038 SLC25A36Q96CQ1 311 aa18.67■□□□□ 0.58
CPNE1-220ENST00000458038 TMEM19Q96HH6 336 aa18.67■□□□□ 0.58
CPNE1-220ENST00000458038 DOK1Q99704 481 aa18.67■□□□□ 0.58
CPNE1-220ENST00000458038 NELFAQ9H3P2 528 aa18.67■□□□□ 0.58
CPNE1-220ENST00000458038 RPS6KB2Q9UBS0 482 aa18.67■□□□□ 0.58
CPNE1-220ENST00000458038 CHST2Q9Y4C5 530 aa18.67■□□□□ 0.58
CPNE1-220ENST00000458038 hCG_2039718K7EN88 272 aa18.66■□□□□ 0.58
CPNE1-220ENST00000458038 AIM2O14862 343 aa18.66■□□□□ 0.58
CPNE1-220ENST00000458038 SNNO75324 88 aaPredicted RBP18.66■□□□□ 0.58
CPNE1-220ENST00000458038 TACSTD2P09758 323 aa18.66■□□□□ 0.58
CPNE1-220ENST00000458038 DAOP14920 347 aa18.66■□□□□ 0.58
CPNE1-220ENST00000458038 RPS5P46782 204 aaKnown RBP18.66■□□□□ 0.58
CPNE1-220ENST00000458038 HGFACQ04756 655 aa18.66■□□□□ 0.58
CPNE1-220ENST00000458038 EGR4Q05215 589 aa18.66■□□□□ 0.58
CPNE1-220ENST00000458038 FADDQ13158 208 aa18.66■□□□□ 0.58
CPNE1-220ENST00000458038 C1DQ13901 141 aaKnown RBP18.66■□□□□ 0.58
CPNE1-220ENST00000458038 FAM69AQ5T7M9 428 aa18.66■□□□□ 0.58
CPNE1-220ENST00000458038 ATG16L1Q676U5 607 aa18.66■□□□□ 0.58
CPNE1-220ENST00000458038 C6orf89Q6UWU4 347 aa18.66■□□□□ 0.58
CPNE1-220ENST00000458038 PIK3C3Q8NEB9 887 aa18.66■□□□□ 0.58
CPNE1-220ENST00000458038 MAELQ96JY0 434 aaKnown RBP18.66■□□□□ 0.58
CPNE1-220ENST00000458038 PTDSS2Q9BVG9 487 aa18.66■□□□□ 0.58
CPNE1-220ENST00000458038 GPR35Q9HC97 309 aa18.66■□□□□ 0.58
CPNE1-220ENST00000458038 SDR39U1Q9NRG7 319 aaPredicted RBP18.66■□□□□ 0.58
CPNE1-220ENST00000458038 THBS4P35443 961 aa18.65■□□□□ 0.58
CPNE1-220ENST00000458038 TUBA1BP68363 451 aa18.65■□□□□ 0.58
CPNE1-220ENST00000458038 TUBA4AP68366 448 aa18.65■□□□□ 0.58
CPNE1-220ENST00000458038 POU3F1Q03052 451 aaPredicted RBP18.65■□□□□ 0.58
CPNE1-220ENST00000458038 MFSD13AQ14CX5 517 aa18.65■□□□□ 0.58
CPNE1-220ENST00000458038 CEP85LQ5SZL2 805 aa18.65■□□□□ 0.58
CPNE1-220ENST00000458038 TUBA1AQ71U36 451 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms