RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 ANXA8L1Q5VT79 327 aa12.4□□□□□ -0.42
UPF3AP2-201ENST00000457924 SHQ1Q6PI26 577 aaKnown RBP12.4□□□□□ -0.42
UPF3AP2-201ENST00000457924 CREB3L2Q70SY1 520 aa12.4□□□□□ -0.42
UPF3AP2-201ENST00000457924 LINGO2Q7L985 606 aa12.4□□□□□ -0.42
UPF3AP2-201ENST00000457924 EPS8L3Q8TE67 593 aaKnown RBP12.4□□□□□ -0.42
UPF3AP2-201ENST00000457924 ZNF418Q8TF45 676 aaPredicted RBP12.4□□□□□ -0.42
UPF3AP2-201ENST00000457924 GCDHQ92947 438 aaPredicted RBP12.4□□□□□ -0.42
UPF3AP2-201ENST00000457924 NEURL3Q96EH8 262 aa12.4□□□□□ -0.42
UPF3AP2-201ENST00000457924 APOPT1Q96IL0 206 aa12.4□□□□□ -0.42
UPF3AP2-201ENST00000457924 ASIC5Q9NY37 505 aa12.4□□□□□ -0.42
UPF3AP2-201ENST00000457924 GRIP1Q9Y3R0 1128 aa12.4□□□□□ -0.42
UPF3AP2-201ENST00000457924 TMEM129A0AVI4 362 aa12.39□□□□□ -0.43
UPF3AP2-201ENST00000457924 PRAMEF27A3QJZ7 478 aa12.39□□□□□ -0.43
UPF3AP2-201ENST00000457924 HMGN4O00479 90 aa12.39□□□□□ -0.43
UPF3AP2-201ENST00000457924 CELA3BP08861 270 aa12.39□□□□□ -0.43
UPF3AP2-201ENST00000457924 CBR1P16152 277 aa12.39□□□□□ -0.43
UPF3AP2-201ENST00000457924 EGR1P18146 543 aa12.39□□□□□ -0.43
UPF3AP2-201ENST00000457924 ROR2Q01974 943 aaKnown RBP12.39□□□□□ -0.43
UPF3AP2-201ENST00000457924 SMU1Q2TAY7 513 aa12.39□□□□□ -0.43
UPF3AP2-201ENST00000457924 MRPL2Q5T653 305 aaKnown RBP12.39□□□□□ -0.43
UPF3AP2-201ENST00000457924 PRAMEF8Q5VWM4 474 aa12.39□□□□□ -0.43
UPF3AP2-201ENST00000457924 PRAMEF7Q5VXH5 474 aa12.39□□□□□ -0.43
UPF3AP2-201ENST00000457924 ZNF440Q8IYI8 595 aa12.39□□□□□ -0.43
UPF3AP2-201ENST00000457924 CDK20Q8IZL9 346 aa12.39□□□□□ -0.43
UPF3AP2-201ENST00000457924 ANKFN1Q8N957 763 aa12.39□□□□□ -0.43
UPF3AP2-201ENST00000457924 TRNT1Q96Q11 434 aaKnown RBP12.39□□□□□ -0.43
UPF3AP2-201ENST00000457924 SLC35A5Q9BS91 424 aa12.39□□□□□ -0.43
UPF3AP2-201ENST00000457924 LINC00470Q9BZP3 86 aa12.39□□□□□ -0.43
UPF3AP2-201ENST00000457924 DPY30Q9C005 99 aa12.39□□□□□ -0.43
UPF3AP2-201ENST00000457924 NELFAQ9H3P2 528 aa12.39□□□□□ -0.43
UPF3AP2-201ENST00000457924 TPK1Q9H3S4 243 aa12.39□□□□□ -0.43
UPF3AP2-201ENST00000457924 HIF1ANQ9NWT6 349 aa12.39□□□□□ -0.43
UPF3AP2-201ENST00000457924 MKS1Q9NXB0 559 aa12.39□□□□□ -0.43
UPF3AP2-201ENST00000457924 IGHV2OR16-5A0A0B4J2B6 119 aa12.38□□□□□ -0.43
UPF3AP2-201ENST00000457924 A8MVM7 634 aa12.38□□□□□ -0.43
UPF3AP2-201ENST00000457924 LYNX1G3V0Z9 82 aa12.38□□□□□ -0.43
UPF3AP2-201ENST00000457924 TRIM77I1YAP6 450 aa12.38□□□□□ -0.43
UPF3AP2-201ENST00000457924 DBIP07108 87 aaKnown RBP12.38□□□□□ -0.43
UPF3AP2-201ENST00000457924 LYNX1P0DP58 116 aa12.38□□□□□ -0.43
UPF3AP2-201ENST00000457924 ARRB2P32121 409 aa12.38□□□□□ -0.43
UPF3AP2-201ENST00000457924 ARR3P36575 388 aa12.38□□□□□ -0.43
UPF3AP2-201ENST00000457924 ANXA11P50995 505 aaKnown RBP12.38□□□□□ -0.43
UPF3AP2-201ENST00000457924 P2RY4P51582 365 aa12.38□□□□□ -0.43
UPF3AP2-201ENST00000457924 COPZ1P61923 177 aa12.38□□□□□ -0.43
UPF3AP2-201ENST00000457924 NPRL3Q12980 569 aa12.38□□□□□ -0.43
UPF3AP2-201ENST00000457924 BNIP2Q12982 314 aa12.38□□□□□ -0.43
UPF3AP2-201ENST00000457924 SNTB2Q13425 540 aaKnown RBP12.38□□□□□ -0.43
UPF3AP2-201ENST00000457924 DAG1Q14118 895 aa12.38□□□□□ -0.43
UPF3AP2-201ENST00000457924 SYPL1Q16563 259 aa12.38□□□□□ -0.43
UPF3AP2-201ENST00000457924 LRRC74BQ6ZQY2 392 aa12.38□□□□□ -0.43
UPF3AP2-201ENST00000457924 MYPOPQ86VE0 399 aaPredicted RBP12.38□□□□□ -0.43
UPF3AP2-201ENST00000457924 RNF130Q86XS8 419 aa12.38□□□□□ -0.43
UPF3AP2-201ENST00000457924 EPHX4Q8IUS5 362 aa12.38□□□□□ -0.43
UPF3AP2-201ENST00000457924 GSPT2Q8IYD1 628 aaKnown RBP12.38□□□□□ -0.43
UPF3AP2-201ENST00000457924 CADM2Q8N3J6 435 aa12.38□□□□□ -0.43
UPF3AP2-201ENST00000457924 IL17RDQ8NFM7 739 aa12.38□□□□□ -0.43
UPF3AP2-201ENST00000457924 FAM216AQ8WUB2 273 aa12.38□□□□□ -0.43
UPF3AP2-201ENST00000457924 TMEM186Q96B77 213 aa12.38□□□□□ -0.43
UPF3AP2-201ENST00000457924 RHOXF2Q9BQY4 288 aa12.38□□□□□ -0.43
UPF3AP2-201ENST00000457924 SLC38A1Q9H2H9 487 aa12.38□□□□□ -0.43
UPF3AP2-201ENST00000457924 MTHFD2LQ9H903 347 aaPredicted RBP12.38□□□□□ -0.43
UPF3AP2-201ENST00000457924 SLC17A7Q9P2U7 560 aa12.38□□□□□ -0.43
UPF3AP2-201ENST00000457924 PRDM4Q9UKN5 801 aa12.38□□□□□ -0.43
UPF3AP2-201ENST00000457924 PCDHB10Q9UN67 800 aa12.38□□□□□ -0.43
UPF3AP2-201ENST00000457924 RASD1Q9Y272 281 aa12.38□□□□□ -0.43
UPF3AP2-201ENST00000457924 CMAHPQ9Y471 501 aa12.38□□□□□ -0.43
UPF3AP2-201ENST00000457924 TMEM89A2RUT3 159 aa12.37□□□□□ -0.43
UPF3AP2-201ENST00000457924 FAM157AC9JC47 383 aa12.37□□□□□ -0.43
UPF3AP2-201ENST00000457924 KCNAB3O43448 404 aa12.37□□□□□ -0.43
UPF3AP2-201ENST00000457924 FRS3O43559 492 aa12.37□□□□□ -0.43
UPF3AP2-201ENST00000457924 RGS9O75916 674 aaPredicted RBP12.37□□□□□ -0.43
UPF3AP2-201ENST00000457924 CHRM4P08173 479 aa12.37□□□□□ -0.43
UPF3AP2-201ENST00000457924 IGFBP1P08833 259 aaPredicted RBP12.37□□□□□ -0.43
UPF3AP2-201ENST00000457924 RPS4Y1P22090 263 aaKnown RBP12.37□□□□□ -0.43
UPF3AP2-201ENST00000457924 GPR6P46095 362 aaPredicted RBP12.37□□□□□ -0.43
UPF3AP2-201ENST00000457924 CAPZA2P47755 286 aa12.37□□□□□ -0.43
UPF3AP2-201ENST00000457924 ARF1P84077 181 aaKnown RBP12.37□□□□□ -0.43
UPF3AP2-201ENST00000457924 POU3F1Q03052 451 aaPredicted RBP12.37□□□□□ -0.43
UPF3AP2-201ENST00000457924 C1orf140Q5VVS0 124 aa12.37□□□□□ -0.43
UPF3AP2-201ENST00000457924 KRT80Q6KB66 452 aa12.37□□□□□ -0.43
UPF3AP2-201ENST00000457924 PEX5LQ8IYB4 626 aa12.37□□□□□ -0.43
UPF3AP2-201ENST00000457924 CLDND2Q8NHS1 167 aa12.37□□□□□ -0.43
UPF3AP2-201ENST00000457924 TESCQ96BS2 214 aa12.37□□□□□ -0.43
UPF3AP2-201ENST00000457924 ZIM3Q96PE6 472 aa12.37□□□□□ -0.43
UPF3AP2-201ENST00000457924 NARFLQ9H6Q4 476 aa12.37□□□□□ -0.43
UPF3AP2-201ENST00000457924 LPAR2Q9HBW0 351 aa12.37□□□□□ -0.43
UPF3AP2-201ENST00000457924 CRLF2Q9HC73 371 aa12.37□□□□□ -0.43
UPF3AP2-201ENST00000457924 REV1Q9UBZ9 1251 aa12.37□□□□□ -0.43
UPF3AP2-201ENST00000457924 SPEF1Q9Y4P9 236 aa12.37□□□□□ -0.43
UPF3AP2-201ENST00000457924 RPL36A-HNRNPH2H7BZ11 118 aa12.36□□□□□ -0.43
UPF3AP2-201ENST00000457924 M0R233 179 aa12.36□□□□□ -0.43
UPF3AP2-201ENST00000457924 TFP02787 698 aa12.36□□□□□ -0.43
UPF3AP2-201ENST00000457924 MSMBP08118 114 aa12.36□□□□□ -0.43
UPF3AP2-201ENST00000457924 TFPTP0C1Z6 253 aa12.36□□□□□ -0.43
UPF3AP2-201ENST00000457924 GKN3PP0CG01 181 aa12.36□□□□□ -0.43
UPF3AP2-201ENST00000457924 SAGP10523 405 aaPredicted RBP12.36□□□□□ -0.43
UPF3AP2-201ENST00000457924 NR2F1P10589 423 aa12.36□□□□□ -0.43
UPF3AP2-201ENST00000457924 ZNF43P17038 809 aa12.36□□□□□ -0.43
UPF3AP2-201ENST00000457924 CLDN17P56750 224 aa12.36□□□□□ -0.43
UPF3AP2-201ENST00000457924 TXNL4AP83876 142 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms