RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 PXKQ7Z7A4 578 aa11.36□□□□□ -0.59
LINC00959-201ENST00000456581 RANBP3LQ86VV4 465 aaPredicted RBP11.36□□□□□ -0.59
LINC00959-201ENST00000456581 ZNF671Q8TAW3 534 aa11.36□□□□□ -0.59
LINC00959-201ENST00000456581 HLA-CQ95604 372 aa11.36□□□□□ -0.59
LINC00959-201ENST00000456581 PELI1Q96FA3 418 aa11.36□□□□□ -0.59
LINC00959-201ENST00000456581 DLL4Q9NR61 685 aa11.36□□□□□ -0.59
LINC00959-201ENST00000456581 CMC2Q9NRP2 79 aa11.36□□□□□ -0.59
LINC00959-201ENST00000456581 B3GNT2Q9NY97 397 aa11.36□□□□□ -0.59
LINC00959-201ENST00000456581 ST6GALNAC2Q9UJ37 374 aa11.36□□□□□ -0.59
LINC00959-201ENST00000456581 COPS3Q9UNS2 423 aa11.36□□□□□ -0.59
LINC00959-201ENST00000456581 FREM2Q5SZK8 3169 aa11.36□□□□□ -0.59
LINC00959-201ENST00000456581 FER1L5A0AVI2 2057 aa11.36□□□□□ -0.59
LINC00959-201ENST00000456581 PRR32B1ATL7 298 aa11.36□□□□□ -0.59
LINC00959-201ENST00000456581 SC5DO75845 299 aa11.36□□□□□ -0.59
LINC00959-201ENST00000456581 H2AFB2P0C5Z0 115 aa11.36□□□□□ -0.59
LINC00959-201ENST00000456581 HIST1H1CP16403 213 aaKnown RBP11.36□□□□□ -0.59
LINC00959-201ENST00000456581 CFL1P23528 166 aaKnown RBP11.36□□□□□ -0.59
LINC00959-201ENST00000456581 GDNFP39905 211 aa11.36□□□□□ -0.59
LINC00959-201ENST00000456581 PGDP52209 483 aa11.36□□□□□ -0.59
LINC00959-201ENST00000456581 RAB38P57729 211 aa11.36□□□□□ -0.59
LINC00959-201ENST00000456581 PUDPQ08623 228 aa11.36□□□□□ -0.59
LINC00959-201ENST00000456581 ZMYND11Q15326 602 aa11.36□□□□□ -0.59
LINC00959-201ENST00000456581 PRTGQ2VWP7 1150 aa11.36□□□□□ -0.59
LINC00959-201ENST00000456581 AMZ1Q400G9 498 aa11.36□□□□□ -0.59
LINC00959-201ENST00000456581 DMKNQ6E0U4 476 aaPredicted RBP11.36□□□□□ -0.59
LINC00959-201ENST00000456581 PYHIN1Q6K0P9 492 aa11.36□□□□□ -0.59
LINC00959-201ENST00000456581 TSSK4Q6SA08 328 aa11.36□□□□□ -0.59
LINC00959-201ENST00000456581 NHLRC1Q6VVB1 395 aa11.36□□□□□ -0.59
LINC00959-201ENST00000456581 CMTM4Q8IZR5 234 aa11.36□□□□□ -0.59
LINC00959-201ENST00000456581 SPERTQ8NA61 448 aa11.36□□□□□ -0.59
LINC00959-201ENST00000456581 PMEPA1Q969W9 287 aa11.36□□□□□ -0.59
LINC00959-201ENST00000456581 MMABQ96EY8 250 aaPredicted RBP11.36□□□□□ -0.59
LINC00959-201ENST00000456581 SPACA7Q96KW9 195 aa11.36□□□□□ -0.59
LINC00959-201ENST00000456581 GFI1Q99684 422 aa11.36□□□□□ -0.59
LINC00959-201ENST00000456581 ZNF350Q9GZX5 532 aa11.36□□□□□ -0.59
LINC00959-201ENST00000456581 ANKRD19PQ9H560 264 aa11.36□□□□□ -0.59
LINC00959-201ENST00000456581 ANKRD10Q9NXR5 420 aa11.36□□□□□ -0.59
LINC00959-201ENST00000456581 PRELID1Q9Y255 219 aa11.36□□□□□ -0.59
LINC00959-201ENST00000456581 FAM86C2PA6NEL3 165 aa11.35□□□□□ -0.59
LINC00959-201ENST00000456581 SHOXO15266 292 aa11.35□□□□□ -0.59
LINC00959-201ENST00000456581 OR7A10O76100 309 aa11.35□□□□□ -0.59
LINC00959-201ENST00000456581 AGR2O95994 175 aa11.35□□□□□ -0.59
LINC00959-201ENST00000456581 IGKV1D-16P01601 117 aa11.35□□□□□ -0.59
LINC00959-201ENST00000456581 S1PR1P21453 382 aa11.35□□□□□ -0.59
LINC00959-201ENST00000456581 SLC2A5P22732 501 aa11.35□□□□□ -0.59
LINC00959-201ENST00000456581 DNASE1P24855 282 aa11.35□□□□□ -0.59
LINC00959-201ENST00000456581 PTBP1P26599 531 aaKnown RBP eCLIP11.35□□□□□ -0.59
LINC00959-201ENST00000456581 ADH7P40394 386 aa11.35□□□□□ -0.59
LINC00959-201ENST00000456581 GDI2P50395 445 aaKnown RBP11.35□□□□□ -0.59
LINC00959-201ENST00000456581 FOXL2P58012 376 aa11.35□□□□□ -0.59
LINC00959-201ENST00000456581 RPS11P62280 158 aaKnown RBP eCLIP11.35□□□□□ -0.59
LINC00959-201ENST00000456581 PSG6Q00889 435 aa11.35□□□□□ -0.59
LINC00959-201ENST00000456581 SNTB2Q13425 540 aaKnown RBP11.35□□□□□ -0.59
LINC00959-201ENST00000456581 ODF4Q2M2E3 257 aa11.35□□□□□ -0.59
LINC00959-201ENST00000456581 BMP8AQ7Z5Y6 402 aa11.35□□□□□ -0.59
LINC00959-201ENST00000456581 GJD3Q8N144 294 aa11.35□□□□□ -0.59
LINC00959-201ENST00000456581 FAM98AQ8NCA5 519 aaKnown RBP11.35□□□□□ -0.59
LINC00959-201ENST00000456581 OR4C6Q8NH72 309 aa11.35□□□□□ -0.59
LINC00959-201ENST00000456581 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.35□□□□□ -0.59
LINC00959-201ENST00000456581 CTHRC1Q96CG8 243 aa11.35□□□□□ -0.59
LINC00959-201ENST00000456581 ERMAPQ96PL5 475 aaPredicted RBP11.35□□□□□ -0.59
LINC00959-201ENST00000456581 LMF1Q96S06 567 aa11.35□□□□□ -0.59
LINC00959-201ENST00000456581 TSPAN10Q9H1Z9 355 aaPredicted RBP11.35□□□□□ -0.59
LINC00959-201ENST00000456581 MCCC2Q9HCC0 563 aa11.35□□□□□ -0.59
LINC00959-201ENST00000456581 CLDN16Q9Y5I7 305 aa11.35□□□□□ -0.59
LINC00959-201ENST00000456581 RIIAD1A6NNX1 92 aa11.35□□□□□ -0.59
LINC00959-201ENST00000456581 TSPAN4O14817 238 aa11.35□□□□□ -0.59
LINC00959-201ENST00000456581 STX11O75558 287 aa11.35□□□□□ -0.59
LINC00959-201ENST00000456581 SIX6O95475 246 aa11.35□□□□□ -0.59
LINC00959-201ENST00000456581 FASLGP48023 281 aa11.35□□□□□ -0.59
LINC00959-201ENST00000456581 MAP2K6P52564 334 aa11.35□□□□□ -0.59
LINC00959-201ENST00000456581 OR1D5P58170 312 aa11.35□□□□□ -0.59
LINC00959-201ENST00000456581 FHL1Q13642 323 aa11.35□□□□□ -0.59
LINC00959-201ENST00000456581 MFSD13AQ14CX5 517 aa11.35□□□□□ -0.59
LINC00959-201ENST00000456581 AANATQ16613 207 aa11.35□□□□□ -0.59
LINC00959-201ENST00000456581 NLRC3Q7RTR2 1065 aa11.35□□□□□ -0.59
LINC00959-201ENST00000456581 MS4A15Q8N5U1 240 aa11.35□□□□□ -0.59
LINC00959-201ENST00000456581 DNAAF1Q8NEP3 725 aa11.35□□□□□ -0.59
LINC00959-201ENST00000456581 OR52B4Q8NGK2 314 aa11.35□□□□□ -0.59
LINC00959-201ENST00000456581 A0A1B0GTH9 108 aa11.34□□□□□ -0.59
LINC00959-201ENST00000456581 TCRBV16S1A1N1A0A5B0 115 aa11.34□□□□□ -0.59
LINC00959-201ENST00000456581 MCIDASD6RGH6 385 aa11.34□□□□□ -0.59
LINC00959-201ENST00000456581 TPOP07202 933 aa11.34□□□□□ -0.59
LINC00959-201ENST00000456581 RPS27P42677 84 aaKnown RBP11.34□□□□□ -0.59
LINC00959-201ENST00000456581 STX4Q12846 297 aa11.34□□□□□ -0.59
LINC00959-201ENST00000456581 GARNL3Q5VVW2 1013 aa11.34□□□□□ -0.59
LINC00959-201ENST00000456581 ZNF619Q8N2I2 560 aa11.34□□□□□ -0.59
LINC00959-201ENST00000456581 FTMTQ8N4E7 242 aa11.34□□□□□ -0.59
LINC00959-201ENST00000456581 CDRT4Q8N9R6 151 aa11.34□□□□□ -0.59
LINC00959-201ENST00000456581 GALNT11Q8NCW6 608 aa11.34□□□□□ -0.59
LINC00959-201ENST00000456581 OR11G2Q8NGC1 345 aa11.34□□□□□ -0.59
LINC00959-201ENST00000456581 OR6K6Q8NGW6 343 aa11.34□□□□□ -0.59
LINC00959-201ENST00000456581 OR52I2Q8NH67 350 aa11.34□□□□□ -0.59
LINC00959-201ENST00000456581 C1orf216Q8TAB5 229 aa11.34□□□□□ -0.59
LINC00959-201ENST00000456581 CXorf58Q96LI9 332 aa11.34□□□□□ -0.59
LINC00959-201ENST00000456581 LINC00052Q96N35 136 aa11.34□□□□□ -0.59
LINC00959-201ENST00000456581 TSSK2Q96PF2 358 aa11.34□□□□□ -0.59
LINC00959-201ENST00000456581 C20orf85Q9H1P6 137 aa11.34□□□□□ -0.59
LINC00959-201ENST00000456581 NOX4Q9NPH5 578 aa11.34□□□□□ -0.59
LINC00959-201ENST00000456581 NUBP2Q9Y5Y2 271 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms