RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 ATF1P18846 271 aa16.76■□□□□ 0.27
SEMA3B-209ENST00000456560 AQP2P41181 271 aa16.76■□□□□ 0.27
SEMA3B-209ENST00000456560 CDKN2AP42771 156 aaKnown RBP16.76■□□□□ 0.27
SEMA3B-209ENST00000456560 RAB25P57735 213 aa16.76■□□□□ 0.27
SEMA3B-209ENST00000456560 SMUG1Q53HV7 270 aa16.76■□□□□ 0.27
SEMA3B-209ENST00000456560 PYHIN1Q6K0P9 492 aa16.76■□□□□ 0.27
SEMA3B-209ENST00000456560 CBLN3Q6UW01 205 aa16.76■□□□□ 0.27
SEMA3B-209ENST00000456560 ZNF527Q8NB42 609 aa16.76■□□□□ 0.27
SEMA3B-209ENST00000456560 RPS4Y2Q8TD47 263 aa16.76■□□□□ 0.27
SEMA3B-209ENST00000456560 AKAP1Q92667 903 aaKnown RBP eCLIP16.76■□□□□ 0.275e-8■■■□□ 14.9
SEMA3B-209ENST00000456560 ZNF524Q96C55 264 aa16.76■□□□□ 0.27
SEMA3B-209ENST00000456560 HSPA12BQ96MM6 686 aa16.76■□□□□ 0.27
SEMA3B-209ENST00000456560 SLC46A1Q96NT5 459 aa16.76■□□□□ 0.27
SEMA3B-209ENST00000456560 PNO1Q9NRX1 252 aaKnown RBP16.76■□□□□ 0.27
SEMA3B-209ENST00000456560 CUTCQ9NTM9 273 aa16.76■□□□□ 0.27
SEMA3B-209ENST00000456560 GON4LQ3T8J9 2241 aa16.76■□□□□ 0.27
SEMA3B-209ENST00000456560 A0A1B0GVC2 190 aa16.76■□□□□ 0.27
SEMA3B-209ENST00000456560 A0A1W2PPK0 400 aa16.76■□□□□ 0.27
SEMA3B-209ENST00000456560 A6NIN4 97 aa16.76■□□□□ 0.27
SEMA3B-209ENST00000456560 ARL6IP5O75915 188 aa16.76■□□□□ 0.27
SEMA3B-209ENST00000456560 EPXP11678 715 aa16.76■□□□□ 0.27
SEMA3B-209ENST00000456560 AHCYP23526 432 aa16.76■□□□□ 0.27
SEMA3B-209ENST00000456560 MST1P26927 711 aa16.76■□□□□ 0.27
SEMA3B-209ENST00000456560 SLC6A1P30531 599 aa16.76■□□□□ 0.27
SEMA3B-209ENST00000456560 EVI2BP34910 448 aa16.76■□□□□ 0.27
SEMA3B-209ENST00000456560 GRK6P43250 576 aa16.76■□□□□ 0.27
SEMA3B-209ENST00000456560 HSF2Q03933 536 aa16.76■□□□□ 0.27
SEMA3B-209ENST00000456560 KCNAB1Q14722 419 aa16.76■□□□□ 0.27
SEMA3B-209ENST00000456560 DEFB133Q30KQ1 61 aa16.76■□□□□ 0.27
SEMA3B-209ENST00000456560 ZNF684Q5T5D7 378 aa16.76■□□□□ 0.27
SEMA3B-209ENST00000456560 NKAIN2Q5VXU1 208 aa16.76■□□□□ 0.27
SEMA3B-209ENST00000456560 OVCH1Q7RTY7 1134 aa16.76■□□□□ 0.27
SEMA3B-209ENST00000456560 FAM122BQ7Z309 247 aa16.76■□□□□ 0.27
SEMA3B-209ENST00000456560 TMEM151BQ8IW70 566 aa16.76■□□□□ 0.27
SEMA3B-209ENST00000456560 EXD3Q8N9H8 876 aa16.76■□□□□ 0.27
SEMA3B-209ENST00000456560 PHOSPHO1Q8TCT1 267 aa16.76■□□□□ 0.27
SEMA3B-209ENST00000456560 TTC9Q92623 222 aa16.76■□□□□ 0.27
SEMA3B-209ENST00000456560 Q96M85 177 aa16.76■□□□□ 0.27
SEMA3B-209ENST00000456560 MOGAT1Q96PD6 335 aa16.76■□□□□ 0.27
SEMA3B-209ENST00000456560 TRAF4Q9BUZ4 470 aaPredicted RBP16.76■□□□□ 0.27
SEMA3B-209ENST00000456560 ABRACLQ9P1F3 81 aa16.76■□□□□ 0.27
SEMA3B-209ENST00000456560 IGKV3D-11A0A0A0MRZ8 115 aa16.75■□□□□ 0.27
SEMA3B-209ENST00000456560 TRBV2A0A0J9YWF9 115 aa16.75■□□□□ 0.27
SEMA3B-209ENST00000456560 TEX13CA0A0J9YWL9 993 aa16.75■□□□□ 0.27
SEMA3B-209ENST00000456560 A0A1W2PQ72 361 aa16.75■□□□□ 0.27
SEMA3B-209ENST00000456560 NOS1APO75052 506 aaPredicted RBP16.75■□□□□ 0.27
SEMA3B-209ENST00000456560 APEHP13798 732 aaKnown RBP16.75■□□□□ 0.27
SEMA3B-209ENST00000456560 EDNRAP25101 427 aa16.75■□□□□ 0.27
SEMA3B-209ENST00000456560 PPM1FP49593 454 aaPredicted RBP16.75■□□□□ 0.27
SEMA3B-209ENST00000456560 SLC25A1P53007 311 aa16.75■□□□□ 0.27
SEMA3B-209ENST00000456560 EGR4Q05215 589 aa16.75■□□□□ 0.27
SEMA3B-209ENST00000456560 LTBQ06643 244 aa16.75■□□□□ 0.27
SEMA3B-209ENST00000456560 LYPD4Q6UWN0 246 aa16.75■□□□□ 0.27
SEMA3B-209ENST00000456560 SYT9Q86SS6 491 aa16.75■□□□□ 0.27
SEMA3B-209ENST00000456560 CLIP3Q96DZ5 547 aa16.75■□□□□ 0.27
SEMA3B-209ENST00000456560 MRPL48Q96GC5 212 aaKnown RBP16.75■□□□□ 0.27
SEMA3B-209ENST00000456560 ZDHHC12Q96GR4 267 aa16.75■□□□□ 0.27
SEMA3B-209ENST00000456560 SLC6A5Q9Y345 797 aa16.75■□□□□ 0.27
SEMA3B-209ENST00000456560 C4orf47A7E2U8 309 aa16.74■□□□□ 0.27
SEMA3B-209ENST00000456560 LMO7DNF2Z398 122 aa16.74■□□□□ 0.27
SEMA3B-209ENST00000456560 SCDO00767 359 aa16.74■□□□□ 0.27
SEMA3B-209ENST00000456560 FLRT2O43155 660 aa16.74■□□□□ 0.27
SEMA3B-209ENST00000456560 ZNF264O43296 627 aa16.74■□□□□ 0.27
SEMA3B-209ENST00000456560 IGKV3-11P04433 115 aa16.74■□□□□ 0.27
SEMA3B-209ENST00000456560 CD14P08571 375 aa16.74■□□□□ 0.27
SEMA3B-209ENST00000456560 HOXD11P31277 338 aaPredicted RBP16.74■□□□□ 0.27
SEMA3B-209ENST00000456560 PSMB10P40306 273 aa16.74■□□□□ 0.27
SEMA3B-209ENST00000456560 C14orf28Q4W4Y0 310 aa16.74■□□□□ 0.27
SEMA3B-209ENST00000456560 PLA1AQ53H76 456 aa16.74■□□□□ 0.27
SEMA3B-209ENST00000456560 HACD4Q5VWC8 232 aa16.74■□□□□ 0.27
SEMA3B-209ENST00000456560 LEG1Q6P5S2 330 aa16.74■□□□□ 0.27
SEMA3B-209ENST00000456560 HAVCR2Q8TDQ0 301 aa16.74■□□□□ 0.27
SEMA3B-209ENST00000456560 RNF166Q96A37 237 aaPredicted RBP16.74■□□□□ 0.27
SEMA3B-209ENST00000456560 CREB3L1Q96BA8 519 aa16.74■□□□□ 0.27
SEMA3B-209ENST00000456560 MMP25Q9NPA2 562 aa16.74■□□□□ 0.27
SEMA3B-209ENST00000456560 FRG2CA6NGY1 282 aa16.74■□□□□ 0.27
SEMA3B-209ENST00000456560 A8MUA0 341 aa16.74■□□□□ 0.27
SEMA3B-209ENST00000456560 PRR32B1ATL7 298 aa16.74■□□□□ 0.27
SEMA3B-209ENST00000456560 BLOC1S5-TXNDC5H3BN57 136 aa16.74■□□□□ 0.27
SEMA3B-209ENST00000456560 EEF1E1O43324 174 aaKnown RBP16.74■□□□□ 0.27
SEMA3B-209ENST00000456560 GPRIN2O60269 458 aa16.74■□□□□ 0.27
SEMA3B-209ENST00000456560 DDAH2O95865 285 aa16.74■□□□□ 0.27
SEMA3B-209ENST00000456560 ASAH2BP0C7U1 165 aa16.74■□□□□ 0.27
SEMA3B-209ENST00000456560 HPGDP15428 266 aa16.74■□□□□ 0.27
SEMA3B-209ENST00000456560 RORAP35398 523 aa16.74■□□□□ 0.27
SEMA3B-209ENST00000456560 OR1D4P47884 311 aa16.74■□□□□ 0.27
SEMA3B-209ENST00000456560 TTLL10Q6ZVT0 673 aa16.74■□□□□ 0.27
SEMA3B-209ENST00000456560 ASB18Q6ZVZ8 466 aa16.74■□□□□ 0.27
SEMA3B-209ENST00000456560 CCDC28AQ8IWP9 274 aa16.74■□□□□ 0.27
SEMA3B-209ENST00000456560 OR4D9Q8NGE8 314 aa16.74■□□□□ 0.27
SEMA3B-209ENST00000456560 OR6K6Q8NGW6 343 aa16.74■□□□□ 0.27
SEMA3B-209ENST00000456560 ZNF721Q8TF20 911 aa16.74■□□□□ 0.27
SEMA3B-209ENST00000456560 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.74■□□□□ 0.27
SEMA3B-209ENST00000456560 PHYHIPQ92561 330 aa16.74■□□□□ 0.27
SEMA3B-209ENST00000456560 TSLPQ969D9 159 aa16.74■□□□□ 0.27
SEMA3B-209ENST00000456560 ADIPOR1Q96A54 375 aa16.74■□□□□ 0.27
SEMA3B-209ENST00000456560 LCORQ96JN0 433 aaPredicted RBP16.74■□□□□ 0.27
SEMA3B-209ENST00000456560 OR14A2Q96R54 314 aa16.74■□□□□ 0.27
SEMA3B-209ENST00000456560 KLHDC3Q9BQ90 382 aa16.74■□□□□ 0.27
SEMA3B-209ENST00000456560 ALG12Q9BV10 488 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms