RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 FLNBO75369 2602 aaKnown RBP24.8■■□□□ 1.56
SMARCC1-203ENST00000454240 POU2F1P14859 743 aa24.79■■□□□ 1.56
SMARCC1-203ENST00000454240 ITGA2P17301 1181 aa24.79■■□□□ 1.56
SMARCC1-203ENST00000454240 SNTB1Q13884 538 aaKnown RBP24.79■■□□□ 1.56
SMARCC1-203ENST00000454240 EXOC3L2Q2M3D2 409 aa24.79■■□□□ 1.56
SMARCC1-203ENST00000454240 EPHX4Q8IUS5 362 aa24.79■■□□□ 1.56
SMARCC1-203ENST00000454240 ZNF385AQ96PM9 386 aaKnown RBP24.79■■□□□ 1.56
SMARCC1-203ENST00000454240 ANKRD19PQ9H560 264 aa24.79■■□□□ 1.56
SMARCC1-203ENST00000454240 IL1RAPQ9NPH3 570 aa24.79■■□□□ 1.56
SMARCC1-203ENST00000454240 NANSQ9NR45 359 aa24.79■■□□□ 1.56
SMARCC1-203ENST00000454240 PARPBPQ9NWS1 579 aa24.79■■□□□ 1.56
SMARCC1-203ENST00000454240 ZNF229Q9UJW7 825 aa24.79■■□□□ 1.56
SMARCC1-203ENST00000454240 ENO4A6NNW6 628 aa24.78■■□□□ 1.56
SMARCC1-203ENST00000454240 HNRNPRO43390 633 aaKnown RBP24.78■■□□□ 1.56
SMARCC1-203ENST00000454240 MRPL33O75394 65 aaKnown RBP24.78■■□□□ 1.56
SMARCC1-203ENST00000454240 PMS2P3Q13401 168 aa24.78■■□□□ 1.56
SMARCC1-203ENST00000454240 SLC46A3Q7Z3Q1 461 aa24.78■■□□□ 1.56
SMARCC1-203ENST00000454240 ZNF100Q8IYN0 542 aa24.78■■□□□ 1.56
SMARCC1-203ENST00000454240 GABRG1Q8N1C3 465 aa24.78■■□□□ 1.56
SMARCC1-203ENST00000454240 OR5J2Q8NH18 312 aa24.78■■□□□ 1.56
SMARCC1-203ENST00000454240 MCUR1Q96AQ8 359 aa24.78■■□□□ 1.56
SMARCC1-203ENST00000454240 C20orf141Q9NUB4 165 aa24.78■■□□□ 1.56
SMARCC1-203ENST00000454240 PRSS50Q9UI38 385 aa24.78■■□□□ 1.56
SMARCC1-203ENST00000454240 A0A1W2PRQ8 180 aa24.77■■□□□ 1.56
SMARCC1-203ENST00000454240 HTR3EA5X5Y0 456 aa24.77■■□□□ 1.56
SMARCC1-203ENST00000454240 PLPP3O14495 311 aa24.77■■□□□ 1.56
SMARCC1-203ENST00000454240 DIRAS1O95057 198 aa24.77■■□□□ 1.56
SMARCC1-203ENST00000454240 CNOT4O95628 575 aaKnown RBP24.77■■□□□ 1.56
SMARCC1-203ENST00000454240 ASAH2BP0C7U1 165 aa24.77■■□□□ 1.56
SMARCC1-203ENST00000454240 NQO1P15559 274 aaKnown RBP24.77■■□□□ 1.56
SMARCC1-203ENST00000454240 LSM11P83369 360 aaKnown RBP eCLIP24.77■■□□□ 1.56
SMARCC1-203ENST00000454240 DGCR6Q14129 220 aa24.77■■□□□ 1.56
SMARCC1-203ENST00000454240 ZC3HAV1Q7Z2W4 902 aaKnown RBP24.77■■□□□ 1.56
SMARCC1-203ENST00000454240 LRRC17Q8N6Y2 441 aa24.77■■□□□ 1.56
SMARCC1-203ENST00000454240 LIPHQ8WWY8 451 aa24.77■■□□□ 1.56
SMARCC1-203ENST00000454240 ACOT11Q8WXI4 607 aaPredicted RBP24.77■■□□□ 1.56
SMARCC1-203ENST00000454240 POP5Q969H6 163 aaKnown RBP24.77■■□□□ 1.56
SMARCC1-203ENST00000454240 APH1AQ96BI3 265 aa24.77■■□□□ 1.56
SMARCC1-203ENST00000454240 DHRS1Q96LJ7 313 aa24.77■■□□□ 1.56
SMARCC1-203ENST00000454240 PIP5K1AQ99755 562 aa24.77■■□□□ 1.56
SMARCC1-203ENST00000454240 SLC24A3Q9HC58 644 aa24.77■■□□□ 1.56
SMARCC1-203ENST00000454240 FANCFQ9NPI8 374 aa24.77■■□□□ 1.56
SMARCC1-203ENST00000454240 A0A087WUU8 490 aa24.76■■□□□ 1.55
SMARCC1-203ENST00000454240 HPRP00739 348 aa24.76■■□□□ 1.55
SMARCC1-203ENST00000454240 FABP3P05413 133 aa24.76■■□□□ 1.55
SMARCC1-203ENST00000454240 H1F0P07305 194 aaKnown RBP24.76■■□□□ 1.55
SMARCC1-203ENST00000454240 ZNF43P17038 809 aa24.76■■□□□ 1.55
SMARCC1-203ENST00000454240 UGT2B10P36537 528 aa24.76■■□□□ 1.55
SMARCC1-203ENST00000454240 NHLRC1Q6VVB1 395 aa24.76■■□□□ 1.55
SMARCC1-203ENST00000454240 STAC2Q6ZMT1 411 aa24.76■■□□□ 1.55
SMARCC1-203ENST00000454240 Q6ZT83 130 aa24.76■■□□□ 1.55
SMARCC1-203ENST00000454240 PIWIL3Q7Z3Z3 882 aaKnown RBP24.76■■□□□ 1.55
SMARCC1-203ENST00000454240 RNF113BQ8IZP6 322 aaKnown RBP24.76■■□□□ 1.55
SMARCC1-203ENST00000454240 SGTBQ96EQ0 304 aa24.76■■□□□ 1.55
SMARCC1-203ENST00000454240 SEPHS2Q99611 448 aa24.76■■□□□ 1.55
SMARCC1-203ENST00000454240 CELSR2Q9HCU4 2923 aa24.75■■□□□ 1.55
SMARCC1-203ENST00000454240 C16orf97H3BN30 126 aa24.75■■□□□ 1.55
SMARCC1-203ENST00000454240 PIP5K1CO60331 668 aa24.75■■□□□ 1.55
SMARCC1-203ENST00000454240 OR7A10O76100 309 aa24.75■■□□□ 1.55
SMARCC1-203ENST00000454240 STAMBPO95630 424 aa24.75■■□□□ 1.55
SMARCC1-203ENST00000454240 FUT1P19526 365 aa24.75■■□□□ 1.55
SMARCC1-203ENST00000454240 CCKARP32238 428 aa24.75■■□□□ 1.55
SMARCC1-203ENST00000454240 KIR2DL3P43628 341 aa24.75■■□□□ 1.55
SMARCC1-203ENST00000454240 PUDPQ08623 228 aa24.75■■□□□ 1.55
SMARCC1-203ENST00000454240 ZP4Q12836 540 aa24.75■■□□□ 1.55
SMARCC1-203ENST00000454240 CASP12Q6UXS9 341 aa24.75■■□□□ 1.55
SMARCC1-203ENST00000454240 AAED1Q7RTV5 226 aa24.75■■□□□ 1.55
SMARCC1-203ENST00000454240 ZDHHC21Q8IVQ6 265 aa24.75■■□□□ 1.55
SMARCC1-203ENST00000454240 SLC7A13Q8TCU3 470 aa24.75■■□□□ 1.55
SMARCC1-203ENST00000454240 MARVELD3Q96A59 401 aa24.75■■□□□ 1.55
SMARCC1-203ENST00000454240 LRGUKQ96M69 825 aa24.75■■□□□ 1.55
SMARCC1-203ENST00000454240 MAGIXQ9H6Y5 334 aa24.75■■□□□ 1.55
SMARCC1-203ENST00000454240 TAS2R5Q9NYW4 299 aa24.75■■□□□ 1.55
SMARCC1-203ENST00000454240 TUBAL3A6NHL2 446 aa24.74■■□□□ 1.55
SMARCC1-203ENST00000454240 HIST1H2ABP04908 130 aa24.74■■□□□ 1.55
SMARCC1-203ENST00000454240 PSMB1P20618 241 aaKnown RBP24.74■■□□□ 1.55
SMARCC1-203ENST00000454240 PRKCDQ05655 676 aa24.74■■□□□ 1.55
SMARCC1-203ENST00000454240 FBXW9Q5XUX1 488 aa24.74■■□□□ 1.55
SMARCC1-203ENST00000454240 MBOAT2Q6ZWT7 520 aa24.74■■□□□ 1.55
SMARCC1-203ENST00000454240 HIST3H2AQ7L7L0 130 aa24.74■■□□□ 1.55
SMARCC1-203ENST00000454240 PXKQ7Z7A4 578 aa24.74■■□□□ 1.55
SMARCC1-203ENST00000454240 LINC01560Q8TB33 94 aa24.74■■□□□ 1.55
SMARCC1-203ENST00000454240 HIST1H2ACQ93077 130 aa24.74■■□□□ 1.55
SMARCC1-203ENST00000454240 BPIFA2Q96DR5 249 aa24.74■■□□□ 1.55
SMARCC1-203ENST00000454240 KCNN3Q9UGI6 736 aa24.74■■□□□ 1.55
SMARCC1-203ENST00000454240 POMPQ9Y244 141 aa24.74■■□□□ 1.55
SMARCC1-203ENST00000454240 TRAF3IP2O43734 574 aaPredicted RBP24.73■■□□□ 1.55
SMARCC1-203ENST00000454240 ADAP00813 363 aa24.73■■□□□ 1.55
SMARCC1-203ENST00000454240 ADORA3P0DMS8 318 aa24.73■■□□□ 1.55
SMARCC1-203ENST00000454240 UMPSP11172 480 aa24.73■■□□□ 1.55
SMARCC1-203ENST00000454240 IFI30P13284 250 aa24.73■■□□□ 1.55
SMARCC1-203ENST00000454240 HLA-DOBP13765 273 aa24.73■■□□□ 1.55
SMARCC1-203ENST00000454240 MAGEA2P43356 314 aa24.73■■□□□ 1.55
SMARCC1-203ENST00000454240 C1DQ13901 141 aaKnown RBP24.73■■□□□ 1.55
SMARCC1-203ENST00000454240 P2RY6Q15077 328 aa24.73■■□□□ 1.55
SMARCC1-203ENST00000454240 PODNL1Q6PEZ8 512 aa24.73■■□□□ 1.55
SMARCC1-203ENST00000454240 TBPL2Q6SJ96 375 aa24.73■■□□□ 1.55
SMARCC1-203ENST00000454240 ZNF730Q6ZMV8 503 aa24.73■■□□□ 1.55
SMARCC1-203ENST00000454240 CXorf67Q86X51 503 aaPredicted RBP24.73■■□□□ 1.55
SMARCC1-203ENST00000454240 UEVLDQ8IX04 471 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms