RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 WDR31Q8NA23 367 aa12.79□□□□□ -0.36
HSPG2-207ENST00000453796 PCYOX1LQ8NBM8 494 aa12.79□□□□□ -0.36
HSPG2-207ENST00000453796 ADPRHL1Q8NDY3 354 aa12.79□□□□□ -0.36
HSPG2-207ENST00000453796 KBTBD8Q8NFY9 601 aa12.79□□□□□ -0.36
HSPG2-207ENST00000453796 OR52N5Q8NH56 324 aa12.79□□□□□ -0.36
HSPG2-207ENST00000453796 ZNF417Q8TAU3 575 aa12.79□□□□□ -0.36
HSPG2-207ENST00000453796 NEUROG1Q92886 237 aa12.79□□□□□ -0.36
HSPG2-207ENST00000453796 OXGR1Q96P68 337 aa12.79□□□□□ -0.36
HSPG2-207ENST00000453796 ZNF587Q96SQ5 575 aaPredicted RBP12.79□□□□□ -0.36
HSPG2-207ENST00000453796 ECSITQ9BQ95 431 aa12.79□□□□□ -0.36
HSPG2-207ENST00000453796 PCDHAC1Q9H158 963 aa12.79□□□□□ -0.36
HSPG2-207ENST00000453796 B3GALT5Q9Y2C3 310 aa12.79□□□□□ -0.36
HSPG2-207ENST00000453796 FLNAP21333 2647 aaKnown RBP12.78□□□□□ -0.36
HSPG2-207ENST00000453796 SHISA9B4DS77 424 aa12.78□□□□□ -0.36
HSPG2-207ENST00000453796 MS4A18H0YCH9 400 aa12.78□□□□□ -0.36
HSPG2-207ENST00000453796 CHP2O43745 196 aa12.78□□□□□ -0.36
HSPG2-207ENST00000453796 SMPD2O60906 423 aa12.78□□□□□ -0.36
HSPG2-207ENST00000453796 ZNF432O94892 652 aa12.78□□□□□ -0.36
HSPG2-207ENST00000453796 DANCRP0C864 163 aa12.78□□□□□ -0.36
HSPG2-207ENST00000453796 PAX1P15863 534 aa12.78□□□□□ -0.36
HSPG2-207ENST00000453796 GTF2E2P29084 291 aaKnown RBP12.78□□□□□ -0.36
HSPG2-207ENST00000453796 SLC25A3Q00325 362 aa12.78□□□□□ -0.36
HSPG2-207ENST00000453796 LGALS3BPQ08380 585 aa12.78□□□□□ -0.36
HSPG2-207ENST00000453796 MS4A18Q3C1V0 323 aa12.78□□□□□ -0.36
HSPG2-207ENST00000453796 SHEQ5VZ18 495 aa12.78□□□□□ -0.36
HSPG2-207ENST00000453796 NHLRC1Q6VVB1 395 aa12.78□□□□□ -0.36
HSPG2-207ENST00000453796 H1FNTQ75WM6 255 aaPredicted RBP12.78□□□□□ -0.36
HSPG2-207ENST00000453796 C17orf78Q8N4C9 275 aa12.78□□□□□ -0.36
HSPG2-207ENST00000453796 POU5F2Q8N7G0 328 aa12.78□□□□□ -0.36
HSPG2-207ENST00000453796 RP9Q8TA86 221 aaKnown RBP12.78□□□□□ -0.36
HSPG2-207ENST00000453796 VANGL1Q8TAA9 524 aaPredicted RBP12.78□□□□□ -0.36
HSPG2-207ENST00000453796 ADAMTS16Q8TE57 1224 aa12.78□□□□□ -0.36
HSPG2-207ENST00000453796 RASSF5Q8WWW0 418 aa12.78□□□□□ -0.36
HSPG2-207ENST00000453796 RCN3Q96D15 328 aa12.78□□□□□ -0.36
HSPG2-207ENST00000453796 MOGAT1Q96PD6 335 aa12.78□□□□□ -0.36
HSPG2-207ENST00000453796 EPYCQ99645 322 aa12.78□□□□□ -0.36
HSPG2-207ENST00000453796 GSX2Q9BZM3 304 aa12.78□□□□□ -0.36
HSPG2-207ENST00000453796 LINC00470Q9BZP3 86 aa12.78□□□□□ -0.36
HSPG2-207ENST00000453796 SLC17A5Q9NRA2 495 aa12.78□□□□□ -0.36
HSPG2-207ENST00000453796 GID8Q9NWU2 228 aa12.78□□□□□ -0.36
HSPG2-207ENST00000453796 RCE1Q9Y256 329 aa12.78□□□□□ -0.36
HSPG2-207ENST00000453796 A0A1W2PR80 420 aa12.77□□□□□ -0.37
HSPG2-207ENST00000453796 CPSF4LA6NMK7 179 aaKnown RBP12.77□□□□□ -0.37
HSPG2-207ENST00000453796 FAM220BPB1ANY3 271 aa12.77□□□□□ -0.37
HSPG2-207ENST00000453796 CLOCKO15516 846 aa12.77□□□□□ -0.37
HSPG2-207ENST00000453796 TRAF3IP2O43734 574 aaPredicted RBP12.77□□□□□ -0.37
HSPG2-207ENST00000453796 TMCC2O75069 709 aa12.77□□□□□ -0.37
HSPG2-207ENST00000453796 ZNF43P17038 809 aa12.77□□□□□ -0.37
HSPG2-207ENST00000453796 PTNP21246 168 aa12.77□□□□□ -0.37
HSPG2-207ENST00000453796 CBLP22681 906 aa12.77□□□□□ -0.37
HSPG2-207ENST00000453796 CLDN17P56750 224 aa12.77□□□□□ -0.37
HSPG2-207ENST00000453796 MFSD13AQ14CX5 517 aa12.77□□□□□ -0.37
HSPG2-207ENST00000453796 C1QTNF12Q5T7M4 302 aa12.77□□□□□ -0.37
HSPG2-207ENST00000453796 C8orf82Q6P1X6 216 aaPredicted RBP12.77□□□□□ -0.37
HSPG2-207ENST00000453796 NIPAL3Q6P499 406 aa12.77□□□□□ -0.37
HSPG2-207ENST00000453796 ERICH5Q6P6B1 374 aa12.77□□□□□ -0.37
HSPG2-207ENST00000453796 ABHD12BQ7Z5M8 362 aaPredicted RBP12.77□□□□□ -0.37
HSPG2-207ENST00000453796 SCAIQ8N9R8 606 aa12.77□□□□□ -0.37
HSPG2-207ENST00000453796 SLC26A7Q8TE54 656 aa12.77□□□□□ -0.37
HSPG2-207ENST00000453796 FBXW5Q969U6 566 aa12.77□□□□□ -0.37
HSPG2-207ENST00000453796 ZNF426Q9BUY5 554 aa12.77□□□□□ -0.37
HSPG2-207ENST00000453796 ZNF701Q9NV72 531 aaPredicted RBP12.77□□□□□ -0.37
HSPG2-207ENST00000453796 SELENONQ9NZV5 590 aa12.77□□□□□ -0.37
HSPG2-207ENST00000453796 AMDHD2Q9Y303 409 aa12.77□□□□□ -0.37
HSPG2-207ENST00000453796 CORINQ9Y5Q5 1042 aa12.77□□□□□ -0.37
HSPG2-207ENST00000453796 TRAPPC13A5PLN9 417 aa12.76□□□□□ -0.37
HSPG2-207ENST00000453796 OR6C65A6NJZ3 312 aa12.76□□□□□ -0.37
HSPG2-207ENST00000453796 LRRN3E7EW58 273 aa12.76□□□□□ -0.37
HSPG2-207ENST00000453796 OVOL3O00110 214 aa12.76□□□□□ -0.37
HSPG2-207ENST00000453796 ABCD4O14678 606 aa12.76□□□□□ -0.37
HSPG2-207ENST00000453796 UPK3AO75631 287 aa12.76□□□□□ -0.37
HSPG2-207ENST00000453796 HPRP00739 348 aa12.76□□□□□ -0.37
HSPG2-207ENST00000453796 SOD3P08294 240 aa12.76□□□□□ -0.37
HSPG2-207ENST00000453796 COX4I1P13073 169 aa12.76□□□□□ -0.37
HSPG2-207ENST00000453796 PTH2RP49190 550 aa12.76□□□□□ -0.37
HSPG2-207ENST00000453796 TGFBR3Q03167 851 aa12.76□□□□□ -0.37
HSPG2-207ENST00000453796 PGGHGQ32M88 737 aa12.76□□□□□ -0.37
HSPG2-207ENST00000453796 PRSS57Q6UWY2 283 aa12.76□□□□□ -0.37
HSPG2-207ENST00000453796 TREML1Q86YW5 311 aa12.76□□□□□ -0.37
HSPG2-207ENST00000453796 TMEM123Q8N131 208 aa12.76□□□□□ -0.37
HSPG2-207ENST00000453796 RNF217Q8TC41 542 aa12.76□□□□□ -0.37
HSPG2-207ENST00000453796 TMEM171Q8WVE6 324 aa12.76□□□□□ -0.37
HSPG2-207ENST00000453796 ALKBH3Q96Q83 286 aaPredicted RBP12.76□□□□□ -0.37
HSPG2-207ENST00000453796 PRSS27Q9BQR3 290 aa12.76□□□□□ -0.37
HSPG2-207ENST00000453796 NELFAQ9H3P2 528 aa12.76□□□□□ -0.37
HSPG2-207ENST00000453796 CMTM6Q9NX76 183 aa12.76□□□□□ -0.37
HSPG2-207ENST00000453796 MRPL39Q9NYK5 338 aaKnown RBP12.76□□□□□ -0.37
HSPG2-207ENST00000453796 SLC7A7Q9UM01 511 aa12.76□□□□□ -0.37
HSPG2-207ENST00000453796 ZNF587BE7ETH6 402 aa12.75□□□□□ -0.37
HSPG2-207ENST00000453796 RPL36A-HNRNPH2H7BZ11 118 aa12.75□□□□□ -0.37
HSPG2-207ENST00000453796 ARHGEF9O43307 516 aa12.75□□□□□ -0.37
HSPG2-207ENST00000453796 CCDC22O60826 627 aa12.75□□□□□ -0.37
HSPG2-207ENST00000453796 MT-ATP6P00846 226 aa12.75□□□□□ -0.37
HSPG2-207ENST00000453796 HLA-DOBP13765 273 aa12.75□□□□□ -0.37
HSPG2-207ENST00000453796 TNFRSF1BP20333 461 aa12.75□□□□□ -0.37
HSPG2-207ENST00000453796 PTAFRP25105 342 aa12.75□□□□□ -0.37
HSPG2-207ENST00000453796 CD40P25942 277 aa12.75□□□□□ -0.37
HSPG2-207ENST00000453796 ZNF83P51522 516 aa12.75□□□□□ -0.37
HSPG2-207ENST00000453796 SEC24CP53992 1094 aa12.75□□□□□ -0.37
HSPG2-207ENST00000453796 SPOCK1Q08629 439 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms