RNA–Protein interactions for RNA: ENST00000453310.5

RBM39-219, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,068 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-219ENST00000453310 OR9K2Q8NGE7 335 aa13.94□□□□□ -0.18
RBM39-219ENST00000453310 OR2T29Q8NH02 315 aa13.94□□□□□ -0.18
RBM39-219ENST00000453310 OR5J2Q8NH18 312 aa13.94□□□□□ -0.18
RBM39-219ENST00000453310 SLCO4A1Q96BD0 722 aa13.94□□□□□ -0.18
RBM39-219ENST00000453310 STARD4Q96DR4 205 aa13.94□□□□□ -0.18
RBM39-219ENST00000453310 BPIFA2Q96DR5 249 aa13.94□□□□□ -0.18
RBM39-219ENST00000453310 ALPK1Q96QP1 1244 aa13.94□□□□□ -0.18
RBM39-219ENST00000453310 SF3B5Q9BWJ5 86 aaKnown RBP13.94□□□□□ -0.18
RBM39-219ENST00000453310 UCK2Q9BZX2 261 aa13.94□□□□□ -0.18
RBM39-219ENST00000453310 PIGMQ9H3S5 423 aa13.94□□□□□ -0.18
RBM39-219ENST00000453310 YY1AP1Q9H869 796 aa13.94□□□□□ -0.18
RBM39-219ENST00000453310 LYVE1Q9Y5Y7 322 aa13.94□□□□□ -0.18
RBM39-219ENST00000453310 SPTBN1Q01082 2364 aaKnown RBP13.93□□□□□ -0.18
RBM39-219ENST00000453310 CACNA1CQ13936 2221 aa13.93□□□□□ -0.18
RBM39-219ENST00000453310 SH3PXD2BA1X283 911 aa13.93□□□□□ -0.18
RBM39-219ENST00000453310 TNFRSF11BO00300 401 aa13.93□□□□□ -0.18
RBM39-219ENST00000453310 GPR171O14626 319 aa13.93□□□□□ -0.18
RBM39-219ENST00000453310 SMNDC1O75940 238 aaKnown RBP eCLIP13.93□□□□□ -0.18
RBM39-219ENST00000453310 CST1P01037 141 aa13.93□□□□□ -0.18
RBM39-219ENST00000453310 HIST1H2ABP04908 130 aa13.93□□□□□ -0.18
RBM39-219ENST00000453310 FUT1P19526 365 aa13.93□□□□□ -0.18
RBM39-219ENST00000453310 MAKP20794 623 aa13.93□□□□□ -0.18
RBM39-219ENST00000453310 LIMS1P48059 325 aa13.93□□□□□ -0.18
RBM39-219ENST00000453310 IL1RL1Q01638 556 aa13.93□□□□□ -0.18
RBM39-219ENST00000453310 PUDPQ08623 228 aa13.93□□□□□ -0.18
RBM39-219ENST00000453310 KPNB1Q14974 876 aaKnown RBP13.93□□□□□ -0.18
RBM39-219ENST00000453310 POU4F3Q15319 338 aa13.93□□□□□ -0.18
RBM39-219ENST00000453310 EXOC3L2Q2M3D2 409 aa13.93□□□□□ -0.18
RBM39-219ENST00000453310 HIST3H2AQ7L7L0 130 aa13.93□□□□□ -0.18
RBM39-219ENST00000453310 NUFIP2Q7Z417 695 aaKnown RBP13.93□□□□□ -0.18
RBM39-219ENST00000453310 NANOGNBQ7Z5D8 188 aa13.93□□□□□ -0.18
RBM39-219ENST00000453310 MEX3DQ86XN8 651 aaKnown RBP13.93□□□□□ -0.18
RBM39-219ENST00000453310 KDM8Q8N371 416 aa13.93□□□□□ -0.18
RBM39-219ENST00000453310 OR4K5Q8NGD3 323 aa13.93□□□□□ -0.18
RBM39-219ENST00000453310 LIPHQ8WWY8 451 aa13.93□□□□□ -0.18
RBM39-219ENST00000453310 HIST1H2ACQ93077 130 aa13.93□□□□□ -0.18
RBM39-219ENST00000453310 ZNF775Q96BV0 537 aaPredicted RBP13.93□□□□□ -0.18
RBM39-219ENST00000453310 C12orf49Q9H741 205 aa13.93□□□□□ -0.18
RBM39-219ENST00000453310 REEP1Q9H902 201 aa13.93□□□□□ -0.18
RBM39-219ENST00000453310 VNN3Q9NY84 501 aa13.93□□□□□ -0.18
RBM39-219ENST00000453310 B3GAT1Q9P2W7 334 aa13.93□□□□□ -0.18
RBM39-219ENST00000453310 TMCC3Q9ULS5 477 aa13.93□□□□□ -0.18
RBM39-219ENST00000453310 PROCRQ9UNN8 238 aa13.93□□□□□ -0.18
RBM39-219ENST00000453310 TMEM5Q9Y2B1 443 aa13.93□□□□□ -0.18
RBM39-219ENST00000453310 SAMHD1Q9Y3Z3 626 aaKnown RBP13.93□□□□□ -0.18
RBM39-219ENST00000453310 FLVCR1Q9Y5Y0 555 aa13.93□□□□□ -0.18
RBM39-219ENST00000453310 COL12A1Q99715 3063 aa13.93□□□□□ -0.18
RBM39-219ENST00000453310 NKX2-6A6NCS4 301 aa13.92□□□□□ -0.18
RBM39-219ENST00000453310 MS4A18H0YCH9 400 aa13.92□□□□□ -0.18
RBM39-219ENST00000453310 PLPP3O14495 311 aa13.92□□□□□ -0.18
RBM39-219ENST00000453310 OR6A2O95222 327 aa13.92□□□□□ -0.18
RBM39-219ENST00000453310 CGAP01215 116 aa13.92□□□□□ -0.18
RBM39-219ENST00000453310 SAGP10523 405 aaPredicted RBP13.92□□□□□ -0.18
RBM39-219ENST00000453310 CD8BP10966 210 aa13.92□□□□□ -0.18
RBM39-219ENST00000453310 GPR4P46093 362 aa13.92□□□□□ -0.18
RBM39-219ENST00000453310 OMPP47874 163 aa13.92□□□□□ -0.18
RBM39-219ENST00000453310 HMGA2P52926 109 aa13.92□□□□□ -0.18
RBM39-219ENST00000453310 ACTR3P61158 418 aa13.92□□□□□ -0.18
RBM39-219ENST00000453310 MS4A18Q3C1V0 323 aa13.92□□□□□ -0.18
RBM39-219ENST00000453310 GALNT5Q7Z7M9 940 aa13.92□□□□□ -0.18
RBM39-219ENST00000453310 CDK20Q8IZL9 346 aa13.92□□□□□ -0.18
RBM39-219ENST00000453310 OR4C15Q8NGM1 316 aa13.92□□□□□ -0.18
RBM39-219ENST00000453310 DUS3LQ96G46 650 aaKnown RBP13.92□□□□□ -0.18
RBM39-219ENST00000453310 FAM46AQ96IP4 442 aaKnown RBP13.92□□□□□ -0.18
RBM39-219ENST00000453310 OXGR1Q96P68 337 aa13.92□□□□□ -0.18
RBM39-219ENST00000453310 OPN3Q9H1Y3 402 aaPredicted RBP13.92□□□□□ -0.18
RBM39-219ENST00000453310 KRCC1Q9NPI7 259 aaPredicted RBP13.92□□□□□ -0.18
RBM39-219ENST00000453310 KCNJ16Q9NPI9 418 aa13.92□□□□□ -0.18
RBM39-219ENST00000453310 JKAMPQ9P055 326 aa13.92□□□□□ -0.18
RBM39-219ENST00000453310 NOSIPQ9Y314 301 aaKnown RBP13.92□□□□□ -0.18
RBM39-219ENST00000453310 U3KQV3 271 aa13.92□□□□□ -0.18
RBM39-219ENST00000453310 LOC102725191A0A1B0GVB3 256 aa13.91□□□□□ -0.18
RBM39-219ENST00000453310 EFCAB9A8MZ26 197 aa13.91□□□□□ -0.18
RBM39-219ENST00000453310 MSTNO14793 375 aa13.91□□□□□ -0.18
RBM39-219ENST00000453310 OR10H3O60404 316 aa13.91□□□□□ -0.18
RBM39-219ENST00000453310 HPRP00739 348 aa13.91□□□□□ -0.18
RBM39-219ENST00000453310 ADORA3P0DMS8 318 aa13.91□□□□□ -0.18
RBM39-219ENST00000453310 ZNF43P17038 809 aa13.91□□□□□ -0.18
RBM39-219ENST00000453310 AHCYP23526 432 aa13.91□□□□□ -0.18
RBM39-219ENST00000453310 ASCL1P50553 236 aa13.91□□□□□ -0.18
RBM39-219ENST00000453310 PPP1R8Q12972 351 aaKnown RBP13.91□□□□□ -0.18
RBM39-219ENST00000453310 TMPRSS11FQ6ZWK6 438 aa13.91□□□□□ -0.18
RBM39-219ENST00000453310 CREB3L2Q70SY1 520 aa13.91□□□□□ -0.18
RBM39-219ENST00000453310 LUZP2Q86TE4 346 aa13.91□□□□□ -0.18
RBM39-219ENST00000453310 EPHX4Q8IUS5 362 aa13.91□□□□□ -0.18
RBM39-219ENST00000453310 TMEM45BQ96B21 275 aa13.91□□□□□ -0.18
RBM39-219ENST00000453310 ZNF385AQ96PM9 386 aaKnown RBP13.91□□□□□ -0.18
RBM39-219ENST00000453310 FANCFQ9NPI8 374 aa13.91□□□□□ -0.18
RBM39-219ENST00000453310 PLSCR4Q9NRQ2 329 aa13.91□□□□□ -0.18
RBM39-219ENST00000453310 ERICH4A6NGS2 130 aa13.9□□□□□ -0.18
RBM39-219ENST00000453310 A8MXE2 369 aa13.9□□□□□ -0.18
RBM39-219ENST00000453310 C11orf98E9PRG8 122 aa13.9□□□□□ -0.18
RBM39-219ENST00000453310 BLOC1S5-TXNDC5H3BN57 136 aa13.9□□□□□ -0.18
RBM39-219ENST00000453310 GNGT2O14610 69 aa13.9□□□□□ -0.18
RBM39-219ENST00000453310 CDC42EP2O14613 210 aa13.9□□□□□ -0.18
RBM39-219ENST00000453310 TRAF3IP2O43734 574 aaPredicted RBP13.9□□□□□ -0.18
RBM39-219ENST00000453310 TIPRLO75663 272 aa13.9□□□□□ -0.18
RBM39-219ENST00000453310 NTF4P34130 210 aa13.9□□□□□ -0.18
RBM39-219ENST00000453310 IFNGR2P38484 337 aa13.9□□□□□ -0.18
RBM39-219ENST00000453310 OR3A2P47893 321 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms