RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 TRBV11-1A0A0K0K1C0 115 aa10.7□□□□□ -0.7
VTA1-203ENST00000452973 TFECO14948 347 aaPredicted RBP10.7□□□□□ -0.7
VTA1-203ENST00000452973 ARPC3O15145 178 aa10.7□□□□□ -0.7
VTA1-203ENST00000452973 ALOX12BO75342 701 aa10.7□□□□□ -0.7
VTA1-203ENST00000452973 OR2T7P0C7T2 308 aa10.7□□□□□ -0.7
VTA1-203ENST00000452973 EDNRAP25101 427 aa10.7□□□□□ -0.7
VTA1-203ENST00000452973 PNLIPRP2P54317 469 aa10.7□□□□□ -0.7
VTA1-203ENST00000452973 P2RY14Q15391 338 aa10.7□□□□□ -0.7
VTA1-203ENST00000452973 LCN1P1Q5VSP4 162 aa10.7□□□□□ -0.7
VTA1-203ENST00000452973 RABEPKQ7Z6M1 372 aa10.7□□□□□ -0.7
VTA1-203ENST00000452973 APCDD1LQ8NCL9 501 aa10.7□□□□□ -0.7
VTA1-203ENST00000452973 PLPP5Q8NEB5 264 aa10.7□□□□□ -0.7
VTA1-203ENST00000452973 OR4D9Q8NGE8 314 aa10.7□□□□□ -0.7
VTA1-203ENST00000452973 OR2T27Q8NH04 317 aa10.7□□□□□ -0.7
VTA1-203ENST00000452973 NECAB3Q96P71 396 aaPredicted RBP10.7□□□□□ -0.7
VTA1-203ENST00000452973 NPAS1Q99742 590 aa10.7□□□□□ -0.7
VTA1-203ENST00000452973 CRB3Q9BUF7 120 aa10.7□□□□□ -0.7
VTA1-203ENST00000452973 CCDC32Q9BV29 185 aa10.7□□□□□ -0.7
VTA1-203ENST00000452973 SP140LQ9H930 580 aa10.7□□□□□ -0.7
VTA1-203ENST00000452973 TBC1D24Q9ULP9 559 aa10.7□□□□□ -0.7
VTA1-203ENST00000452973 SNPHO15079 494 aa10.69□□□□□ -0.7
VTA1-203ENST00000452973 PLPP2O43688 288 aa10.69□□□□□ -0.7
VTA1-203ENST00000452973 SUSD5O60279 629 aa10.69□□□□□ -0.7
VTA1-203ENST00000452973 ASAH2BP0C7U1 165 aa10.69□□□□□ -0.7
VTA1-203ENST00000452973 F8A1P23610 371 aa10.69□□□□□ -0.7
VTA1-203ENST00000452973 MAGEB1P43366 347 aa10.69□□□□□ -0.7
VTA1-203ENST00000452973 SLC6A8P48029 635 aa10.69□□□□□ -0.7
VTA1-203ENST00000452973 BDH1Q02338 343 aa10.69□□□□□ -0.7
VTA1-203ENST00000452973 CBFBQ13951 182 aa10.69□□□□□ -0.7
VTA1-203ENST00000452973 COL28A1Q2UY09 1125 aa10.69□□□□□ -0.7
VTA1-203ENST00000452973 TRIM61Q5EBN2 209 aa10.69□□□□□ -0.7
VTA1-203ENST00000452973 YOD1Q5VVQ6 348 aaPredicted RBP10.69□□□□□ -0.7
VTA1-203ENST00000452973 NEDD4LQ96PU5 975 aa10.69□□□□□ -0.7
VTA1-203ENST00000452973 COQ7Q99807 217 aa10.69□□□□□ -0.7
VTA1-203ENST00000452973 ADAM19Q9H013 955 aa10.69□□□□□ -0.7
VTA1-203ENST00000452973 SYT4Q9H2B2 425 aa10.69□□□□□ -0.7
VTA1-203ENST00000452973 ING1Q9UK53 422 aaPredicted RBP10.69□□□□□ -0.7
VTA1-203ENST00000452973 POLHQ9Y253 713 aa10.69□□□□□ -0.7
VTA1-203ENST00000452973 TMEM72A0PK05 275 aa10.69□□□□□ -0.7
VTA1-203ENST00000452973 PTTG1O95997 202 aa10.69□□□□□ -0.7
VTA1-203ENST00000452973 SLC2A2P11168 524 aaPredicted RBP10.69□□□□□ -0.7
VTA1-203ENST00000452973 GBX2P52951 348 aaPredicted RBP10.69□□□□□ -0.7
VTA1-203ENST00000452973 AGAP7PQ5VUJ5 663 aa10.69□□□□□ -0.7
VTA1-203ENST00000452973 THAP4Q8WY91 577 aa10.69□□□□□ -0.7
VTA1-203ENST00000452973 TMCO6Q96DC7 493 aa10.69□□□□□ -0.7
VTA1-203ENST00000452973 TSPAN32Q96QS1 320 aa10.69□□□□□ -0.7
VTA1-203ENST00000452973 MED11Q9P086 117 aa10.69□□□□□ -0.7
VTA1-203ENST00000452973 NCDNQ9UBB6 729 aa10.69□□□□□ -0.7
VTA1-203ENST00000452973 FREM2Q5SZK8 3169 aa10.69□□□□□ -0.7
VTA1-203ENST00000452973 A0A087WV48 116 aa10.69□□□□□ -0.7
VTA1-203ENST00000452973 TMED7-TICAM2A0A0A6YYA0 188 aa10.69□□□□□ -0.7
VTA1-203ENST00000452973 TOX3O15405 576 aaPredicted RBP10.69□□□□□ -0.7
VTA1-203ENST00000452973 PAHP00439 452 aa10.69□□□□□ -0.7
VTA1-203ENST00000452973 HLA-DQA2P01906 255 aa10.69□□□□□ -0.7
VTA1-203ENST00000452973 MYL9P24844 172 aa10.69□□□□□ -0.7
VTA1-203ENST00000452973 SDHAP31040 664 aa10.69□□□□□ -0.7
VTA1-203ENST00000452973 GDI2P50395 445 aaKnown RBP10.69□□□□□ -0.7
VTA1-203ENST00000452973 SIRPAP78324 504 aa10.69□□□□□ -0.7
VTA1-203ENST00000452973 KRR1Q13601 381 aaKnown RBP10.69□□□□□ -0.7
VTA1-203ENST00000452973 FAM122BQ7Z309 247 aa10.69□□□□□ -0.7
VTA1-203ENST00000452973 POMGNT2Q8NAT1 580 aa10.69□□□□□ -0.7
VTA1-203ENST00000452973 ITFG2Q969R8 447 aa10.69□□□□□ -0.7
VTA1-203ENST00000452973 PPP1R14BQ96C90 147 aa10.69□□□□□ -0.7
VTA1-203ENST00000452973 PGLYRP3Q96LB9 341 aa10.69□□□□□ -0.7
VTA1-203ENST00000452973 WDFY2Q96P53 400 aa10.69□□□□□ -0.7
VTA1-203ENST00000452973 GFM1Q96RP9 751 aaKnown RBP10.69□□□□□ -0.7
VTA1-203ENST00000452973 CPNE5Q9HCH3 593 aa10.69□□□□□ -0.7
VTA1-203ENST00000452973 RXFP3Q9NSD7 469 aa10.69□□□□□ -0.7
VTA1-203ENST00000452973 TMED7Q9Y3B3 224 aa10.69□□□□□ -0.7
VTA1-203ENST00000452973 TEX51A0A1B0GUA7 166 aa10.68□□□□□ -0.7
VTA1-203ENST00000452973 SHISA8B8ZZ34 492 aa10.68□□□□□ -0.7
VTA1-203ENST00000452973 TO15178 435 aa10.68□□□□□ -0.7
VTA1-203ENST00000452973 OPN1LWP04000 364 aa10.68□□□□□ -0.7
VTA1-203ENST00000452973 EIF2B2P49770 351 aaKnown RBP10.68□□□□□ -0.7
VTA1-203ENST00000452973 P2RX1P51575 399 aa10.68□□□□□ -0.7
VTA1-203ENST00000452973 TAS2R43P59537 309 aa10.68□□□□□ -0.7
VTA1-203ENST00000452973 GPR50Q13585 617 aa10.68□□□□□ -0.7
VTA1-203ENST00000452973 ODF4Q2M2E3 257 aa10.68□□□□□ -0.7
VTA1-203ENST00000452973 GLYR1Q49A26 553 aaPredicted RBP10.68□□□□□ -0.7
VTA1-203ENST00000452973 MESTQ5EB52 335 aa10.68□□□□□ -0.7
VTA1-203ENST00000452973 PM20D2Q8IYS1 436 aa10.68□□□□□ -0.7
VTA1-203ENST00000452973 SLC43A2Q8N370 569 aa10.68□□□□□ -0.7
VTA1-203ENST00000452973 OR14A2Q96R54 314 aa10.68□□□□□ -0.7
VTA1-203ENST00000452973 TAS2R10Q9NYW0 307 aa10.68□□□□□ -0.7
VTA1-203ENST00000452973 PCDHGB7Q9Y5F8 929 aa10.68□□□□□ -0.7
VTA1-203ENST00000452973 C19orf67A6NJJ6 358 aa10.68□□□□□ -0.7
VTA1-203ENST00000452973 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.68□□□□□ -0.7
VTA1-203ENST00000452973 MEN1O00255 615 aa10.68□□□□□ -0.7
VTA1-203ENST00000452973 FADS1O60427 444 aa10.68□□□□□ -0.7
VTA1-203ENST00000452973 EIF4E2O60573 245 aaKnown RBP10.68□□□□□ -0.7
VTA1-203ENST00000452973 GLCEO94923 617 aa10.68□□□□□ -0.7
VTA1-203ENST00000452973 OR8G3PP0DMU2 310 aa10.68□□□□□ -0.7
VTA1-203ENST00000452973 ACTA2P62736 377 aa10.68□□□□□ -0.7
VTA1-203ENST00000452973 PPP3R1P63098 170 aa10.68□□□□□ -0.7
VTA1-203ENST00000452973 ACTG2P63267 376 aa10.68□□□□□ -0.7
VTA1-203ENST00000452973 SLC6A19Q695T7 634 aa10.68□□□□□ -0.7
VTA1-203ENST00000452973 ADGRG3Q86Y34 549 aa10.68□□□□□ -0.7
VTA1-203ENST00000452973 OR6V1Q8N148 313 aa10.68□□□□□ -0.7
VTA1-203ENST00000452973 ZNF441Q8N8Z8 693 aa10.68□□□□□ -0.7
VTA1-203ENST00000452973 C7orf57Q8NEG2 295 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms